CircRNA Information

General Information
circRNA Basic Information
CircID chr9:116698649|116698748
Strand -
CircType exon
Host Gene ENSG00000119401.10;
Algorism CIRI2;
Sequence GTGGAAGATTCCTGGGCCATGGAGGCCACAGCGTCTGCTGCCTCTACCTCTGTTACTTTTAGAGAGATGGACATGAGCCCGGAGGAAGTGGTTGCCAGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:116698649|116698748 hsa-let-7b-5p 0 0 1
chr9:116698649|116698748 hsa-let-7b-3p 0 0 1
chr9:116698649|116698748 hsa-let-7c-5p 0 0 1
chr9:116698649|116698748 hsa-let-7c-3p 0 0 1
chr9:116698649|116698748 hsa-let-7d-5p 0 0 1
chr9:116698649|116698748 hsa-let-7d-3p 0 0 1
chr9:116698649|116698748 hsa-let-7e-5p 0 0 1
chr9:116698649|116698748 hsa-let-7e-3p 0 0 1
chr9:116698649|116698748 hsa-miR-98-5p 0 0 1
chr9:116698649|116698748 hsa-miR-98-3p 0 0 1
chr9:116698649|116698748 hsa-let-7g-5p 0 0 1
chr9:116698649|116698748 hsa-let-7g-3p 0 0 1
chr9:116698649|116698748 hsa-let-7i-5p 0 0 1
chr9:116698649|116698748 hsa-let-7i-3p 0 0 1
chr9:116698649|116698748 hsa-miR-559 0 0 1
chr9:116698649|116698748 hsa-miR-802 0 0 1
chr9:116698649|116698748 hsa-miR-922 0 0 1
chr9:116698649|116698748 hsa-miR-663b 0 0 1
chr9:116698649|116698748 hsa-miR-548j-5p 0 0 1
chr9:116698649|116698748 hsa-miR-548j-3p 0 0 1
chr9:116698649|116698748 hsa-miR-548n 0 0 1
chr9:116698649|116698748 hsa-miR-1827 0 1 1
chr9:116698649|116698748 hsa-miR-548b-5p 0 0 1
chr9:116698649|116698748 hsa-miR-548d-5p 0 0 1
chr9:116698649|116698748 hsa-miR-548c-5p 0 0 1
chr9:116698649|116698748 hsa-miR-548a-5p 0 0 1
chr9:116698649|116698748 hsa-miR-548i 0 0 1
chr9:116698649|116698748 hsa-let-7a 0 0 1
chr9:116698649|116698748 hsa-let-7f 0 0 1
chr9:116698649|116698748 hsa-miR-194 0 0 1
chr9:116698649|116698748 hsa-miR-548h 0 0 1
chr9:116698649|116698748 hsa-miR-4257 0 1 0
chr9:116698649|116698748 hsa-miR-4458 0 1 0
chr9:116698649|116698748 hsa-miR-4688 1 1 0
chr9:116698649|116698748 hsa-miR-7108-5p 0 1 0
chr9:116698649|116698748 hsa-let-7a-5p 0 1 0
chr9:116698649|116698748 hsa-miR-1255b-2-3p 0 1 0
chr9:116698649|116698748 hsa-miR-6847-3p 0 1 0
chr9:116698649|116698748 hsa-miR-6743-5p 1 1 0
chr9:116698649|116698748 hsa-miR-6831-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr9:116698649|116698748
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MEATASAASTSVTFREMDMSPEEVVAS
Nucleotide Sequence ATGGAGGCCACAGCGTCTGCTGCCTCTACCTCTGTTACTTTTAGAGAGATGGACATGAGCCCGGAGGAAGTGGTTGCCAGC

CircID chr9:116698649|116698748
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence LATTSSGLMSISLKVTEVEAADAVASMAQESS
Nucleotide Sequence CTGGCAACCACTTCCTCCGGGCTCATGTCCATCTCTCTAAAAGTAACAGAGGTAGAGGCAGCAGACGCTGTGGCCTCCATGGCCCAGGAATCTTCC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites