CircNet

General Information

circRNA Basic Information

CircID	chr9:112227411\|112228472
Strand	-
CircType	exon
Host Gene	ENSG00000119314.15;
Algorism	CIRI2;DCC;
Sequence	GAGTCTATGGTGATGTACATCGAGTGAAGATTATGTTTAATAAGAAAGAAAATGCCTTGGTTCAGATGGCGGATGCAAATCAAGCTCAGCTAGCAATGAACCATCTAAGTGGTCAGAGACTTTATGGGAAAGTGCTTCGTGCTACACTGTCCAAACATCAAGCAGTACAGCTTCCTCGAGAGGGACAAGAAGACCAAGGTCTGACTAAGGATTTCAGCAATAGTCCTTTGCATCGCTTTAAAAAGCCGGGCTCTAAAAACTTCCAGAATATCTTTCCACCATCAGCCACTCTGCATCTTTCCAACATTCC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr9:112227411\|112228472
ORF Type	ORF1
Protein Length	92
Nucleotide Length	276
Protein Sequence	MFNKKENALVQMADANQAQLAMNHLSGQRLYGKVLRATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNI
Nucleotide Sequence	ATGTTTAATAAGAAAGAAAATGCCTTGGTTCAGATGGCGGATGCAAATCAAGCTCAGCTAGCAATGAACCATCTAAGTGGTCAGAGACTTTATGGGAAAGTGCTTCGTGCTACACTGTCCAAACATCAAGCAGTACAGCTTCCTCGAGAGGGACAAGAAGACCAAGGTCTGACTAAGGATTTCAGCAATAGTCCTTTGCATCGCTTTAAAAAGCCGGGCTCTAAAAACTTCCAGAATATCTTTCCACCATCAGCCACTCTGCATCTTTCCAACATT

CircID	chr9:112227411\|112228472
ORF Type	ORF2
Protein Length	50
Nucleotide Length	150
Protein Sequence	MLERCRVADGGKIFWKFLEPGFLKRCKGLLLKSLVRPWSSCPSRGSCTA*
Nucleotide Sequence	ATGTTGGAAAGATGCAGAGTGGCTGATGGTGGAAAGATATTCTGGAAGTTTTTAGAGCCCGGCTTTTTAAAGCGATGCAAAGGACTATTGCTGAAATCCTTAGTCAGACCTTGGTCTTCTTGTCCCTCTCGAGGAAGCTGTACTGCTTGA

CircID	chr9:112227411\|112228472
ORF Type	ORF3
Protein Length	43
Nucleotide Length	129
Protein Sequence	MQRTIAEILSQTLVFLSLSRKLYCLMFGQCSTKHFPIKSLTT*
Nucleotide Sequence	ATGCAAAGGACTATTGCTGAAATCCTTAGTCAGACCTTGGTCTTCTTGTCCCTCTCGAGGAAGCTGTACTGCTTGATGTTTGGACAGTGTAGCACGAAGCACTTTCCCATAAAGTCTCTGACCACTTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr9:112227411\|112228472	RBM5	1	0	0
chr9:112227411\|112228472	NOP56	1	0	0
chr9:112227411\|112228472	ELAVL1	1	1	1
chr9:112227411\|112228472	PRPF8	0	1	0
chr9:112227411\|112228472	YTHDF1	0	0	1
chr9:112227411\|112228472	UPF1	1	1	0
chr9:112227411\|112228472	TAF15	1	0	1
chr9:112227411\|112228472	FMR1	0	0	2
chr9:112227411\|112228472	SRSF1	0	0	1
chr9:112227411\|112228472	NOP58	0	1	2
chr9:112227411\|112228472	U2AF2	9	4	3
chr9:112227411\|112228472	DDX54	0	0	9
chr9:112227411\|112228472	SBDS	0	1	0
chr9:112227411\|112228472	HNRNPK	0	1	0
chr9:112227411\|112228472	PCBP2	0	1	0
chr9:112227411\|112228472	HNRNPA2B1	1	0	0
chr9:112227411\|112228472	SF3A3	1	0	0
chr9:112227411\|112228472	PTBP1	0	0	2
chr9:112227411\|112228472	TRA2A	0	1	4
chr9:112227411\|112228472	HNRNPM	0	1	0
chr9:112227411\|112228472	SMNDC1	1	0	0
chr9:112227411\|112228472	ACIN1	0	0	1
chr9:112227411\|112228472	FXR1	0	1	1
chr9:112227411\|112228472	FXR2	0	0	1
chr9:112227411\|112228472	SND1	0	3	2
chr9:112227411\|112228472	IGF2BP1	0	5	10
chr9:112227411\|112228472	IGF2BP3	0	3	4
chr9:112227411\|112228472	IGF2BP2	0	7	7
chr9:112227411\|112228472	TARDBP	0	2	0
chr9:112227411\|112228472	YTHDC1	0	1	1
chr9:112227411\|112228472	BUD13	0	1	1
chr9:112227411\|112228472	RBM47	1	1	2
chr9:112227411\|112228472	EIF4G2	0	1	0
chr9:112227411\|112228472	CSTF2T	0	0	1
chr9:112227411\|112228472	TIAL1	0	1	0
chr9:112227411\|112228472	AGO2	0	0	5
chr9:112227411\|112228472	EIF4A3	0	3	7
chr9:112227411\|112228472	FBL	1	0	2

CircRNA Information