CircNet

General Information

circRNA Basic Information

CircID	chr9:100104498\|100293043
Strand	+
CircType	exon
Host Gene	ENSG00000119509.12;
Algorism	find_circ;CIRI2;CIRC
Sequence	GTTGCTCCGGTTGCTAAGAAGACTATGAACAAGTCAGAGAACCTGCTGTTTGCTGGTTCATCATTAGCATCACAAGTCCATGCTGCTGCCGTTAATGGAGATAAGGGTGCTCTACAGAGGCTCATCGTAGGAAACTCTGCTCTTAAAGACAAAGAAGATCAGTTTGGGAGAACACCACTTATGTATTGCGTGTTGGCTGACAGATTGGATTGTGCAGATGCTCTTCTGAAGGCAGGAGCAGATGTGAATAAAACTGACCATAGCCAGAGAACAGCCCTCCATCTTGCAGCCCAGAAGAGCTCCGACTGCAGATAATTCAGAGAGAACGAAGGAGGAAGGAGCTGTTTCGCAAAAAGAACAAGGCAGCAGCAGTCATCCAGCGCGCCTGGCGAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr9:100104498\|100293043
ORF Type	ORF1
Protein Length	97
Nucleotide Length	291
Protein Sequence	MNKSENLLFAGSSLASQVHAAAVNGDKGALQRLIVGNSALKDKEDQFGRTPLMYCVLADRLDCADALLKAGADVNKTDHSQRTALHLAAQKSSDCR*
Nucleotide Sequence	ATGAACAAGTCAGAGAACCTGCTGTTTGCTGGTTCATCATTAGCATCACAAGTCCATGCTGCTGCCGTTAATGGAGATAAGGGTGCTCTACAGAGGCTCATCGTAGGAAACTCTGCTCTTAAAGACAAAGAAGATCAGTTTGGGAGAACACCACTTATGTATTGCGTGTTGGCTGACAGATTGGATTGTGCAGATGCTCTTCTGAAGGCAGGAGCAGATGTGAATAAAACTGACCATAGCCAGAGAACAGCCCTCCATCTTGCAGCCCAGAAGAGCTCCGACTGCAGATAA

CircID	chr9:100104498\|100293043
ORF Type	ORF2
Protein Length	57
Nucleotide Length	171
Protein Sequence	MEGCSLAMVSFIHICSCLQKSICTIQSVSQHAIHKWCSPKLIFFVFKSRVSYDEPL*
Nucleotide Sequence	ATGGAGGGCTGTTCTCTGGCTATGGTCAGTTTTATTCACATCTGCTCCTGCCTTCAGAAGAGCATCTGCACAATCCAATCTGTCAGCCAACACGCAATACATAAGTGGTGTTCTCCCAAACTGATCTTCTTTGTCTTTAAGAGCAGAGTTTCCTACGATGAGCCTCTGTAG

CircID	chr9:100104498\|100293043
ORF Type	ORF3
Protein Length	41
Nucleotide Length	123
Protein Sequence	MSLCRAPLSPLTAAAWTCDANDEPANSRFSDLFIVFLATGA
Nucleotide Sequence	ATGAGCCTCTGTAGAGCACCCTTATCTCCATTAACGGCAGCAGCATGGACTTGTGATGCTAATGATGAACCAGCAAACAGCAGGTTCTCTGACTTGTTCATAGTCTTCTTAGCAACCGGAGCA

CircID	chr9:100104498\|100293043
ORF Type	ORF4
Protein Length	78
Nucleotide Length	234
Protein Sequence	SPGALDDCCCLVLFAKQLLPPSFSLNYLQSELFWAARWRAVLWLWSVLFTSAPAFRRASAQSNLSANTQYISGVLPN*
Nucleotide Sequence	TCGCCAGGCGCGCTGGATGACTGCTGCTGCCTTGTTCTTTTTGCGAAACAGCTCCTTCCTCCTTCGTTCTCTCTGAATTATCTGCAGTCGGAGCTCTTCTGGGCTGCAAGATGGAGGGCTGTTCTCTGGCTATGGTCAGTTTTATTCACATCTGCTCCTGCCTTCAGAAGAGCATCTGCACAATCCAATCTGTCAGCCAACACGCAATACATAAGTGGTGTTCTCCCAAACTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr9:100104498\|100293043	U2AF2	9	3	0
chr9:100104498\|100293043	ELAVL1	1	0	0
chr9:100104498\|100293043	SF3B4	1	0	0
chr9:100104498\|100293043	FAM120A	1	0	0
chr9:100104498\|100293043	CELF2	0	1	0
chr9:100104498\|100293043	PRPF8	2	2	0
chr9:100104498\|100293043	FUS	0	2	0
chr9:100104498\|100293043	SRSF1	0	1	2
chr9:100104498\|100293043	NOP58	0	1	2
chr9:100104498\|100293043	NOP56	0	1	2
chr9:100104498\|100293043	SRSF9	1	0	0
chr9:100104498\|100293043	DDX54	0	1	3
chr9:100104498\|100293043	SF3A3	2	0	0
chr9:100104498\|100293043	HNRNPC	1	0	0
chr9:100104498\|100293043	BCCIP	1	0	0
chr9:100104498\|100293043	IGF2BP3	1	0	0
chr9:100104498\|100293043	IGF2BP2	1	2	8
chr9:100104498\|100293043	TARDBP	1	0	0
chr9:100104498\|100293043	BUD13	0	0	1
chr9:100104498\|100293043	XRN2	1	0	0
chr9:100104498\|100293043	AGO2	0	0	1
chr9:100104498\|100293043	EIF4A3	1	4	6
chr9:100104498\|100293043	FBL	0	0	1

CircRNA Information