CircRNA Information

General Information
circRNA Basic Information
CircID chr8:73362392|73362692
Strand -
CircType exon
Host Gene ENSG00000253339.1;
Algorism CIRI2;
Sequence CTCCCTTTGTGAAGAGCCCAGAGCCTTTGTCCAAAGCTGCATCACTTCCCACCCAGCCCTTCCTGAGCCAACTCCCCGATGTCTCCAGAAGAACACAGTCGGCATCATCGTGATAACATCAGGGAAACTCCTATTTCCAGCAGTTTCTCCTTCAGCTGCAAAAATGTGCAGCAGTAGACAGGGCGTGGGTTTTTGAAGTCTCTGCAGGAAGTAGAGTTATTTTCTCAGCACCACATCTGAGCGCATCTTCTAAGGGTGGCCGACTGTGTGGGAGCTGCAGGAGCTCAGCCGGGATGCAGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:73362392|73362692 hsa-miR-326 1 1 1
chr8:73362392|73362692 hsa-miR-412-5p 0 0 1
chr8:73362392|73362692 hsa-miR-412-3p 0 0 1
chr8:73362392|73362692 hsa-miR-507 0 0 1
chr8:73362392|73362692 hsa-miR-539-5p 0 0 1
chr8:73362392|73362692 hsa-miR-539-3p 0 0 1
chr8:73362392|73362692 hsa-miR-557 0 0 1
chr8:73362392|73362692 hsa-miR-571 0 0 1
chr8:73362392|73362692 hsa-miR-612 0 0 1
chr8:73362392|73362692 hsa-miR-618 0 1 1
chr8:73362392|73362692 hsa-miR-1301-5p 0 0 1
chr8:73362392|73362692 hsa-miR-1301-3p 0 0 1
chr8:73362392|73362692 hsa-miR-892a 0 1 1
chr8:73362392|73362692 hsa-miR-873-5p 0 0 1
chr8:73362392|73362692 hsa-miR-873-3p 0 0 1
chr8:73362392|73362692 hsa-miR-760 1 1 1
chr8:73362392|73362692 hsa-miR-934 0 1 1
chr8:73362392|73362692 hsa-miR-1287-5p 0 0 1
chr8:73362392|73362692 hsa-miR-1287-3p 0 0 1
chr8:73362392|73362692 hsa-miR-1293 0 0 1
chr8:73362392|73362692 hsa-miR-1299 0 0 1
chr8:73362392|73362692 hsa-miR-1252-5p 0 0 1
chr8:73362392|73362692 hsa-miR-1252-3p 0 0 1
chr8:73362392|73362692 hsa-miR-513b-5p 0 0 1
chr8:73362392|73362692 hsa-miR-513b-3p 0 0 1
chr8:73362392|73362692 hsa-miR-1322 0 1 1
chr8:73362392|73362692 hsa-miR-129-5p 0 0 1
chr8:73362392|73362692 hsa-miR-532-3p 0 1 1
chr8:73362392|73362692 hsa-miR-542-5p 0 0 1
chr8:73362392|73362692 hsa-miR-324-5p 0 0 1
chr8:73362392|73362692 hsa-miR-146b-3p 0 0 1
chr8:73362392|73362692 hsa-miR-339-5p 0 1 1
chr8:73362392|73362692 hsa-miR-1184 0 0 1
chr8:73362392|73362692 hsa-miR-188-3p 0 0 1
chr8:73362392|73362692 hsa-miR-576-3p 0 0 1
chr8:73362392|73362692 hsa-miR-875-3p 0 0 1
chr8:73362392|73362692 hsa-miR-125a-5p 0 0 1
chr8:73362392|73362692 hsa-miR-330-5p 1 0 1
chr8:73362392|73362692 hsa-miR-450b-5p 0 0 1
chr8:73362392|73362692 hsa-miR-548d-3p 0 1 1
chr8:73362392|73362692 hsa-miR-1274a 0 0 1
chr8:73362392|73362692 hsa-miR-125b 0 0 1
chr8:73362392|73362692 hsa-miR-1285 0 0 1
chr8:73362392|73362692 hsa-miR-516b 0 0 1
chr8:73362392|73362692 hsa-miR-24 0 0 1
chr8:73362392|73362692 hsa-miR-107 1 0 0
chr8:73362392|73362692 hsa-miR-663a 1 0 0
chr8:73362392|73362692 hsa-miR-762 1 0 0
chr8:73362392|73362692 hsa-miR-1261 1 1 0
chr8:73362392|73362692 hsa-miR-1270 0 1 0
chr8:73362392|73362692 hsa-miR-3141 1 0 0
chr8:73362392|73362692 hsa-miR-3175 1 0 0
chr8:73362392|73362692 hsa-miR-4322 1 0 0
chr8:73362392|73362692 hsa-miR-4259 1 0 0
chr8:73362392|73362692 hsa-miR-4270 1 0 0
chr8:73362392|73362692 hsa-miR-3615 1 0 0
chr8:73362392|73362692 hsa-miR-3936 1 0 0
chr8:73362392|73362692 hsa-miR-4430 1 0 0
chr8:73362392|73362692 hsa-miR-4437 1 0 0
chr8:73362392|73362692 hsa-miR-4450 1 0 0
chr8:73362392|73362692 hsa-miR-4487 1 0 0
chr8:73362392|73362692 hsa-miR-4489 1 0 0
chr8:73362392|73362692 hsa-miR-4498 1 1 0
chr8:73362392|73362692 hsa-miR-4505 1 1 0
chr8:73362392|73362692 hsa-miR-2392 1 0 0
chr8:73362392|73362692 hsa-miR-4507 1 0 0
chr8:73362392|73362692 hsa-miR-4508 1 0 0
chr8:73362392|73362692 hsa-miR-1587 1 0 0
chr8:73362392|73362692 hsa-miR-4651 1 0 0
chr8:73362392|73362692 hsa-miR-4654 1 0 0
chr8:73362392|73362692 hsa-miR-4656 1 0 0
chr8:73362392|73362692 hsa-miR-4663 0 1 0
chr8:73362392|73362692 hsa-miR-4682 0 1 0
chr8:73362392|73362692 hsa-miR-4688 1 0 0
chr8:73362392|73362692 hsa-miR-4706 1 0 0
chr8:73362392|73362692 hsa-miR-4721 1 0 0
chr8:73362392|73362692 hsa-miR-4739 1 0 0
chr8:73362392|73362692 hsa-miR-4741 1 0 0
chr8:73362392|73362692 hsa-miR-5047 0 1 0
chr8:73362392|73362692 hsa-miR-5698 1 0 0
chr8:73362392|73362692 hsa-miR-5787 1 0 0
chr8:73362392|73362692 hsa-miR-6085 1 0 0
chr8:73362392|73362692 hsa-miR-6132 1 0 0
chr8:73362392|73362692 hsa-miR-6133 1 0 0
chr8:73362392|73362692 hsa-miR-6745 1 0 0
chr8:73362392|73362692 hsa-miR-8077 1 0 0
chr8:73362392|73362692 hsa-miR-8089 1 1 0
chr8:73362392|73362692 hsa-miR-150-3p 1 0 0
chr8:73362392|73362692 hsa-miR-4433b-3p 1 0 0
chr8:73362392|73362692 hsa-miR-214-5p 1 0 0
chr8:73362392|73362692 hsa-miR-4433a-3p 1 0 0
chr8:73362392|73362692 hsa-miR-6861-5p 1 0 0
chr8:73362392|73362692 hsa-miR-6825-5p 1 0 0
chr8:73362392|73362692 hsa-miR-6799-5p 1 0 0
chr8:73362392|73362692 hsa-miR-3692-5p 0 1 0
chr8:73362392|73362692 hsa-miR-139-3p 1 0 0
chr8:73362392|73362692 hsa-miR-3192-5p 1 0 0
chr8:73362392|73362692 hsa-miR-6757-5p 1 0 0
chr8:73362392|73362692 hsa-miR-4695-5p 1 0 0
chr8:73362392|73362692 hsa-miR-4653-3p 1 0 0
chr8:73362392|73362692 hsa-miR-6727-5p 1 0 0
chr8:73362392|73362692 hsa-miR-4655-5p 1 0 0
chr8:73362392|73362692 hsa-miR-5589-5p 1 0 0
chr8:73362392|73362692 hsa-miR-6726-3p 0 1 0
chr8:73362392|73362692 hsa-miR-6742-5p 1 0 0
chr8:73362392|73362692 hsa-miR-659-3p 1 1 0
chr8:73362392|73362692 hsa-miR-6748-5p 1 0 0
chr8:73362392|73362692 hsa-miR-6793-5p 1 0 0
chr8:73362392|73362692 hsa-miR-185-3p 1 0 0
chr8:73362392|73362692 hsa-miR-6829-5p 1 0 0
chr8:73362392|73362692 hsa-miR-2467-5p 1 0 0
chr8:73362392|73362692 hsa-miR-6782-5p 1 0 0
chr8:73362392|73362692 hsa-miR-3934-3p 1 0 0
chr8:73362392|73362692 hsa-miR-5088-5p 1 0 0
chr8:73362392|73362692 hsa-miR-3944-3p 1 0 0
chr8:73362392|73362692 hsa-miR-1229-5p 1 0 0
chr8:73362392|73362692 hsa-miR-1228-5p 1 0 0
chr8:73362392|73362692 hsa-miR-296-3p 1 1 0
chr8:73362392|73362692 hsa-miR-6823-5p 1 0 0
chr8:73362392|73362692 hsa-miR-92b-5p 1 0 0
chr8:73362392|73362692 hsa-miR-103a-3p 1 0 0
chr8:73362392|73362692 hsa-miR-4446-3p 1 1 0
chr8:73362392|73362692 hsa-miR-149-3p 1 0 0
chr8:73362392|73362692 hsa-miR-6824-5p 1 0 0
chr8:73362392|73362692 hsa-miR-3162-5p 1 0 0
chr8:73362392|73362692 hsa-miR-3158-5p 0 1 0
chr8:73362392|73362692 hsa-miR-4715-5p 1 1 0
chr8:73362392|73362692 hsa-miR-7850-5p 0 1 0
chr8:73362392|73362692 hsa-miR-3678-3p 0 1 0
chr8:73362392|73362692 hsa-miR-598-5p 0 1 0
chr8:73362392|73362692 hsa-miR-6770-3p 1 0 0
chr8:73362392|73362692 hsa-miR-1306-3p 1 0 0
chr8:73362392|73362692 hsa-miR-1233-5p 1 0 0
chr8:73362392|73362692 hsa-miR-6769b-5p 1 0 0
chr8:73362392|73362692 hsa-miR-6778-5p 1 0 0
chr8:73362392|73362692 hsa-miR-1343-5p 1 0 0
chr8:73362392|73362692 hsa-miR-5001-5p 1 0 0
chr8:73362392|73362692 hsa-miR-6737-5p 1 0 0
chr8:73362392|73362692 hsa-miR-6743-5p 1 0 0
chr8:73362392|73362692 hsa-miR-6754-5p 1 1 0
chr8:73362392|73362692 hsa-miR-6756-5p 1 1 0
chr8:73362392|73362692 hsa-miR-6813-5p 1 0 0
chr8:73362392|73362692 hsa-miR-6819-5p 1 0 0
chr8:73362392|73362692 hsa-miR-6851-5p 1 0 0
chr8:73362392|73362692 hsa-miR-10401-5p 1 0 0
chr8:73362392|73362692 hsa-miR-6763-5p 1 0 0
chr8:73362392|73362692 hsa-miR-6779-5p 1 0 0
chr8:73362392|73362692 hsa-miR-6780a-5p 1 0 0
chr8:73362392|73362692 hsa-miR-6797-5p 1 0 0
chr8:73362392|73362692 hsa-miR-6808-5p 1 0 0
chr8:73362392|73362692 hsa-miR-6879-5p 1 0 0
chr8:73362392|73362692 hsa-miR-3620-5p 1 0 0
chr8:73362392|73362692 hsa-miR-4728-5p 1 0 0
chr8:73362392|73362692 hsa-miR-5196-5p 1 0 0
chr8:73362392|73362692 hsa-miR-6780b-5p 1 0 0
chr8:73362392|73362692 hsa-miR-1909-3p 1 0 0
chr8:73362392|73362692 hsa-miR-4701-3p 1 0 0
chr8:73362392|73362692 hsa-miR-6777-5p 1 1 0
chr8:73362392|73362692 hsa-miR-6848-5p 1 0 0
chr8:73362392|73362692 hsa-miR-6858-5p 1 0 0
chr8:73362392|73362692 hsa-miR-6883-5p 1 0 0
chr8:73362392|73362692 hsa-miR-6889-5p 1 1 0
chr8:73362392|73362692 hsa-miR-4436b-3p 1 0 0
chr8:73362392|73362692 hsa-miR-939-5p 1 0 0
chr8:73362392|73362692 hsa-miR-4758-5p 1 0 0
chr8:73362392|73362692 hsa-miR-3940-5p 1 0 0
chr8:73362392|73362692 hsa-miR-6736-5p 1 0 0
chr8:73362392|73362692 hsa-miR-7151-3p 1 0 0
chr8:73362392|73362692 hsa-miR-4646-5p 1 0 0
chr8:73362392|73362692 hsa-miR-4747-5p 1 0 0
chr8:73362392|73362692 hsa-miR-6766-5p 1 1 0
chr8:73362392|73362692 hsa-miR-6785-5p 1 0 0
chr8:73362392|73362692 hsa-miR-363-5p 1 0 0
chr8:73362392|73362692 hsa-miR-6807-3p 0 1 0
chr8:73362392|73362692 hsa-miR-4659b-3p 0 1 0
chr8:73362392|73362692 hsa-miR-548as-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr8:73362392|73362692
ORF Type ORF1
Protein Length 32
Nucleotide Length 99
Protein Sequence MSPEEHSRHHRDNIRETPISSSFSFSCKNVQQ
Nucleotide Sequence ATGTCTCCAGAAGAACACAGTCGGCATCATCGTGATAACATCAGGGAAACTCCTATTTCCAGCAGTTTCTCCTTCAGCTGCAAAAATGTGCAGCAGTAG
CircID chr8:73362392|73362692
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence MSKAASLPTQPFLSQLPDVSRRTQSASS
Nucleotide Sequence TTGTCCAAAGCTGCATCACTTCCCACCCAGCCCTTCCTGAGCCAACTCCCCGATGTCTCCAGAAGAACACAGTCGGCATCATCGTGA
CircID chr8:73362392|73362692
ORF Type ORF3
Protein Length 48
Nucleotide Length 144
Protein Sequence MQKCAAVDRAWVFEVSAGSRVIFSAPHLSASSKGGRLCGSCRSSAGMQ
Nucleotide Sequence CTGCAAAAATGTGCAGCAGTAGACAGGGCGTGGGTTTTTGAAGTCTCTGCAGGAAGTAGAGTTATTTTCTCAGCACCACATCTGAGCGCATCTTCTAAGGGTGGCCGACTGTGTGGGAGCTGCAGGAGCTCAGCCGGGATGCAG
CircID chr8:73362392|73362692
ORF Type ORF4
Protein Length 42
Nucleotide Length 129
Protein Sequence MQLPHSRPPLEDALRCGAEKITLLPAETSKTHALSTAAHFCS
Nucleotide Sequence CTGCAGCTCCCACACAGTCGGCCACCCTTAGAAGATGCGCTCAGATGTGGTGCTGAGAAAATAACTCTACTTCCTGCAGAGACTTCAAAAACCCACGCCCTGTCTACTGCTGCACATTTTTGCAGCTGA
CircID chr8:73362392|73362692
ORF Type ORF5
Protein Length 29
Nucleotide Length 87
Protein Sequence METSGSWLRKGWVGSDAALDKGSGLFTKG
Nucleotide Sequence CTGGAGACATCGGGGAGTTGGCTCAGGAAGGGCTGGGTGGGAAGTGATGCAGCTTTGGACAAAGGCTCTGGGCTCTTCACAAAGGGA
CircID chr8:73362392|73362692
ORF Type ORF6
Protein Length 69
Nucleotide Length 207
Protein Sequence MQRLQKPTPCLLLHIFAAEGETAGNRSFPDVITMMPTVFFWRHRGVGSGRAGWEVMQLWTKALGSSQRE
Nucleotide Sequence CTGCAGAGACTTCAAAAACCCACGCCCTGTCTACTGCTGCACATTTTTGCAGCTGAAGGAGAAACTGCTGGAAATAGGAGTTTCCCTGATGTTATCACGATGATGCCGACTGTGTTCTTCTGGAGACATCGGGGAGTTGGCTCAGGAAGGGCTGGGTGGGAAGTGATGCAGCTTTGGACAAAGGCTCTGGGCTCTTCACAAAGGGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab