CircNet

General Information

circRNA Basic Information

CircID	chr8:47879522\|47879658
Strand	-
CircType	exon
Host Gene	ENSG00000253729.6;
Algorism	CIRI2;
Sequence	CGCGGAGTTCCTGGAGGAAATTCCCTGGACTGCATGGGGAAGTGAGCAACGATGAGCTGCTCCAGAACACGTCTAAGTTCCTCCAGACTGCCTCCAGTGAGGCTGGTGAAGAATGGAAGAAGAGTGACAGCTTGGCC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr8:47879522\|47879658	hsa-miR-197-5p	0	0	1
chr8:47879522\|47879658	hsa-miR-197-3p	0	0	1
chr8:47879522\|47879658	hsa-miR-412-5p	0	0	1
chr8:47879522\|47879658	hsa-miR-412-3p	0	0	1
chr8:47879522\|47879658	hsa-miR-622	0	1	1
chr8:47879522\|47879658	hsa-miR-646	0	0	1
chr8:47879522\|47879658	hsa-miR-650	0	0	1
chr8:47879522\|47879658	hsa-miR-668-5p	0	0	1
chr8:47879522\|47879658	hsa-miR-668-3p	0	0	1
chr8:47879522\|47879658	hsa-miR-765	0	0	1
chr8:47879522\|47879658	hsa-miR-665	0	0	1
chr8:47879522\|47879658	hsa-miR-873-5p	0	0	1
chr8:47879522\|47879658	hsa-miR-873-3p	0	0	1
chr8:47879522\|47879658	hsa-miR-1178-5p	0	0	1
chr8:47879522\|47879658	hsa-miR-1178-3p	0	0	1
chr8:47879522\|47879658	hsa-miR-1226-5p	0	0	1
chr8:47879522\|47879658	hsa-miR-1226-3p	0	0	1
chr8:47879522\|47879658	hsa-miR-1238-5p	0	0	1
chr8:47879522\|47879658	hsa-miR-1238-3p	0	0	1
chr8:47879522\|47879658	hsa-miR-1299	0	0	1
chr8:47879522\|47879658	hsa-miR-1827	0	0	1
chr8:47879522\|47879658	hsa-miR-455-3p	0	1	1
chr8:47879522\|47879658	hsa-miR-516b	0	0	1
chr8:47879522\|47879658	hsa-miR-3612	0	1	0
chr8:47879522\|47879658	hsa-miR-766-5p	0	1	0
chr8:47879522\|47879658	hsa-miR-3928-3p	0	1	0
chr8:47879522\|47879658	hsa-miR-486-3p	1	0	0
chr8:47879522\|47879658	hsa-miR-6743-3p	1	0	0
chr8:47879522\|47879658	hsa-miR-4778-3p	0	1	0
chr8:47879522\|47879658	hsa-miR-653-3p	0	1	0
chr8:47879522\|47879658	hsa-miR-6773-3p	0	1	0
chr8:47879522\|47879658	hsa-miR-6755-3p	0	1	0
chr8:47879522\|47879658	hsa-miR-6754-3p	0	1	0
chr8:47879522\|47879658	hsa-miR-4691-5p	0	1	0
chr8:47879522\|47879658	hsa-miR-549a-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr8:47879522\|47879658
ORF Type	ORF1
Protein Length	28
Nucleotide Length	84
Protein Sequence	MSCSRTRLSSSRLPPVRLVKNGRRVTAW
Nucleotide Sequence	ATGAGCTGCTCCAGAACACGTCTAAGTTCCTCCAGACTGCCTCCAGTGAGGCTGGTGAAGAATGGAAGAAGAGTGACAGCTTGG

CircID	chr8:47879522\|47879658
ORF Type	ORF2
Protein Length	36
Nucleotide Length	108
Protein Sequence	MHGEVSNDELLQNTSKFLQTASSEAGEEWKKSDSLA
Nucleotide Sequence	CTGCATGGGGAAGTGAGCAACGATGAGCTGCTCCAGAACACGTCTAAGTTCCTCCAGACTGCCTCCAGTGAGGCTGGTGAAGAATGGAAGAAGAGTGACAGCTTGGCC

CircID	chr8:47879522\|47879658
ORF Type	ORF3
Protein Length	28
Nucleotide Length	84
Protein Sequence	MEELRRVLEQLIVAHFPMQSREFPPGTP
Nucleotide Sequence	CTGGAGGAACTTAGACGTGTTCTGGAGCAGCTCATCGTTGCTCACTTCCCCATGCAGTCCAGGGAATTTCCTCCAGGAACTCCG

CircID	chr8:47879522\|47879658
ORF Type	ORF4
Protein Length	43
Nucleotide Length	129
Protein Sequence	MSLFFHSSPASLEAVWRNLDVFWSSSSLLTSPCSPGNFLQELR
Nucleotide Sequence	CTGTCACTCTTCTTCCATTCTTCACCAGCCTCACTGGAGGCAGTCTGGAGGAACTTAGACGTGTTCTGGAGCAGCTCATCGTTGCTCACTTCCCCATGCAGTCCAGGGAATTTCCTCCAGGAACTCCGC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information