CircRNA Information

General Information
circRNA Basic Information
CircID chr9:113370045|113370192
Strand +
CircType exon
Host Gene ENSG00000119411.10;
Algorism CIRI2;
Sequence ATGGCCTGAAAGGGTGGTGGGCGGTGGACCTGGCTTCCTGTGGCCAGAGGTCAGCGGACGATAGAAATGGTCTGATCGGCCACAGCAAAGACTGGGAAGAGGGGCCCCGGGAAGGACACATGATGGGCACAGAGCACTGTGCCGGAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:113370045|113370192 hsa-miR-383-5p 0 0 1
chr9:113370045|113370192 hsa-miR-383-3p 0 0 1
chr9:113370045|113370192 hsa-miR-588 0 1 1
chr9:113370045|113370192 hsa-miR-1236-5p 0 0 1
chr9:113370045|113370192 hsa-miR-1236-3p 0 0 1
chr9:113370045|113370192 hsa-miR-663b 0 0 1
chr9:113370045|113370192 hsa-miR-671-5p 0 0 1
chr9:113370045|113370192 hsa-miR-296-5p 0 1 1
chr9:113370045|113370192 hsa-miR-220b 0 0 1
chr9:113370045|113370192 hsa-miR-128 0 0 1
chr9:113370045|113370192 hsa-miR-326 1 0 0
chr9:113370045|113370192 hsa-miR-637 1 0 0
chr9:113370045|113370192 hsa-miR-4449 1 0 0
chr9:113370045|113370192 hsa-miR-5691 0 1 0
chr9:113370045|113370192 hsa-miR-10226 1 1 0
chr9:113370045|113370192 hsa-miR-197-3p 1 0 0
chr9:113370045|113370192 hsa-miR-4728-3p 1 0 0
chr9:113370045|113370192 hsa-miR-7108-5p 0 1 0
chr9:113370045|113370192 hsa-miR-877-3p 0 1 0
chr9:113370045|113370192 hsa-miR-6858-3p 1 0 0
chr9:113370045|113370192 hsa-miR-1343-3p 1 1 0
chr9:113370045|113370192 hsa-miR-615-5p 1 0 0
chr9:113370045|113370192 hsa-miR-939-3p 1 0 0
chr9:113370045|113370192 hsa-miR-4786-3p 0 1 0
chr9:113370045|113370192 hsa-miR-1908-3p 1 0 0
chr9:113370045|113370192 hsa-miR-6803-3p 1 0 0
chr9:113370045|113370192 hsa-miR-6785-3p 1 0 0
chr9:113370045|113370192 hsa-miR-216a-3p 0 1 0
chr9:113370045|113370192 hsa-miR-1914-5p 1 0 0
chr9:113370045|113370192 hsa-miR-4649-3p 1 0 0
chr9:113370045|113370192 hsa-miR-6734-3p 1 1 0
chr9:113370045|113370192 hsa-miR-6729-3p 1 0 0
chr9:113370045|113370192 hsa-miR-6890-3p 1 0 0
chr9:113370045|113370192 hsa-miR-6509-3p 1 1 0
chr9:113370045|113370192 hsa-miR-6502-3p 0 1 0
chr9:113370045|113370192 hsa-miR-5008-3p 1 0 0
chr9:113370045|113370192 hsa-miR-324-3p 1 0 0
chr9:113370045|113370192 hsa-miR-6511a-3p 0 1 0
chr9:113370045|113370192 hsa-miR-6511b-3p 0 1 0
chr9:113370045|113370192 hsa-miR-6744-3p 0 1 0
chr9:113370045|113370192 hsa-miR-3681-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr9:113370045|113370192
ORF Type ORF1
Protein Length 47
Nucleotide Length 141
Protein Sequence MKGWWAVDLASCGQRSADDRNGLIGHSKDWEEGPREGHMMGTEHCAG
Nucleotide Sequence CTGAAAGGGTGGTGGGCGGTGGACCTGGCTTCCTGTGGCCAGAGGTCAGCGGACGATAGAAATGGTCTGATCGGCCACAGCAAAGACTGGGAAGAGGGGCCCCGGGAAGGACACATGATGGGCACAGAGCACTGTGCCGGA

CircID chr9:113370045|113370192
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence MCPSRGPSSQSLLWPIRPFLSSADLWPQEARSTAHHPFRP
Nucleotide Sequence ATGTGTCCTTCCCGGGGCCCCTCTTCCCAGTCTTTGCTGTGGCCGATCAGACCATTTCTATCGTCCGCTGACCTCTGGCCACAGGAAGCCAGGTCCACCGCCCACCACCCTTTCAGGCCA

CircID chr9:113370045|113370192
ORF Type ORF3
Protein Length 44
Nucleotide Length 132
Protein Sequence MCPSCVLPGAPLPSLCCGRSDHFYRPLTSGHRKPGPPPTTLSGH
Nucleotide Sequence CTGTGCCCATCATGTGTCCTTCCCGGGGCCCCTCTTCCCAGTCTTTGCTGTGGCCGATCAGACCATTTCTATCGTCCGCTGACCTCTGGCCACAGGAAGCCAGGTCCACCGCCCACCACCCTTTCAGGCCAT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites