CircRNA Information

General Information
circRNA Basic Information
CircID chr8:70213903|70216764
Strand -
CircType exon
Host Gene ENSG00000140396.12;
Algorism find_circ;CIRI2;DCC;
Sequence TTGCTGATATGTGTTCAAGATGAGTGGGATGGGAGAAAATACCTCTGACCCCTCCAGGGCAGAGACAAGAAAGCGCAAGGAATGTCCTGACCAACTTGGACCCAGCCCCAAAAGGAACACTGAAAAACGTAATCGTGAACAGGAAAATAAATATATAGAAGAACTTGCAGAGTTGATTTTTGCAAATTTTAATGATATAGACAACTTTAACTTCAAACCTGACAAATGTGCAATCTTAAAAGAAACTGTGAAGCAAATTCGTCAGATCAAAGAACAAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:70213903|70216764 hsa-miR-19a-5p 0 0 1
chr8:70213903|70216764 hsa-miR-19a-3p 0 0 1
chr8:70213903|70216764 hsa-miR-141-5p 0 0 1
chr8:70213903|70216764 hsa-miR-141-3p 0 0 1
chr8:70213903|70216764 hsa-miR-206 0 0 1
chr8:70213903|70216764 hsa-miR-200a-5p 0 0 1
chr8:70213903|70216764 hsa-miR-200a-3p 0 0 1
chr8:70213903|70216764 hsa-miR-518f-5p 0 0 1
chr8:70213903|70216764 hsa-miR-518f-3p 0 0 1
chr8:70213903|70216764 hsa-miR-518b 0 0 1
chr8:70213903|70216764 hsa-miR-518c-5p 0 0 1
chr8:70213903|70216764 hsa-miR-518c-3p 0 0 1
chr8:70213903|70216764 hsa-miR-527 0 0 1
chr8:70213903|70216764 hsa-miR-507 0 0 1
chr8:70213903|70216764 hsa-miR-557 0 0 1
chr8:70213903|70216764 hsa-miR-613 0 0 1
chr8:70213903|70216764 hsa-miR-890 0 0 1
chr8:70213903|70216764 hsa-miR-190b-5p 0 0 1
chr8:70213903|70216764 hsa-miR-190b-3p 0 0 1
chr8:70213903|70216764 hsa-miR-548g-5p 0 0 1
chr8:70213903|70216764 hsa-miR-548g-3p 0 0 1
chr8:70213903|70216764 hsa-miR-129-5p 0 0 1
chr8:70213903|70216764 hsa-miR-10a-3p 0 1 1
chr8:70213903|70216764 hsa-miR-875-5p 0 1 1
chr8:70213903|70216764 hsa-miR-628-5p 0 0 1
chr8:70213903|70216764 hsa-miR-518a-5p 0 0 1
chr8:70213903|70216764 hsa-miR-518a-3p 0 0 1
chr8:70213903|70216764 hsa-miR-518d-3p 0 0 1
chr8:70213903|70216764 hsa-miR-450b-5p 0 0 1
chr8:70213903|70216764 hsa-miR-590-3p 0 0 1
chr8:70213903|70216764 hsa-miR-19b 0 0 1
chr8:70213903|70216764 hsa-miR-1 0 0 1
chr8:70213903|70216764 hsa-miR-219-1-3p 0 0 1
chr8:70213903|70216764 hsa-miR-549 0 0 1
chr8:70213903|70216764 hsa-miR-190 0 0 1
chr8:70213903|70216764 hsa-miR-762 1 0 0
chr8:70213903|70216764 hsa-miR-298 1 0 0
chr8:70213903|70216764 hsa-miR-711 0 1 0
chr8:70213903|70216764 hsa-miR-3125 0 1 0
chr8:70213903|70216764 hsa-miR-3132 1 0 0
chr8:70213903|70216764 hsa-miR-3138 1 1 0
chr8:70213903|70216764 hsa-miR-4481 0 1 0
chr8:70213903|70216764 hsa-miR-4651 1 0 0
chr8:70213903|70216764 hsa-miR-4654 1 1 0
chr8:70213903|70216764 hsa-miR-4656 1 0 0
chr8:70213903|70216764 hsa-miR-4739 1 0 0
chr8:70213903|70216764 hsa-miR-5090 1 0 0
chr8:70213903|70216764 hsa-miR-6088 1 0 0
chr8:70213903|70216764 hsa-miR-8077 1 0 0
chr8:70213903|70216764 hsa-miR-12120 0 1 0
chr8:70213903|70216764 hsa-miR-4433b-3p 1 0 0
chr8:70213903|70216764 hsa-miR-6728-5p 1 1 0
chr8:70213903|70216764 hsa-miR-6757-5p 1 0 0
chr8:70213903|70216764 hsa-miR-6721-5p 1 0 0
chr8:70213903|70216764 hsa-miR-197-5p 1 0 0
chr8:70213903|70216764 hsa-miR-8069 1 0 0
chr8:70213903|70216764 hsa-miR-7845-5p 0 1 0
chr8:70213903|70216764 hsa-miR-6742-5p 1 0 0
chr8:70213903|70216764 hsa-miR-6793-5p 1 0 0
chr8:70213903|70216764 hsa-miR-6796-5p 1 0 0
chr8:70213903|70216764 hsa-miR-2467-3p 1 1 0
chr8:70213903|70216764 hsa-miR-6782-5p 1 0 0
chr8:70213903|70216764 hsa-miR-6715b-3p 0 1 0
chr8:70213903|70216764 hsa-miR-6753-5p 1 1 0
chr8:70213903|70216764 hsa-miR-30c-2-3p 0 1 0
chr8:70213903|70216764 hsa-miR-149-3p 1 0 0
chr8:70213903|70216764 hsa-miR-345-5p 0 1 0
chr8:70213903|70216764 hsa-miR-519d-5p 0 1 0
chr8:70213903|70216764 hsa-miR-7113-5p 1 0 0
chr8:70213903|70216764 hsa-miR-1296-3p 1 0 0
chr8:70213903|70216764 hsa-miR-5699-5p 0 1 0
chr8:70213903|70216764 hsa-miR-4714-5p 0 1 0
chr8:70213903|70216764 hsa-miR-1233-5p 1 0 0
chr8:70213903|70216764 hsa-miR-4763-3p 1 0 0
chr8:70213903|70216764 hsa-miR-6778-5p 1 0 0
chr8:70213903|70216764 hsa-miR-6812-5p 1 0 0
chr8:70213903|70216764 hsa-miR-6775-5p 1 1 0
chr8:70213903|70216764 hsa-miR-6737-5p 1 0 0
chr8:70213903|70216764 hsa-miR-6743-5p 1 0 0
chr8:70213903|70216764 hsa-miR-6756-5p 1 0 0
chr8:70213903|70216764 hsa-miR-6819-5p 1 0 0
chr8:70213903|70216764 hsa-miR-6842-5p 1 0 0
chr8:70213903|70216764 hsa-miR-6780a-5p 0 1 0
chr8:70213903|70216764 hsa-miR-6797-5p 1 0 0
chr8:70213903|70216764 hsa-miR-6879-5p 1 1 0
chr8:70213903|70216764 hsa-miR-3620-5p 1 0 0
chr8:70213903|70216764 hsa-miR-4728-5p 1 0 0
chr8:70213903|70216764 hsa-miR-5196-5p 1 0 0
chr8:70213903|70216764 hsa-miR-4685-5p 1 1 0
chr8:70213903|70216764 hsa-miR-4745-5p 1 0 0
chr8:70213903|70216764 hsa-miR-6735-5p 1 1 0
chr8:70213903|70216764 hsa-miR-4436b-3p 0 1 0
chr8:70213903|70216764 hsa-miR-1238-5p 1 1 0
chr8:70213903|70216764 hsa-miR-4758-5p 1 1 0
chr8:70213903|70216764 hsa-miR-4769-5p 1 1 0
chr8:70213903|70216764 hsa-miR-30c-1-3p 0 1 0
chr8:70213903|70216764 hsa-miR-7843-5p 1 1 0
chr8:70213903|70216764 hsa-miR-6766-5p 0 1 0
chr8:70213903|70216764 hsa-miR-769-3p 1 0 0
chr8:70213903|70216764 hsa-miR-6529-5p 1 0 0
chr8:70213903|70216764 hsa-miR-6837-5p 1 1 0
chr8:70213903|70216764 hsa-miR-11181-5p 0 1 0
chr8:70213903|70216764 hsa-miR-3059-3p 0 1 0
chr8:70213903|70216764 hsa-miR-130a-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr8:70213903|70216764
ORF Type ORF1
Protein Length 56
Nucleotide Length 171
Protein Sequence MQKSTLQVLLYIYFPVHDYVFQCSFWGWVQVGQDIPCAFLSLPWRGQRYFLPSHSS
Nucleotide Sequence TTGCAAAAATCAACTCTGCAAGTTCTTCTATATATTTATTTTCCTGTTCACGATTACGTTTTTCAGTGTTCCTTTTGGGGCTGGGTCCAAGTTGGTCAGGACATTCCTTGCGCTTTCTTGTCTCTGCCCTGGAGGGGTCAGAGGTATTTTCTCCCATCCCACTCATCTTGA

CircID chr8:70213903|70216764
ORF Type ORF2
Protein Length 47
Nucleotide Length 141
Protein Sequence MFTITFFSVPFGAGSKLVRTFLALSCLCPGGVRGIFSHPTHLEHISA
Nucleotide Sequence CTGTTCACGATTACGTTTTTCAGTGTTCCTTTTGGGGCTGGGTCCAAGTTGGTCAGGACATTCCTTGCGCTTTCTTGTCTCTGCCCTGGAGGGGTCAGAGGTATTTTCTCCCATCCCACTCATCTTGAACACATATCAGCA

CircID chr8:70213903|70216764
ORF Type ORF3
Protein Length 75
Nucleotide Length 225
Protein Sequence MSGLKLKLSISLKFAKINSASSSIYLFSCSRLRFSVFLLGLGPSWSGHSLRFLVSALEGSEVFSPIPLILNTYQQ
Nucleotide Sequence TTGTCAGGTTTGAAGTTAAAGTTGTCTATATCATTAAAATTTGCAAAAATCAACTCTGCAAGTTCTTCTATATATTTATTTTCCTGTTCACGATTACGTTTTTCAGTGTTCCTTTTGGGGCTGGGTCCAAGTTGGTCAGGACATTCCTTGCGCTTTCTTGTCTCTGCCCTGGAGGGGTCAGAGGTATTTTCTCCCATCCCACTCATCTTGAACACATATCAGCAA

CircID chr8:70213903|70216764
ORF Type ORF4
Protein Length 86
Nucleotide Length 258
Protein Sequence MSGMGENTSDPSRAETRKRKECPDQLGPSPKRNTEKRNREQENKYIEELAELIFANFNDIDNFNFKPDKCAILKETVKQIRQIKEQ
Nucleotide Sequence ATGAGTGGGATGGGAGAAAATACCTCTGACCCCTCCAGGGCAGAGACAAGAAAGCGCAAGGAATGTCCTGACCAACTTGGACCCAGCCCCAAAAGGAACACTGAAAAACGTAATCGTGAACAGGAAAATAAATATATAGAAGAACTTGCAGAGTTGATTTTTGCAAATTTTAATGATATAGACAACTTTAACTTCAAACCTGACAAATGTGCAATCTTAAAAGAAACTGTGAAGCAAATTCGTCAGATCAAAGAACAA

CircID chr8:70213903|70216764
ORF Type ORF5
Protein Length 37
Nucleotide Length 114
Protein Sequence MTPPGQRQESARNVLTNLDPAPKGTLKNVIVNRKINI
Nucleotide Sequence CTGACCCCTCCAGGGCAGAGACAAGAAAGCGCAAGGAATGTCCTGACCAACTTGGACCCAGCCCCAAAAGGAACACTGAAAAACGTAATCGTGAACAGGAAAATAAATATATAG

CircID chr8:70213903|70216764
ORF Type ORF1
Protein Length 35
Nucleotide Length 105
Protein Sequence MGPSWSGHSLRFLVSALEGSEVFSPIPLILNTYQQ
Nucleotide Sequence CTGGGTCCAAGTTGGTCAGGACATTCCTTGCGCTTTCTTGTCTCTGCCCTGGAGGGGTCAGAGGTATTTTCTCCCATCCCACTCATCTTGAACACATATCAGCAA

CircID chr8:70213903|70216764
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence LFWVQVGQDIPCAFLSLPWRGQRYFLPSHSS
Nucleotide Sequence TTGTTCTGGGTCCAAGTTGGTCAGGACATTCCTTGCGCTTTCTTGTCTCTGCCCTGGAGGGGTCAGAGGTATTTTCTCCCATCCCACTCATCTTGA

CircID chr8:70213903|70216764
ORF Type ORF3
Protein Length 31
Nucleotide Length 93
Protein Sequence MVRTFLALSCLCPGGVRGIFSHPTHLEHISA
Nucleotide Sequence TTGGTCAGGACATTCCTTGCGCTTTCTTGTCTCTGCCCTGGAGGGGTCAGAGGTATTTTCTCCCATCCCACTCATCTTGAACACATATCAGCA

CircID chr8:70213903|70216764
ORF Type ORF4
Protein Length 30
Nucleotide Length 90
Protein Sequence MSGMGENTSDPSRAETRKRKECPDQLGPRT
Nucleotide Sequence ATGAGTGGGATGGGAGAAAATACCTCTGACCCCTCCAGGGCAGAGACAAGAAAGCGCAAGGAATGTCCTGACCAACTTGGACCCAGAACA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr8:70213903|70216764 U2AF2 2 4 1
chr8:70213903|70216764 MOV10 0 0 1
chr8:70213903|70216764 ELAVL1 2 3 0
chr8:70213903|70216764 UPF1 0 2 0
chr8:70213903|70216764 TAF15 0 1 0
chr8:70213903|70216764 FMR1 0 1 2
chr8:70213903|70216764 FUS 0 1 0
chr8:70213903|70216764 DGCR8 1 0 0
chr8:70213903|70216764 SRSF1 0 0 1
chr8:70213903|70216764 NOP58 0 3 2
chr8:70213903|70216764 NOP56 0 0 1
chr8:70213903|70216764 DDX54 0 0 8
chr8:70213903|70216764 RBM10 0 1 0
chr8:70213903|70216764 HNRNPC 0 3 0
chr8:70213903|70216764 TRA2A 0 0 1
chr8:70213903|70216764 DDX3X 0 0 1
chr8:70213903|70216764 FXR1 0 0 1
chr8:70213903|70216764 IGF2BP2 0 0 6
chr8:70213903|70216764 TARDBP 1 0 0
chr8:70213903|70216764 RBFOX2 0 1 0
chr8:70213903|70216764 CSTF2T 0 1 1
chr8:70213903|70216764 FBL 0 1 2
chr8:70213903|70216764 EWSR1 0 0 1
chr8:70213903|70216764 EIF4A3 1 4 7
chr8:70213903|70216764 AGO2 0 1 6