CircRNA Information

General Information
circRNA Basic Information
CircID chr9:113162978|113163150
Strand -
CircType exon
Host Gene ENSG00000136867.9;
Algorism CIRI2;
Sequence TATACTTCCAACTGCCCTTTCTTCTGATGGCTATTCCTCCACCTTATTCCCAGCCCCTGGAAACTTTGAGCTGAAGCCAGCACTTGCTCCCTGGAGTTCGGAAGCCATTGCAGCAACCTTCCTTCTCAGCCAGCCTACGTAGGGCCCAGGCATGGTCTTGTGTCTTAAGACAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:113162978|113163150 hsa-miR-18a-5p 0 0 1
chr9:113162978|113163150 hsa-miR-18a-3p 0 0 1
chr9:113162978|113163150 hsa-miR-208a-5p 0 0 1
chr9:113162978|113163150 hsa-miR-208a-3p 0 0 1
chr9:113162978|113163150 hsa-miR-302a-5p 0 0 1
chr9:113162978|113163150 hsa-miR-302a-3p 0 0 1
chr9:113162978|113163150 hsa-miR-302b-5p 0 0 1
chr9:113162978|113163150 hsa-miR-302b-3p 0 0 1
chr9:113162978|113163150 hsa-miR-302c-5p 0 0 1
chr9:113162978|113163150 hsa-miR-302c-3p 0 0 1
chr9:113162978|113163150 hsa-miR-302d-5p 0 0 1
chr9:113162978|113163150 hsa-miR-302d-3p 0 0 1
chr9:113162978|113163150 hsa-miR-372-5p 0 0 1
chr9:113162978|113163150 hsa-miR-372-3p 0 0 1
chr9:113162978|113163150 hsa-miR-373-5p 0 0 1
chr9:113162978|113163150 hsa-miR-373-3p 0 0 1
chr9:113162978|113163150 hsa-miR-135b-5p 0 0 1
chr9:113162978|113163150 hsa-miR-135b-3p 0 0 1
chr9:113162978|113163150 hsa-miR-18b-5p 0 0 1
chr9:113162978|113163150 hsa-miR-18b-3p 0 0 1
chr9:113162978|113163150 hsa-miR-520e-5p 0 0 1
chr9:113162978|113163150 hsa-miR-520e-3p 0 0 1
chr9:113162978|113163150 hsa-miR-520b-5p 0 0 1
chr9:113162978|113163150 hsa-miR-520b-3p 0 0 1
chr9:113162978|113163150 hsa-miR-520g-5p 0 0 1
chr9:113162978|113163150 hsa-miR-520g-3p 0 0 1
chr9:113162978|113163150 hsa-miR-520h 0 0 1
chr9:113162978|113163150 hsa-miR-561-5p 0 0 1
chr9:113162978|113163150 hsa-miR-561-3p 0 0 1
chr9:113162978|113163150 hsa-miR-591 0 0 1
chr9:113162978|113163150 hsa-miR-641 0 0 1
chr9:113162978|113163150 hsa-miR-661 1 0 1
chr9:113162978|113163150 hsa-miR-765 0 0 1
chr9:113162978|113163150 hsa-miR-208b-5p 0 0 1
chr9:113162978|113163150 hsa-miR-208b-3p 0 0 1
chr9:113162978|113163150 hsa-miR-1253 0 0 1
chr9:113162978|113163150 hsa-miR-302e 0 0 1
chr9:113162978|113163150 hsa-miR-1277-5p 0 0 1
chr9:113162978|113163150 hsa-miR-1277-3p 0 0 1
chr9:113162978|113163150 hsa-miR-1252-5p 0 0 1
chr9:113162978|113163150 hsa-miR-1252-3p 0 0 1
chr9:113162978|113163150 hsa-miR-296-5p 0 0 1
chr9:113162978|113163150 hsa-miR-512-3p 0 0 1
chr9:113162978|113163150 hsa-miR-508-5p 0 0 1
chr9:113162978|113163150 hsa-miR-520d-3p 0 0 1
chr9:113162978|113163150 hsa-miR-520a-3p 0 0 1
chr9:113162978|113163150 hsa-miR-520c-3p 0 0 1
chr9:113162978|113163150 hsa-miR-1300 0 0 1
chr9:113162978|113163150 hsa-miR-135a 0 0 1
chr9:113162978|113163150 hsa-miR-1254 0 0 1
chr9:113162978|113163150 hsa-miR-499-5p 0 0 1
chr9:113162978|113163150 hsa-miR-612 1 0 0
chr9:113162978|113163150 hsa-miR-762 1 0 0
chr9:113162978|113163150 hsa-miR-2861 1 0 0
chr9:113162978|113163150 hsa-miR-3154 1 0 0
chr9:113162978|113163150 hsa-miR-3193 1 0 0
chr9:113162978|113163150 hsa-miR-4270 1 0 0
chr9:113162978|113163150 hsa-miR-3652 1 0 0
chr9:113162978|113163150 hsa-miR-3916 1 0 0
chr9:113162978|113163150 hsa-miR-4430 1 0 0
chr9:113162978|113163150 hsa-miR-4476 1 0 0
chr9:113162978|113163150 hsa-miR-4478 1 0 0
chr9:113162978|113163150 hsa-miR-4486 1 0 0
chr9:113162978|113163150 hsa-miR-4487 1 0 0
chr9:113162978|113163150 hsa-miR-4498 1 0 0
chr9:113162978|113163150 hsa-miR-4505 1 0 0
chr9:113162978|113163150 hsa-miR-4507 1 0 0
chr9:113162978|113163150 hsa-miR-4508 1 0 0
chr9:113162978|113163150 hsa-miR-4533 1 0 0
chr9:113162978|113163150 hsa-miR-1587 1 0 0
chr9:113162978|113163150 hsa-miR-4651 1 0 0
chr9:113162978|113163150 hsa-miR-4656 1 0 0
chr9:113162978|113163150 hsa-miR-4663 1 0 0
chr9:113162978|113163150 hsa-miR-4669 1 0 0
chr9:113162978|113163150 hsa-miR-4688 1 0 0
chr9:113162978|113163150 hsa-miR-4706 1 0 0
chr9:113162978|113163150 hsa-miR-4739 1 0 0
chr9:113162978|113163150 hsa-miR-4741 1 0 0
chr9:113162978|113163150 hsa-miR-5194 1 0 0
chr9:113162978|113163150 hsa-miR-5787 1 0 0
chr9:113162978|113163150 hsa-miR-6081 1 0 0
chr9:113162978|113163150 hsa-miR-6085 1 0 0
chr9:113162978|113163150 hsa-miR-6086 1 0 0
chr9:113162978|113163150 hsa-miR-6090 1 0 0
chr9:113162978|113163150 hsa-miR-6860 1 0 0
chr9:113162978|113163150 hsa-miR-7974 1 0 0
chr9:113162978|113163150 hsa-miR-8077 1 0 0
chr9:113162978|113163150 hsa-miR-8089 1 0 0
chr9:113162978|113163150 hsa-miR-6765-5p 1 0 0
chr9:113162978|113163150 hsa-miR-6861-5p 1 0 0
chr9:113162978|113163150 hsa-miR-6894-5p 1 0 0
chr9:113162978|113163150 hsa-miR-6799-5p 1 0 0
chr9:113162978|113163150 hsa-miR-6880-5p 1 0 0
chr9:113162978|113163150 hsa-miR-4722-5p 1 0 0
chr9:113162978|113163150 hsa-miR-6730-5p 1 0 0
chr9:113162978|113163150 hsa-miR-6806-5p 1 0 0
chr9:113162978|113163150 hsa-miR-6721-5p 1 0 0
chr9:113162978|113163150 hsa-miR-197-5p 1 0 0
chr9:113162978|113163150 hsa-miR-6716-5p 1 0 0
chr9:113162978|113163150 hsa-miR-185-3p 1 0 0
chr9:113162978|113163150 hsa-miR-6829-5p 1 0 0
chr9:113162978|113163150 hsa-miR-6798-5p 1 0 0
chr9:113162978|113163150 hsa-miR-6782-5p 1 0 0
chr9:113162978|113163150 hsa-miR-5006-5p 1 0 0
chr9:113162978|113163150 hsa-miR-6786-5p 1 0 0
chr9:113162978|113163150 hsa-miR-6784-5p 1 0 0
chr9:113162978|113163150 hsa-miR-296-3p 1 0 0
chr9:113162978|113163150 hsa-miR-6847-5p 1 0 0
chr9:113162978|113163150 hsa-miR-4446-3p 1 0 0
chr9:113162978|113163150 hsa-miR-149-3p 1 0 0
chr9:113162978|113163150 hsa-miR-4715-5p 1 0 0
chr9:113162978|113163150 hsa-miR-6761-5p 1 0 0
chr9:113162978|113163150 hsa-miR-6512-5p 1 0 0
chr9:113162978|113163150 hsa-miR-1207-5p 1 0 0
chr9:113162978|113163150 hsa-miR-1273h-5p 1 0 0
chr9:113162978|113163150 hsa-miR-6816-5p 1 0 0
chr9:113162978|113163150 hsa-miR-5001-5p 1 0 0
chr9:113162978|113163150 hsa-miR-6743-5p 1 0 0
chr9:113162978|113163150 hsa-miR-6756-5p 1 0 0
chr9:113162978|113163150 hsa-miR-6813-5p 1 0 0
chr9:113162978|113163150 hsa-miR-1249-5p 1 0 0
chr9:113162978|113163150 hsa-miR-6797-5p 1 0 0
chr9:113162978|113163150 hsa-miR-3620-5p 1 0 0
chr9:113162978|113163150 hsa-miR-5196-5p 1 0 0
chr9:113162978|113163150 hsa-miR-1909-3p 1 0 0
chr9:113162978|113163150 hsa-miR-4685-5p 1 0 0
chr9:113162978|113163150 hsa-miR-6846-5p 1 0 0
chr9:113162978|113163150 hsa-miR-6848-5p 1 0 0
chr9:113162978|113163150 hsa-miR-6858-5p 1 0 0
chr9:113162978|113163150 hsa-miR-3187-5p 1 0 0
chr9:113162978|113163150 hsa-miR-939-5p 1 0 0
chr9:113162978|113163150 hsa-miR-4758-5p 1 0 0
chr9:113162978|113163150 hsa-miR-6758-5p 1 0 0
chr9:113162978|113163150 hsa-miR-6856-5p 1 0 0
chr9:113162978|113163150 hsa-miR-4646-5p 1 0 0
chr9:113162978|113163150 hsa-miR-6724-5p 1 0 0
chr9:113162978|113163150 hsa-miR-6504-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr9:113162978|113163150
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MEFGSHCSNLPSQPAYVGPRHGLVS
Nucleotide Sequence CTGGAGTTCGGAAGCCATTGCAGCAACCTTCCTTCTCAGCCAGCCTACGTAGGGCCCAGGCATGGTCTTGTGTCTTAA
CircID chr9:113162978|113163150
ORF Type ORF2
Protein Length 30
Nucleotide Length 90
Protein Sequence MLPGVRKPLQQPSFSASLRRAQAWSCVLRQ
Nucleotide Sequence TTGCTCCCTGGAGTTCGGAAGCCATTGCAGCAACCTTCCTTCTCAGCCAGCCTACGTAGGGCCCAGGCATGGTCTTGTGTCTTAAGACAG
CircID chr9:113162978|113163150
ORF Type ORF3
Protein Length 38
Nucleotide Length 114
Protein Sequence MLQWLPNSREQVLASAQSFQGLGIRWRNSHQKKGQLEV
Nucleotide Sequence TTGCTGCAATGGCTTCCGAACTCCAGGGAGCAAGTGCTGGCTTCAGCTCAAAGTTTCCAGGGGCTGGGAATAAGGTGGAGGAATAGCCATCAGAAGAAAGGGCAGTTGGAAGTA
CircID chr9:113162978|113163150
ORF Type ORF4
Protein Length 29
Nucleotide Length 90
Protein Sequence MAEKEGCCNGFRTPGSKCWLQLKVSRGWE
Nucleotide Sequence CTGGCTGAGAAGGAAGGTTGCTGCAATGGCTTCCGAACTCCAGGGAGCAAGTGCTGGCTTCAGCTCAAAGTTTCCAGGGGCTGGGAATAA
CircID chr9:113162978|113163150
ORF Type ORF5
Protein Length 40
Nucleotide Length 123
Protein Sequence MPGPYVGWLRRKVAAMASELQGASAGFSSKFPGAGNKVEE
Nucleotide Sequence ATGCCTGGGCCCTACGTAGGCTGGCTGAGAAGGAAGGTTGCTGCAATGGCTTCCGAACTCCAGGGAGCAAGTGCTGGCTTCAGCTCAAAGTTTCCAGGGGCTGGGAATAAGGTGGAGGAATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab