CircRNA Information

General Information
circRNA Basic Information
CircID chr9:113374284|113374473
Strand +
CircType exon
Host Gene ENSG00000119431.8;
Algorism CIRI2;
Sequence CCACAAGGCCTGGAAAGAGGTGATTGTTAGGTTGCGCAGAGGTGGTCTTATCCAGCTCAGCTTCCCCTGGGACCCACCGTGGGACCTGAGGCAGAACTGGGGTGGACTTGGCCTCCTCCATGGCACACCGGCTGCAGATACGACTGCTGACGTGGGATGTGAAGGACACGCTGCTCAGGCTCCGCCACCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:113374284|113374473 hsa-miR-23a-5p 0 0 1
chr9:113374284|113374473 hsa-miR-23a-3p 0 0 1
chr9:113374284|113374473 hsa-miR-205-5p 0 0 1
chr9:113374284|113374473 hsa-miR-205-3p 0 0 1
chr9:113374284|113374473 hsa-miR-214-5p 0 0 1
chr9:113374284|113374473 hsa-miR-214-3p 0 0 1
chr9:113374284|113374473 hsa-miR-23b-5p 0 0 1
chr9:113374284|113374473 hsa-miR-23b-3p 0 0 1
chr9:113374284|113374473 hsa-miR-503-5p 0 0 1
chr9:113374284|113374473 hsa-miR-503-3p 0 0 1
chr9:113374284|113374473 hsa-miR-558 0 0 1
chr9:113374284|113374473 hsa-miR-662 0 0 1
chr9:113374284|113374473 hsa-miR-765 0 0 1
chr9:113374284|113374473 hsa-miR-922 0 0 1
chr9:113374284|113374473 hsa-miR-1227-5p 0 0 1
chr9:113374284|113374473 hsa-miR-1227-3p 0 0 1
chr9:113374284|113374473 hsa-miR-1205 0 0 1
chr9:113374284|113374473 hsa-miR-1287-5p 0 0 1
chr9:113374284|113374473 hsa-miR-1287-3p 0 0 1
chr9:113374284|113374473 hsa-miR-1261 0 0 1
chr9:113374284|113374473 hsa-miR-1184 0 0 1
chr9:113374284|113374473 hsa-miR-2861 1 0 0
chr9:113374284|113374473 hsa-miR-3137 1 0 0
chr9:113374284|113374473 hsa-miR-4634 1 0 0
chr9:113374284|113374473 hsa-miR-4730 1 0 0
chr9:113374284|113374473 hsa-miR-6078 1 0 0
chr9:113374284|113374473 hsa-miR-187-3p 1 0 0
chr9:113374284|113374473 hsa-miR-25-5p 1 0 0
chr9:113374284|113374473 hsa-miR-6089 1 0 0
chr9:113374284|113374473 hsa-miR-5001-3p 1 0 0
chr9:113374284|113374473 hsa-miR-4783-5p 1 0 0
chr9:113374284|113374473 hsa-miR-6811-3p 1 0 0
chr9:113374284|113374473 hsa-miR-654-3p 1 0 0
chr9:113374284|113374473 hsa-miR-1237-5p 1 0 0
chr9:113374284|113374473 hsa-miR-3187-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr9:113374284|113374473
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MGPTVGPEAELGWTWPPPWHTGCRYDC
Nucleotide Sequence CTGGGACCCACCGTGGGACCTGAGGCAGAACTGGGGTGGACTTGGCCTCCTCCATGGCACACCGGCTGCAGATACGACTGCTGA

CircID chr9:113374284|113374473
ORF Type ORF2
Protein Length 53
Nucleotide Length 159
Protein Sequence MRRGGLIQLSFPWDPPWDLRQNWGGLGLLHGTPAADTTADVGCEGHAAQAPPP
Nucleotide Sequence TTGCGCAGAGGTGGTCTTATCCAGCTCAGCTTCCCCTGGGACCCACCGTGGGACCTGAGGCAGAACTGGGGTGGACTTGGCCTCCTCCATGGCACACCGGCTGCAGATACGACTGCTGACGTGGGATGTGAAGGACACGCTGCTCAGGCTCCGCCACCC

CircID chr9:113374284|113374473
ORF Type ORF3
Protein Length 27
Nucleotide Length 81
Protein Sequence MASSMAHRLQIRLLTWDVKDTLLRLRH
Nucleotide Sequence TTGGCCTCCTCCATGGCACACCGGCTGCAGATACGACTGCTGACGTGGGATGTGAAGGACACGCTGCTCAGGCTCCGCCAC

CircID chr9:113374284|113374473
ORF Type ORF4
Protein Length 59
Nucleotide Length 177
Protein Sequence MSSVSFTSHVSSRICSRCAMEEAKSTPVLPQVPRWVPGEAELDKTTSAQPNNHLFPGLV
Nucleotide Sequence CTGAGCAGCGTGTCCTTCACATCCCACGTCAGCAGTCGTATCTGCAGCCGGTGTGCCATGGAGGAGGCCAAGTCCACCCCAGTTCTGCCTCAGGTCCCACGGTGGGTCCCAGGGGAAGCTGAGCTGGATAAGACCACCTCTGCGCAACCTAACAATCACCTCTTTCCAGGCCTTGTG

CircID chr9:113374284|113374473
ORF Type ORF5
Protein Length 26
Nucleotide Length 81
Protein Sequence MQPVCHGGGQVHPSSASGPTVGPRGS
Nucleotide Sequence CTGCAGCCGGTGTGCCATGGAGGAGGCCAAGTCCACCCCAGTTCTGCCTCAGGTCCCACGGTGGGTCCCAGGGGAAGCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites