CircRNA Information

General Information
circRNA Basic Information
CircID chr8:63211922|63212061
Strand +
CircType exon
Host Gene ENSG00000185728.15;
Algorism CIRI2;
Sequence CCCAGGCTCTCTCCCTTTTGGTCCCCACAGTTAAGAGACATTCAGTTGGTTGTGCTTGAGACAACCTGTGATAATTTCATTCAGAGGAAAAATATTTTGCAATATAATGACAGACCAAGAAGGAAGAGAAGGTGGGTGCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:63211922|63212061 hsa-miR-25-5p 0 0 1
chr8:63211922|63212061 hsa-miR-25-3p 0 0 1
chr8:63211922|63212061 hsa-miR-32-5p 0 0 1
chr8:63211922|63212061 hsa-miR-32-3p 0 0 1
chr8:63211922|63212061 hsa-miR-185-5p 0 0 1
chr8:63211922|63212061 hsa-miR-185-3p 0 0 1
chr8:63211922|63212061 hsa-miR-363-5p 0 0 1
chr8:63211922|63212061 hsa-miR-363-3p 0 0 1
chr8:63211922|63212061 hsa-miR-367-5p 0 0 1
chr8:63211922|63212061 hsa-miR-367-3p 0 0 1
chr8:63211922|63212061 hsa-miR-527 0 0 1
chr8:63211922|63212061 hsa-miR-92b-5p 0 0 1
chr8:63211922|63212061 hsa-miR-92b-3p 0 0 1
chr8:63211922|63212061 hsa-miR-593-5p 0 0 1
chr8:63211922|63212061 hsa-miR-593-3p 0 0 1
chr8:63211922|63212061 hsa-miR-616-5p 0 0 1
chr8:63211922|63212061 hsa-miR-616-3p 0 0 1
chr8:63211922|63212061 hsa-miR-661 0 0 1
chr8:63211922|63212061 hsa-miR-942-5p 0 0 1
chr8:63211922|63212061 hsa-miR-942-3p 0 0 1
chr8:63211922|63212061 hsa-miR-1236-5p 0 0 1
chr8:63211922|63212061 hsa-miR-1236-3p 0 0 1
chr8:63211922|63212061 hsa-miR-1237-5p 0 0 1
chr8:63211922|63212061 hsa-miR-1237-3p 0 0 1
chr8:63211922|63212061 hsa-miR-1238-5p 0 0 1
chr8:63211922|63212061 hsa-miR-1238-3p 0 0 1
chr8:63211922|63212061 hsa-miR-1248 0 0 1
chr8:63211922|63212061 hsa-miR-513c-5p 0 0 1
chr8:63211922|63212061 hsa-miR-513c-3p 0 0 1
chr8:63211922|63212061 hsa-miR-491-5p 0 0 1
chr8:63211922|63212061 hsa-miR-1224-3p 1 1 1
chr8:63211922|63212061 hsa-miR-513a-5p 0 0 1
chr8:63211922|63212061 hsa-miR-518a-5p 0 0 1
chr8:63211922|63212061 hsa-miR-220c 0 0 1
chr8:63211922|63212061 hsa-miR-453 0 0 1
chr8:63211922|63212061 hsa-miR-92a 0 0 1
chr8:63211922|63212061 hsa-miR-1183 1 0 0
chr8:63211922|63212061 hsa-miR-4290 1 0 0
chr8:63211922|63212061 hsa-miR-8085 0 1 0
chr8:63211922|63212061 hsa-miR-8089 1 0 0
chr8:63211922|63212061 hsa-miR-6857-5p 1 0 0
chr8:63211922|63212061 hsa-miR-6742-5p 1 0 0
chr8:63211922|63212061 hsa-miR-6796-5p 1 1 0
chr8:63211922|63212061 hsa-miR-6868-3p 1 1 0
chr8:63211922|63212061 hsa-miR-6827-5p 1 0 0
chr8:63211922|63212061 hsa-miR-6810-5p 1 1 0
chr8:63211922|63212061 hsa-miR-6786-5p 1 0 0
chr8:63211922|63212061 hsa-miR-6809-3p 0 1 0
chr8:63211922|63212061 hsa-miR-4724-5p 1 0 0
chr8:63211922|63212061 hsa-miR-6880-3p 1 0 0
chr8:63211922|63212061 hsa-miR-3144-5p 1 1 0
chr8:63211922|63212061 hsa-miR-320a-5p 1 1 0
chr8:63211922|63212061 hsa-miR-328-5p 1 0 0
chr8:63211922|63212061 hsa-miR-4749-5p 1 0 0
chr8:63211922|63212061 hsa-miR-6795-5p 1 0 0
chr8:63211922|63212061 hsa-miR-6887-5p 1 0 0
chr8:63211922|63212061 hsa-miR-6845-5p 1 0 0
chr8:63211922|63212061 hsa-miR-4667-5p 0 1 0
chr8:63211922|63212061 hsa-miR-6762-5p 1 0 0
chr8:63211922|63212061 hsa-miR-6511a-3p 1 0 0
chr8:63211922|63212061 hsa-miR-7114-3p 1 0 0
chr8:63211922|63212061 hsa-miR-10399-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr8:63211922|63212061
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence MVVLETTCDNFIQRKNILQYNDRPRRKRRWV
Nucleotide Sequence TTGGTTGTGCTTGAGACAACCTGTGATAATTTCATTCAGAGGAAAAATATTTTGCAATATAATGACAGACCAAGAAGGAAGAGAAGGTGGGTG
CircID chr8:63211922|63212061
ORF Type ORF2
Protein Length 30
Nucleotide Length 90
Protein Sequence MCLRQPVIISFRGKIFCNIMTDQEGREGGC
Nucleotide Sequence TTGTGCTTGAGACAACCTGTGATAATTTCATTCAGAGGAAAAATATTTTGCAATATAATGACAGACCAAGAAGGAAGAGAAGGTGGGTGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab