CircNet

General Information

circRNA Basic Information

CircID	chr8:94530963\|94535007
Strand	-
CircType	exon
Host Gene	ENSG00000164944.11;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTGAATACTGATGGTCTGGTGCTAAGAGGCTGGTATAACTGTCTGACACTGGCAATATATGGATCAGTGGATAGAGTGATAAGTCATGACAGAGACTCTCCACCACCACCACCTCCACCGCCACCACCTCCCCAGCCACAACCAAGTTTGAAAAGGAATCCAAAACATGGATCTGAGGGAATTTTTTCCCATTTAAAATATCTTAATGATAATGCAATCTAGTGACTATTCATGGTTTACTATTAAAATTATTTGTAAATGAATTGAAAAATAGGCAGGGAGTTTGTTACATATTCCCGGAATACTTATATAAATGACATTTTTTTTTCAAGAGTGCATTTAAAATTTATTAGGTATCTACATCTTAACTAATGTAGATTTCTTCCACTTTTGAGAACCTTTTGCTCATTAACTGGAAACAAGAAAAATAAGAACTTCAGTGGCTTTCTTTCAGAAGATAGGCAGCTGGACTCATGTTTCTCAGAATCTCTTCTCCTCACTCCAGTGTTAATCACTGTAAGAAGTTGACCACAAGGCTGAGAGCAGTGGCTCATGGCTGTAATCCTAGCACTTTGGGAGGCCGAAGTGGGAGGATTGCTTGGGGTCAGGAATTCAAGACCAGCCTGGGCAACATAGGGAGAACCTGCCCCTCCCAAAAAACTGATGGGGAGAAAGAAGATCAGTTTAATGGAAGCCCTCCAAGACCACAGCCAAGGGGACCAAGAACTCCTCCAGGACCCCCTCCACCTGATGATGATGAAGATGATCCTGTGCCTCTGCCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr8:94530963\|94535007	hsa-miR-196a-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr8:94530963\|94535007
ORF Type	ORF1
Protein Length	103
Nucleotide Length	309
Protein Sequence	MFLRISSPHSSVNHCKKLTTRLRAVAHGCNPSTLGGRSGRIAWGQEFKTSLGNIGRTCPSQKTDGEKEDQFNGSPPRPQPRGPRTPPGPPPPDDDEDDPVPLP
Nucleotide Sequence	ATGTTTCTCAGAATCTCTTCTCCTCACTCCAGTGTTAATCACTGTAAGAAGTTGACCACAAGGCTGAGAGCAGTGGCTCATGGCTGTAATCCTAGCACTTTGGGAGGCCGAAGTGGGAGGATTGCTTGGGGTCAGGAATTCAAGACCAGCCTGGGCAACATAGGGAGAACCTGCCCCTCCCAAAAAACTGATGGGGAGAAAGAAGATCAGTTTAATGGAAGCCCTCCAAGACCACAGCCAAGGGGACCAAGAACTCCTCCAGGACCCCCTCCACCTGATGATGATGAAGATGATCCTGTGCCTCTGCCA

CircID	chr8:94530963\|94535007
ORF Type	ORF2
Protein Length	62
Nucleotide Length	186
Protein Sequence	MSHCSQPCGQLLTVINTGVRRRDSEKHESSCLSSERKPLKFLFFLFPVNEQKVLKSGRNLH*
Nucleotide Sequence	ATGAGCCACTGCTCTCAGCCTTGTGGTCAACTTCTTACAGTGATTAACACTGGAGTGAGGAGAAGAGATTCTGAGAAACATGAGTCCAGCTGCCTATCTTCTGAAAGAAAGCCACTGAAGTTCTTATTTTTCTTGTTTCCAGTTAATGAGCAAAAGGTTCTCAAAAGTGGAAGAAATCTACATTAG

CircID	chr8:94530963\|94535007
ORF Type	ORF3
Protein Length	43
Nucleotide Length	129
Protein Sequence	MGKNSLRSMFWIPFQTWLWLGRWWRWRWWWWRVSVMTYHSIH*
Nucleotide Sequence	ATGGGAAAAAATTCCCTCAGATCCATGTTTTGGATTCCTTTTCAAACTTGGTTGTGGCTGGGGAGGTGGTGGCGGTGGAGGTGGTGGTGGTGGAGAGTCTCTGTCATGACTTATCACTCTATCCACTGA

CircID	chr8:94530963\|94535007
ORF Type	ORF4
Protein Length	40
Nucleotide Length	120
Protein Sequence	MGRKKISLMEALQDHSQGDQELLQDPLHLMMMKMILCLCQ
Nucleotide Sequence	ATGGGGAGAAAGAAGATCAGTTTAATGGAAGCCCTCCAAGACCACAGCCAAGGGGACCAAGAACTCCTCCAGGACCCCCTCCACCTGATGATGATGAAGATGATCCTGTGCCTCTGCCAG

CircID	chr8:94530963\|94535007
ORF Type	ORF5
Protein Length	74
Nucleotide Length	222
Protein Sequence	VNTDGLVLRGWYNCLTLAIYGSVDRVISHDRDSPPPPPPPPPPPQPQPSLKRNPKHGSEGIFSHLKYLNDNAI*
Nucleotide Sequence	GTGAATACTGATGGTCTGGTGCTAAGAGGCTGGTATAACTGTCTGACACTGGCAATATATGGATCAGTGGATAGAGTGATAAGTCATGACAGAGACTCTCCACCACCACCACCTCCACCGCCACCACCTCCCCAGCCACAACCAAGTTTGAAAAGGAATCCAAAACATGGATCTGAGGGAATTTTTTCCCATTTAAAATATCTTAATGATAATGCAATCTAG

CircID	chr8:94530963\|94535007
ORF Type	ORF6
Protein Length	54
Nucleotide Length	162
Protein Sequence	LDSFSNLVVAGEVVAVEVVVVESLCHDLSLYPLIHILPVSDSYTSLLAPDHQYS
Nucleotide Sequence	TTGGATTCCTTTTCAAACTTGGTTGTGGCTGGGGAGGTGGTGGCGGTGGAGGTGGTGGTGGTGGAGAGTCTCTGTCATGACTTATCACTCTATCCACTGATCCATATATTGCCAGTGTCAGACAGTTATACCAGCCTCTTAGCACCAGACCATCAGTATTCA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr8:94530963\|94535007	GTF2F1	0	1	0
chr8:94530963\|94535007	ELAVL1	4	0	2
chr8:94530963\|94535007	ZNF184	1	2	3
chr8:94530963\|94535007	FAM120A	1	0	0
chr8:94530963\|94535007	PRPF8	1	3	1
chr8:94530963\|94535007	YTHDF1	0	0	1
chr8:94530963\|94535007	TAF15	0	1	0
chr8:94530963\|94535007	FMR1	0	3	5
chr8:94530963\|94535007	CPSF6	2	0	3
chr8:94530963\|94535007	DGCR8	1	0	0
chr8:94530963\|94535007	SRSF7	0	0	1
chr8:94530963\|94535007	SRSF1	0	3	7
chr8:94530963\|94535007	NOP58	0	0	3
chr8:94530963\|94535007	U2AF1	1	0	3
chr8:94530963\|94535007	U2AF2	3	1	4
chr8:94530963\|94535007	SRSF9	0	1	1
chr8:94530963\|94535007	DDX54	0	4	9
chr8:94530963\|94535007	HNRNPL	0	1	0
chr8:94530963\|94535007	HNRNPA2B1	0	1	2
chr8:94530963\|94535007	PTBP1	0	1	1
chr8:94530963\|94535007	HNRNPC	4	0	5
chr8:94530963\|94535007	TRA2A	1	3	6
chr8:94530963\|94535007	DHX9	0	0	3
chr8:94530963\|94535007	SMNDC1	0	2	1
chr8:94530963\|94535007	MSI2	0	0	1
chr8:94530963\|94535007	LIN28B	0	2	3
chr8:94530963\|94535007	LIN28A	0	0	1
chr8:94530963\|94535007	RANGAP1	0	0	1
chr8:94530963\|94535007	FXR1	0	1	1
chr8:94530963\|94535007	FXR2	0	1	3
chr8:94530963\|94535007	NUMA1	0	1	0
chr8:94530963\|94535007	SND1	0	0	1
chr8:94530963\|94535007	IGF2BP1	0	0	2
chr8:94530963\|94535007	DICER1	1	0	0
chr8:94530963\|94535007	IGF2BP3	0	1	1
chr8:94530963\|94535007	IGF2BP2	1	0	10
chr8:94530963\|94535007	ELAVL3	1	0	0
chr8:94530963\|94535007	HNRNPUL1	0	1	0
chr8:94530963\|94535007	TARDBP	0	1	3
chr8:94530963\|94535007	YTHDC1	0	0	1
chr8:94530963\|94535007	BUD13	2	2	4
chr8:94530963\|94535007	RBFOX2	1	0	3
chr8:94530963\|94535007	EIF4G2	0	1	5
chr8:94530963\|94535007	DDX42	1	0	0
chr8:94530963\|94535007	CSTF2T	0	1	2
chr8:94530963\|94535007	BCCIP	0	0	2
chr8:94530963\|94535007	YWHAG	0	0	1
chr8:94530963\|94535007	TARBP2	0	0	4
chr8:94530963\|94535007	XRN2	0	0	1
chr8:94530963\|94535007	FBL	0	1	3
chr8:94530963\|94535007	AGO1	0	0	1
chr8:94530963\|94535007	EIF4A3	4	2	5
chr8:94530963\|94535007	AGO2	0	0	1

CircRNA Information