CircRNA Information

General Information
circRNA Basic Information
CircID chr9:110169594|110169765
Strand +
CircType exon
Host Gene ENSG00000157654.16;
Algorism CIRI2;
Sequence ACACACACACACATCCACACACACCCCATCTTTAGGATTTGTAGCTGATTCCAAGCCTGCACTTATTTCTATTCTATATTTTTCTTTGTATCATCCTGAAACACACTGGTTGCTCAGCAAAAATAGTATCTCTTACCTCCTTATTTTATTCCCATTCTTTCTCCTTCCCTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:110169594|110169765 hsa-miR-186-5p 0 0 1
chr9:110169594|110169765 hsa-miR-186-3p 0 0 1
chr9:110169594|110169765 hsa-miR-302a-5p 0 0 1
chr9:110169594|110169765 hsa-miR-302a-3p 0 0 1
chr9:110169594|110169765 hsa-miR-302b-5p 0 0 1
chr9:110169594|110169765 hsa-miR-302b-3p 0 0 1
chr9:110169594|110169765 hsa-miR-302c-5p 0 0 1
chr9:110169594|110169765 hsa-miR-302c-3p 0 0 1
chr9:110169594|110169765 hsa-miR-302d-5p 0 0 1
chr9:110169594|110169765 hsa-miR-302d-3p 0 0 1
chr9:110169594|110169765 hsa-miR-372-5p 0 0 1
chr9:110169594|110169765 hsa-miR-372-3p 0 0 1
chr9:110169594|110169765 hsa-miR-373-5p 0 0 1
chr9:110169594|110169765 hsa-miR-373-3p 0 0 1
chr9:110169594|110169765 hsa-miR-520e-5p 0 0 1
chr9:110169594|110169765 hsa-miR-520e-3p 0 0 1
chr9:110169594|110169765 hsa-miR-520b-5p 0 0 1
chr9:110169594|110169765 hsa-miR-520b-3p 0 0 1
chr9:110169594|110169765 hsa-miR-608 1 0 1
chr9:110169594|110169765 hsa-miR-302e 0 0 1
chr9:110169594|110169765 hsa-miR-129-5p 0 0 1
chr9:110169594|110169765 hsa-miR-1283 0 0 1
chr9:110169594|110169765 hsa-miR-199a-5p 0 0 1
chr9:110169594|110169765 hsa-miR-628-5p 0 0 1
chr9:110169594|110169765 hsa-miR-524-5p 0 0 1
chr9:110169594|110169765 hsa-miR-199b-5p 0 0 1
chr9:110169594|110169765 hsa-miR-342-5p 1 0 1
chr9:110169594|110169765 hsa-miR-520d-3p 0 0 1
chr9:110169594|110169765 hsa-miR-519b-3p 0 0 1
chr9:110169594|110169765 hsa-miR-519c-3p 0 0 1
chr9:110169594|110169765 hsa-miR-520a-3p 0 0 1
chr9:110169594|110169765 hsa-miR-520c-3p 0 0 1
chr9:110169594|110169765 hsa-miR-520d-5p 0 0 1
chr9:110169594|110169765 hsa-miR-644 0 0 1
chr9:110169594|110169765 hsa-miR-147 0 0 1
chr9:110169594|110169765 hsa-miR-519a 0 0 1
chr9:110169594|110169765 hsa-miR-147a 0 1 0
chr9:110169594|110169765 hsa-miR-184 1 0 0
chr9:110169594|110169765 hsa-miR-765 1 1 0
chr9:110169594|110169765 hsa-miR-1255a 1 0 0
chr9:110169594|110169765 hsa-miR-3141 1 0 0
chr9:110169594|110169765 hsa-miR-3154 1 0 0
chr9:110169594|110169765 hsa-miR-3163 0 1 0
chr9:110169594|110169765 hsa-miR-4302 0 1 0
chr9:110169594|110169765 hsa-miR-4271 1 0 0
chr9:110169594|110169765 hsa-miR-3936 1 0 0
chr9:110169594|110169765 hsa-miR-4428 1 1 0
chr9:110169594|110169765 hsa-miR-4455 1 1 0
chr9:110169594|110169765 hsa-miR-4464 0 1 0
chr9:110169594|110169765 hsa-miR-4476 1 0 0
chr9:110169594|110169765 hsa-miR-3689c 1 0 0
chr9:110169594|110169765 hsa-miR-2392 1 1 0
chr9:110169594|110169765 hsa-miR-4510 1 0 0
chr9:110169594|110169765 hsa-miR-4516 1 0 0
chr9:110169594|110169765 hsa-miR-4533 1 0 0
chr9:110169594|110169765 hsa-miR-4644 1 0 0
chr9:110169594|110169765 hsa-miR-4647 1 1 0
chr9:110169594|110169765 hsa-miR-4651 1 0 0
chr9:110169594|110169765 hsa-miR-4689 1 0 0
chr9:110169594|110169765 hsa-miR-4706 1 0 0
chr9:110169594|110169765 hsa-miR-4739 1 1 0
chr9:110169594|110169765 hsa-miR-4784 1 0 0
chr9:110169594|110169765 hsa-miR-5572 1 0 0
chr9:110169594|110169765 hsa-miR-548ax 0 1 0
chr9:110169594|110169765 hsa-miR-5690 0 1 0
chr9:110169594|110169765 hsa-miR-5702 0 1 0
chr9:110169594|110169765 hsa-miR-5703 1 0 0
chr9:110169594|110169765 hsa-miR-5739 1 1 0
chr9:110169594|110169765 hsa-miR-6090 1 0 0
chr9:110169594|110169765 hsa-miR-6124 1 0 0
chr9:110169594|110169765 hsa-miR-6127 1 0 0
chr9:110169594|110169765 hsa-miR-6129 1 0 0
chr9:110169594|110169765 hsa-miR-6133 1 0 0
chr9:110169594|110169765 hsa-miR-8085 1 0 0
chr9:110169594|110169765 hsa-miR-12114 1 0 0
chr9:110169594|110169765 hsa-miR-12118 1 0 0
chr9:110169594|110169765 hsa-miR-122-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6747-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6809-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6765-5p 1 0 0
chr9:110169594|110169765 hsa-miR-7106-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6825-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6857-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6799-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6757-5p 1 0 0
chr9:110169594|110169765 hsa-miR-7847-3p 1 0 0
chr9:110169594|110169765 hsa-miR-4695-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6746-5p 1 0 0
chr9:110169594|110169765 hsa-miR-7154-3p 1 0 0
chr9:110169594|110169765 hsa-miR-3682-3p 1 1 0
chr9:110169594|110169765 hsa-miR-6742-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6716-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6871-5p 1 0 0
chr9:110169594|110169765 hsa-miR-3180-3p 1 0 0
chr9:110169594|110169765 hsa-miR-6772-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6732-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6798-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6760-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6881-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6782-5p 1 0 0
chr9:110169594|110169765 hsa-miR-1226-5p 1 0 0
chr9:110169594|110169765 hsa-miR-3202 1 0 0
chr9:110169594|110169765 hsa-miR-149-3p 1 0 0
chr9:110169594|110169765 hsa-miR-4668-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6824-5p 1 0 0
chr9:110169594|110169765 hsa-miR-5010-5p 1 0 0
chr9:110169594|110169765 hsa-miR-5584-5p 1 0 0
chr9:110169594|110169765 hsa-miR-574-5p 1 1 0
chr9:110169594|110169765 hsa-let-7e-5p 0 1 0
chr9:110169594|110169765 hsa-miR-4727-3p 1 0 0
chr9:110169594|110169765 hsa-miR-1207-5p 1 0 0
chr9:110169594|110169765 hsa-miR-3689b-3p 1 0 0
chr9:110169594|110169765 hsa-miR-4763-3p 1 0 0
chr9:110169594|110169765 hsa-miR-6778-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6812-5p 1 1 0
chr9:110169594|110169765 hsa-miR-6737-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6752-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6754-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6819-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6851-5p 1 0 0
chr9:110169594|110169765 hsa-miR-7110-5p 1 0 0
chr9:110169594|110169765 hsa-miR-10401-5p 1 0 0
chr9:110169594|110169765 hsa-miR-11181-3p 1 0 0
chr9:110169594|110169765 hsa-miR-1249-5p 1 1 0
chr9:110169594|110169765 hsa-miR-6763-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6779-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6780a-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6788-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6797-5p 1 1 0
chr9:110169594|110169765 hsa-miR-6808-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6875-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6879-5p 1 0 0
chr9:110169594|110169765 hsa-miR-4728-5p 1 0 0
chr9:110169594|110169765 hsa-miR-5196-5p 1 1 0
chr9:110169594|110169765 hsa-miR-6780b-5p 1 0 0
chr9:110169594|110169765 hsa-miR-4725-3p 1 0 0
chr9:110169594|110169765 hsa-miR-4745-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6795-5p 0 1 0
chr9:110169594|110169765 hsa-miR-6858-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6883-5p 1 0 0
chr9:110169594|110169765 hsa-miR-3187-5p 1 0 0
chr9:110169594|110169765 hsa-miR-4436b-3p 1 0 0
chr9:110169594|110169765 hsa-miR-4758-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6739-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6758-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6855-5p 1 0 0
chr9:110169594|110169765 hsa-miR-7151-3p 1 0 0
chr9:110169594|110169765 hsa-miR-4747-5p 1 1 0
chr9:110169594|110169765 hsa-miR-6876-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6891-5p 1 1 0
chr9:110169594|110169765 hsa-miR-4472 1 0 0
chr9:110169594|110169765 hsa-miR-4716-3p 1 0 0
chr9:110169594|110169765 hsa-miR-6785-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6790-5p 1 0 0
chr9:110169594|110169765 hsa-miR-6811-5p 0 1 0
chr9:110169594|110169765 hsa-miR-1255b-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr9:110169594|110169765
ORF Type ORF1
Protein Length 29
Nucleotide Length 87
Protein Sequence MYHPETHWLLSKNSISYLLILFPFFLLPS
Nucleotide Sequence TTGTATCATCCTGAAACACACTGGTTGCTCAGCAAAAATAGTATCTCTTACCTCCTTATTTTATTCCCATTCTTTCTCCTTCCCTCC
CircID chr9:110169594|110169765
ORF Type ORF2
Protein Length 42
Nucleotide Length 126
Protein Sequence MIPSLHLFLFYIFLCIILKHTGCSAKIVSLTSLFYSHSFSFP
Nucleotide Sequence CTGATTCCAAGCCTGCACTTATTTCTATTCTATATTTTTCTTTGTATCATCCTGAAACACACTGGTTGCTCAGCAAAAATAGTATCTCTTACCTCCTTATTTTATTCCCATTCTTTCTCCTTCCCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab