CircRNA Information

General Information
circRNA Basic Information
CircID chr9:120392783|120392879
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTCCTTACAATCTTTCAAAACCATCCCTTCTCCCCCACAGTCCTGACCCACTGCCCACCTGGGGGACTGCTGCAGCCCCCAAAGAGGTCTTCCCGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:120392783|120392879 hsa-miR-107 0 0 1
chr9:120392783|120392879 hsa-miR-34a-5p 0 0 1
chr9:120392783|120392879 hsa-miR-34a-3p 0 0 1
chr9:120392783|120392879 hsa-miR-449a 0 0 1
chr9:120392783|120392879 hsa-miR-488-5p 0 0 1
chr9:120392783|120392879 hsa-miR-488-3p 0 0 1
chr9:120392783|120392879 hsa-miR-625-5p 0 0 1
chr9:120392783|120392879 hsa-miR-625-3p 0 0 1
chr9:120392783|120392879 hsa-miR-449b-5p 0 0 1
chr9:120392783|120392879 hsa-miR-449b-3p 0 0 1
chr9:120392783|120392879 hsa-miR-541-5p 0 0 1
chr9:120392783|120392879 hsa-miR-541-3p 0 0 1
chr9:120392783|120392879 hsa-miR-1275 1 1 1
chr9:120392783|120392879 hsa-miR-491-5p 0 0 1
chr9:120392783|120392879 hsa-miR-1184 0 0 1
chr9:120392783|120392879 hsa-miR-654-5p 1 0 1
chr9:120392783|120392879 hsa-miR-361-3p 0 1 1
chr9:120392783|120392879 hsa-miR-34c-5p 1 1 1
chr9:120392783|120392879 hsa-miR-508-3p 0 0 1
chr9:120392783|120392879 hsa-miR-103 0 0 1
chr9:120392783|120392879 hsa-miR-7 0 0 1
chr9:120392783|120392879 hsa-miR-9 0 0 1
chr9:120392783|120392879 hsa-miR-608 1 1 0
chr9:120392783|120392879 hsa-miR-658 1 0 0
chr9:120392783|120392879 hsa-miR-762 1 0 0
chr9:120392783|120392879 hsa-miR-765 1 0 0
chr9:120392783|120392879 hsa-miR-760 1 0 0
chr9:120392783|120392879 hsa-miR-1183 1 0 0
chr9:120392783|120392879 hsa-miR-1293 1 0 0
chr9:120392783|120392879 hsa-miR-1258 1 0 0
chr9:120392783|120392879 hsa-miR-3138 1 0 0
chr9:120392783|120392879 hsa-miR-3147 1 0 0
chr9:120392783|120392879 hsa-miR-3154 1 1 0
chr9:120392783|120392879 hsa-miR-3169 0 1 0
chr9:120392783|120392879 hsa-miR-4298 1 0 0
chr9:120392783|120392879 hsa-miR-4271 1 0 0
chr9:120392783|120392879 hsa-miR-4274 0 1 0
chr9:120392783|120392879 hsa-miR-4436a 1 0 0
chr9:120392783|120392879 hsa-miR-4516 1 1 0
chr9:120392783|120392879 hsa-miR-4525 1 0 0
chr9:120392783|120392879 hsa-miR-4651 1 0 0
chr9:120392783|120392879 hsa-miR-4656 1 0 0
chr9:120392783|120392879 hsa-miR-4706 1 0 0
chr9:120392783|120392879 hsa-miR-4710 1 0 0
chr9:120392783|120392879 hsa-miR-4739 1 0 0
chr9:120392783|120392879 hsa-miR-4741 1 0 0
chr9:120392783|120392879 hsa-miR-5698 1 1 0
chr9:120392783|120392879 hsa-miR-5703 1 0 0
chr9:120392783|120392879 hsa-miR-5787 1 0 0
chr9:120392783|120392879 hsa-miR-6132 1 0 0
chr9:120392783|120392879 hsa-miR-6745 1 0 0
chr9:120392783|120392879 hsa-miR-6860 1 0 0
chr9:120392783|120392879 hsa-miR-7515 1 0 0
chr9:120392783|120392879 hsa-miR-7704 1 0 0
chr9:120392783|120392879 hsa-miR-8052 1 0 0
chr9:120392783|120392879 hsa-miR-8085 1 0 0
chr9:120392783|120392879 hsa-miR-11399 1 0 0
chr9:120392783|120392879 hsa-miR-12128 1 0 0
chr9:120392783|120392879 hsa-miR-6734-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6747-5p 1 0 0
chr9:120392783|120392879 hsa-miR-4433a-3p 1 0 0
chr9:120392783|120392879 hsa-miR-671-5p 1 0 0
chr9:120392783|120392879 hsa-miR-125b-1-3p 1 0 0
chr9:120392783|120392879 hsa-miR-3150a-3p 1 0 0
chr9:120392783|120392879 hsa-miR-6861-5p 1 0 0
chr9:120392783|120392879 hsa-miR-7106-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6825-5p 1 0 0
chr9:120392783|120392879 hsa-miR-4687-3p 1 0 0
chr9:120392783|120392879 hsa-miR-6799-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6728-5p 1 0 0
chr9:120392783|120392879 hsa-miR-5187-5p 1 0 0
chr9:120392783|120392879 hsa-miR-7114-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6757-5p 1 0 0
chr9:120392783|120392879 hsa-miR-7847-3p 1 0 0
chr9:120392783|120392879 hsa-miR-769-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6746-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6721-5p 1 0 0
chr9:120392783|120392879 hsa-miR-197-5p 1 0 0
chr9:120392783|120392879 hsa-miR-8069 0 1 0
chr9:120392783|120392879 hsa-miR-6742-5p 1 0 0
chr9:120392783|120392879 hsa-miR-3151-5p 1 0 0
chr9:120392783|120392879 hsa-miR-3180-3p 1 0 0
chr9:120392783|120392879 hsa-miR-6748-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6793-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6796-5p 1 1 0
chr9:120392783|120392879 hsa-miR-185-3p 0 1 0
chr9:120392783|120392879 hsa-miR-1224-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6760-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6782-5p 1 0 0
chr9:120392783|120392879 hsa-miR-5008-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6786-5p 1 0 0
chr9:120392783|120392879 hsa-miR-7109-5p 1 0 0
chr9:120392783|120392879 hsa-miR-1229-5p 1 1 0
chr9:120392783|120392879 hsa-miR-4640-5p 1 0 0
chr9:120392783|120392879 hsa-miR-30c-2-3p 1 0 0
chr9:120392783|120392879 hsa-miR-885-3p 1 0 0
chr9:120392783|120392879 hsa-miR-3127-5p 1 0 0
chr9:120392783|120392879 hsa-miR-1908-5p 1 0 0
chr9:120392783|120392879 hsa-miR-1228-5p 1 0 0
chr9:120392783|120392879 hsa-miR-296-3p 1 0 0
chr9:120392783|120392879 hsa-miR-92b-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6749-5p 1 0 0
chr9:120392783|120392879 hsa-miR-4446-3p 1 0 0
chr9:120392783|120392879 hsa-miR-149-3p 1 0 0
chr9:120392783|120392879 hsa-miR-937-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6824-5p 1 0 0
chr9:120392783|120392879 hsa-miR-194-3p 0 1 0
chr9:120392783|120392879 hsa-miR-483-5p 1 0 0
chr9:120392783|120392879 hsa-miR-3179 1 0 0
chr9:120392783|120392879 hsa-miR-10400-5p 1 0 0
chr9:120392783|120392879 hsa-miR-1207-5p 1 0 0
chr9:120392783|120392879 hsa-miR-4763-3p 1 0 0
chr9:120392783|120392879 hsa-miR-6769b-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6816-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6865-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6870-5p 1 1 0
chr9:120392783|120392879 hsa-miR-1343-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6737-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6756-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6769a-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6803-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6819-5p 1 0 0
chr9:120392783|120392879 hsa-miR-10401-5p 1 0 0
chr9:120392783|120392879 hsa-miR-11181-3p 1 0 0
chr9:120392783|120392879 hsa-miR-6751-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6763-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6779-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6780a-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6788-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6797-5p 1 0 0
chr9:120392783|120392879 hsa-miR-7111-5p 1 1 0
chr9:120392783|120392879 hsa-miR-5196-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6780b-5p 1 0 0
chr9:120392783|120392879 hsa-miR-328-5p 1 0 0
chr9:120392783|120392879 hsa-miR-449c-5p 1 0 0
chr9:120392783|120392879 hsa-miR-4649-5p 1 0 0
chr9:120392783|120392879 hsa-miR-4685-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6777-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6795-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6846-5p 0 1 0
chr9:120392783|120392879 hsa-miR-6848-5p 0 1 0
chr9:120392783|120392879 hsa-miR-6858-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6887-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6889-5p 1 0 0
chr9:120392783|120392879 hsa-miR-3187-5p 1 0 0
chr9:120392783|120392879 hsa-miR-4723-5p 1 0 0
chr9:120392783|120392879 hsa-miR-939-5p 1 0 0
chr9:120392783|120392879 hsa-miR-3199 1 0 0
chr9:120392783|120392879 hsa-miR-4769-5p 1 0 0
chr9:120392783|120392879 hsa-miR-1266-5p 1 0 0
chr9:120392783|120392879 hsa-miR-365a-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6731-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6758-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6736-5p 1 0 0
chr9:120392783|120392879 hsa-miR-4747-5p 1 0 0
chr9:120392783|120392879 hsa-miR-6891-5p 1 0 0
chr9:120392783|120392879 hsa-miR-4472 1 0 0
chr9:120392783|120392879 hsa-miR-4716-3p 1 0 0
chr9:120392783|120392879 hsa-miR-6785-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr9:120392783|120392879
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MGAAAVPQVGSGSGLWGRRDGFERL
Nucleotide Sequence TTGGGGGCTGCAGCAGTCCCCCAGGTGGGCAGTGGGTCAGGACTGTGGGGGAGAAGGGATGGTTTTGAAAGATTGTAA
CircID chr9:120392783|120392879
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MQQSPRWAVGQDCGGEGMVLKDCKE
Nucleotide Sequence CTGCAGCAGTCCCCCAGGTGGGCAGTGGGTCAGGACTGTGGGGGAGAAGGGATGGTTTTGAAAGATTGTAAGGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab