CircRNA Information

General Information
circRNA Basic Information
CircID chr9:114028100|114028336
Strand -
CircType exon
Host Gene ENSG00000157657.13;
Algorism CIRI2;
Sequence TCCAGCTTCTACGGACTTTTCAGGTGAGGGAGGCAGGGGGCCTGGGTAATGGTGATGCAGGGTTCCCCAGACAGCATCCAGGAACTGCTACACTTATTTCAATTAAAGCGTCAGGTGTCCCATGAGAGCAACAGTTCCCAGTCAGTGCCCACAAGGCACCACAGAGCCCCTTGCCCTAAAACCTTGGAGGGACTATCAGGCCCCTCTGCCTCACCCCCAGCCCCGGCATGTCCCTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:114028100|114028336 hsa-miR-595 0 0 1
chr9:114028100|114028336 hsa-miR-626 0 0 1
chr9:114028100|114028336 hsa-miR-637 1 0 1
chr9:114028100|114028336 hsa-miR-1296-5p 0 0 1
chr9:114028100|114028336 hsa-miR-1296-3p 0 0 1
chr9:114028100|114028336 hsa-miR-760 1 1 1
chr9:114028100|114028336 hsa-miR-1231 1 1 1
chr9:114028100|114028336 hsa-miR-1292-5p 0 0 1
chr9:114028100|114028336 hsa-miR-1292-3p 0 0 1
chr9:114028100|114028336 hsa-miR-1827 0 0 1
chr9:114028100|114028336 hsa-miR-423-5p 0 0 1
chr9:114028100|114028336 hsa-miR-885-5p 0 1 1
chr9:114028100|114028336 hsa-miR-1302 0 1 1
chr9:114028100|114028336 hsa-miR-1308 0 0 1
chr9:114028100|114028336 hsa-miR-203 0 0 1
chr9:114028100|114028336 hsa-miR-1201 0 0 1
chr9:114028100|114028336 hsa-miR-663a 1 0 0
chr9:114028100|114028336 hsa-miR-762 1 1 0
chr9:114028100|114028336 hsa-miR-1976 0 1 0
chr9:114028100|114028336 hsa-miR-2861 1 0 0
chr9:114028100|114028336 hsa-miR-4313 1 1 0
chr9:114028100|114028336 hsa-miR-3652 1 0 0
chr9:114028100|114028336 hsa-miR-4440 1 0 0
chr9:114028100|114028336 hsa-miR-4449 1 0 0
chr9:114028100|114028336 hsa-miR-4469 0 1 0
chr9:114028100|114028336 hsa-miR-4492 0 1 0
chr9:114028100|114028336 hsa-miR-4507 1 0 0
chr9:114028100|114028336 hsa-miR-4508 1 1 0
chr9:114028100|114028336 hsa-miR-1587 1 0 0
chr9:114028100|114028336 hsa-miR-4651 1 0 0
chr9:114028100|114028336 hsa-miR-4656 1 0 0
chr9:114028100|114028336 hsa-miR-4658 1 1 0
chr9:114028100|114028336 hsa-miR-4688 1 0 0
chr9:114028100|114028336 hsa-miR-4710 0 1 0
chr9:114028100|114028336 hsa-miR-4741 1 0 0
chr9:114028100|114028336 hsa-miR-5572 1 0 0
chr9:114028100|114028336 hsa-miR-5705 1 0 0
chr9:114028100|114028336 hsa-miR-5787 1 1 0
chr9:114028100|114028336 hsa-miR-6085 1 1 0
chr9:114028100|114028336 hsa-miR-6086 1 0 0
chr9:114028100|114028336 hsa-miR-8059 0 1 0
chr9:114028100|114028336 hsa-miR-8089 1 0 0
chr9:114028100|114028336 hsa-miR-211-3p 1 1 0
chr9:114028100|114028336 hsa-miR-4747-3p 1 0 0
chr9:114028100|114028336 hsa-miR-6747-3p 0 1 0
chr9:114028100|114028336 hsa-miR-6836-3p 0 1 0
chr9:114028100|114028336 hsa-miR-210-5p 1 0 0
chr9:114028100|114028336 hsa-miR-6799-5p 1 0 0
chr9:114028100|114028336 hsa-miR-6741-5p 1 1 0
chr9:114028100|114028336 hsa-miR-6727-5p 1 0 0
chr9:114028100|114028336 hsa-miR-6759-5p 1 0 0
chr9:114028100|114028336 hsa-miR-6721-5p 1 0 0
chr9:114028100|114028336 hsa-miR-4728-3p 1 0 0
chr9:114028100|114028336 hsa-miR-7845-5p 0 1 0
chr9:114028100|114028336 hsa-miR-1915-5p 1 0 0
chr9:114028100|114028336 hsa-miR-491-5p 1 1 0
chr9:114028100|114028336 hsa-miR-4725-5p 1 0 0
chr9:114028100|114028336 hsa-miR-185-3p 1 0 0
chr9:114028100|114028336 hsa-miR-6829-5p 1 0 0
chr9:114028100|114028336 hsa-miR-6732-5p 1 0 0
chr9:114028100|114028336 hsa-miR-6805-5p 1 0 0
chr9:114028100|114028336 hsa-miR-2467-5p 1 0 0
chr9:114028100|114028336 hsa-miR-6798-5p 1 0 0
chr9:114028100|114028336 hsa-miR-6881-5p 1 0 0
chr9:114028100|114028336 hsa-miR-2467-3p 0 1 0
chr9:114028100|114028336 hsa-miR-5006-5p 1 0 0
chr9:114028100|114028336 hsa-miR-6786-5p 1 0 0
chr9:114028100|114028336 hsa-miR-7109-5p 1 0 0
chr9:114028100|114028336 hsa-miR-1226-5p 1 0 0
chr9:114028100|114028336 hsa-miR-6784-5p 1 1 0
chr9:114028100|114028336 hsa-miR-4640-5p 1 0 0
chr9:114028100|114028336 hsa-miR-7113-3p 0 1 0
chr9:114028100|114028336 hsa-miR-296-3p 1 0 0
chr9:114028100|114028336 hsa-miR-6823-5p 1 0 0
chr9:114028100|114028336 hsa-miR-6749-5p 1 0 0
chr9:114028100|114028336 hsa-miR-4787-5p 1 0 0
chr9:114028100|114028336 hsa-miR-4446-3p 1 0 0
chr9:114028100|114028336 hsa-miR-2115-5p 1 0 0
chr9:114028100|114028336 hsa-miR-7106-3p 0 1 0
chr9:114028100|114028336 hsa-miR-7112-3p 1 1 0
chr9:114028100|114028336 hsa-miR-6778-3p 0 1 0
chr9:114028100|114028336 hsa-miR-6752-3p 0 1 0
chr9:114028100|114028336 hsa-miR-3620-3p 1 1 0
chr9:114028100|114028336 hsa-miR-219a-2-3p 1 0 0
chr9:114028100|114028336 hsa-miR-329-5p 0 1 0
chr9:114028100|114028336 hsa-miR-6732-3p 1 1 0
chr9:114028100|114028336 hsa-miR-367-5p 0 1 0
chr9:114028100|114028336 hsa-miR-1207-5p 1 1 0
chr9:114028100|114028336 hsa-miR-4763-3p 1 1 0
chr9:114028100|114028336 hsa-miR-6812-5p 1 0 0
chr9:114028100|114028336 hsa-miR-6816-5p 1 0 0
chr9:114028100|114028336 hsa-miR-6870-5p 1 0 0
chr9:114028100|114028336 hsa-miR-6775-5p 1 0 0
chr9:114028100|114028336 hsa-miR-1343-5p 1 0 0
chr9:114028100|114028336 hsa-miR-5001-5p 1 1 0
chr9:114028100|114028336 hsa-miR-6743-5p 1 0 0
chr9:114028100|114028336 hsa-miR-6752-5p 1 1 0
chr9:114028100|114028336 hsa-miR-6754-5p 1 0 0
chr9:114028100|114028336 hsa-miR-6756-5p 1 0 0
chr9:114028100|114028336 hsa-miR-6803-5p 1 1 0
chr9:114028100|114028336 hsa-miR-6813-5p 1 1 0
chr9:114028100|114028336 hsa-miR-6842-5p 1 0 0
chr9:114028100|114028336 hsa-miR-7110-5p 1 1 0
chr9:114028100|114028336 hsa-miR-6722-3p 1 0 0
chr9:114028100|114028336 hsa-miR-6751-5p 1 1 0
chr9:114028100|114028336 hsa-miR-3620-5p 1 0 0
chr9:114028100|114028336 hsa-miR-6862-5p 1 0 0
chr9:114028100|114028336 hsa-miR-10396a-5p 1 0 0
chr9:114028100|114028336 hsa-miR-1909-3p 1 0 0
chr9:114028100|114028336 hsa-miR-328-5p 1 0 0
chr9:114028100|114028336 hsa-miR-4632-5p 1 0 0
chr9:114028100|114028336 hsa-miR-4649-5p 1 0 0
chr9:114028100|114028336 hsa-miR-4685-5p 1 1 0
chr9:114028100|114028336 hsa-miR-4749-5p 0 1 0
chr9:114028100|114028336 hsa-miR-6729-5p 1 0 0
chr9:114028100|114028336 hsa-miR-6735-5p 1 0 0
chr9:114028100|114028336 hsa-miR-6846-5p 1 1 0
chr9:114028100|114028336 hsa-miR-6848-5p 1 1 0
chr9:114028100|114028336 hsa-miR-939-5p 1 0 0
chr9:114028100|114028336 hsa-miR-6511a-5p 0 1 0
chr9:114028100|114028336 hsa-miR-3940-5p 1 0 0
chr9:114028100|114028336 hsa-miR-6799-3p 1 0 0
chr9:114028100|114028336 hsa-miR-4700-5p 0 1 0
chr9:114028100|114028336 hsa-miR-3184-5p 0 1 0
chr9:114028100|114028336 hsa-miR-6893-3p 1 0 0
chr9:114028100|114028336 hsa-miR-6756-3p 1 0 0
chr9:114028100|114028336 hsa-miR-6801-3p 0 1 0
chr9:114028100|114028336 hsa-miR-6810-3p 0 1 0
chr9:114028100|114028336 hsa-miR-6876-3p 0 1 0
chr9:114028100|114028336 hsa-miR-10397-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr9:114028100|114028336
ORF Type ORF1
Protein Length 63
Nucleotide Length 189
Protein Sequence MVMQGSPDSIQELLHLFQLKRQVSHESNSSQSVPTRHHRAPCPKTLEGLSGPSASPPAPACPC
Nucleotide Sequence ATGGTGATGCAGGGTTCCCCAGACAGCATCCAGGAACTGCTACACTTATTTCAATTAAAGCGTCAGGTGTCCCATGAGAGCAACAGTTCCCAGTCAGTGCCCACAAGGCACCACAGAGCCCCTTGCCCTAAAACCTTGGAGGGACTATCAGGCCCCTCTGCCTCACCCCCAGCCCCGGCATGTCCCTGC
CircID chr9:114028100|114028336
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence MRATVPSQCPQGTTEPLALKPWRDYQAPLPHPQPRHVP
Nucleotide Sequence ATGAGAGCAACAGTTCCCAGTCAGTGCCCACAAGGCACCACAGAGCCCCTTGCCCTAAAACCTTGGAGGGACTATCAGGCCCCTCTGCCTCACCCCCAGCCCCGGCATGTCCCT
CircID chr9:114028100|114028336
ORF Type ORF3
Protein Length 27
Nucleotide Length 84
Protein Sequence MGNGDAGFPRQHPGTATLISIKASGVP
Nucleotide Sequence CTGGGTAATGGTGATGCAGGGTTCCCCAGACAGCATCCAGGAACTGCTACACTTATTTCAATTAAAGCGTCAGGTGTCCCATGA
CircID chr9:114028100|114028336
ORF Type ORF4
Protein Length 27
Nucleotide Length 81
Protein Sequence MDAVWGTLHHHYPGPLPPSPEKSVEAG
Nucleotide Sequence CTGGATGCTGTCTGGGGAACCCTGCATCACCATTACCCAGGCCCCCTGCCTCCCTCACCTGAAAAGTCCGTAGAAGCTGGA
CircID chr9:114028100|114028336
ORF Type ORF5
Protein Length 44
Nucleotide Length 135
Protein Sequence MWALTGNCCSHGTPDALIEISVAVPGCCLGNPASPLPRPPASLT
Nucleotide Sequence TTGTGGGCACTGACTGGGAACTGTTGCTCTCATGGGACACCTGACGCTTTAATTGAAATAAGTGTAGCAGTTCCTGGATGCTGTCTGGGGAACCCTGCATCACCATTACCCAGGCCCCCTGCCTCCCTCACCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab