CircRNA Information

General Information
circRNA Basic Information
CircID chr9:120869741|120869885
Strand +
CircType exon
Host Gene ENSG00000119403.12;
Algorism CIRI2;
Sequence CTTGGTTCTGCCGACGCTGCATCTTCGCACTGGCTGTGCGGGTGAGCCTTCCATCCTCCCCAGTCCCTGCCTCTCCTGCCTCCTCCAGTGGGGCAGACCAGAGACTCCCATCACAGAGTCTGAGCTCCAAGCAGAAGGGCCACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:120869741|120869885 hsa-miR-328-5p 0 0 1
chr9:120869741|120869885 hsa-miR-328-3p 0 0 1
chr9:120869741|120869885 hsa-miR-326 0 0 1
chr9:120869741|120869885 hsa-miR-346 0 0 1
chr9:120869741|120869885 hsa-miR-432-5p 0 0 1
chr9:120869741|120869885 hsa-miR-432-3p 0 0 1
chr9:120869741|120869885 hsa-miR-575 0 0 1
chr9:120869741|120869885 hsa-miR-593-5p 0 0 1
chr9:120869741|120869885 hsa-miR-593-3p 0 0 1
chr9:120869741|120869885 hsa-miR-650 1 1 1
chr9:120869741|120869885 hsa-miR-765 1 1 1
chr9:120869741|120869885 hsa-miR-939-5p 0 0 1
chr9:120869741|120869885 hsa-miR-939-3p 0 0 1
chr9:120869741|120869885 hsa-miR-940 1 0 1
chr9:120869741|120869885 hsa-miR-1237-5p 0 0 1
chr9:120869741|120869885 hsa-miR-1237-3p 0 0 1
chr9:120869741|120869885 hsa-miR-663b 0 0 1
chr9:120869741|120869885 hsa-miR-1291 0 0 1
chr9:120869741|120869885 hsa-miR-1825 0 0 1
chr9:120869741|120869885 hsa-miR-1827 0 0 1
chr9:120869741|120869885 hsa-miR-1207-5p 1 1 1
chr9:120869741|120869885 hsa-miR-324-3p 0 0 1
chr9:120869741|120869885 hsa-miR-330-5p 0 0 1
chr9:120869741|120869885 hsa-miR-644 0 0 1
chr9:120869741|120869885 hsa-miR-637 1 0 0
chr9:120869741|120869885 hsa-miR-663a 1 0 0
chr9:120869741|120869885 hsa-miR-762 1 0 0
chr9:120869741|120869885 hsa-miR-760 1 0 0
chr9:120869741|120869885 hsa-miR-3131 1 0 0
chr9:120869741|120869885 hsa-miR-3155a 1 1 0
chr9:120869741|120869885 hsa-miR-3196 1 0 0
chr9:120869741|120869885 hsa-miR-3197 1 0 0
chr9:120869741|120869885 hsa-miR-4270 1 0 0
chr9:120869741|120869885 hsa-miR-3665 1 0 0
chr9:120869741|120869885 hsa-miR-4458 1 0 0
chr9:120869741|120869885 hsa-miR-3135b 1 0 0
chr9:120869741|120869885 hsa-miR-4463 1 0 0
chr9:120869741|120869885 hsa-miR-3155b 1 0 0
chr9:120869741|120869885 hsa-miR-4484 1 0 0
chr9:120869741|120869885 hsa-miR-4492 1 0 0
chr9:120869741|120869885 hsa-miR-4498 1 0 0
chr9:120869741|120869885 hsa-miR-4508 1 0 0
chr9:120869741|120869885 hsa-miR-4514 1 0 0
chr9:120869741|120869885 hsa-miR-4515 1 0 0
chr9:120869741|120869885 hsa-miR-1587 1 0 0
chr9:120869741|120869885 hsa-miR-4651 1 0 0
chr9:120869741|120869885 hsa-miR-4656 1 0 0
chr9:120869741|120869885 hsa-miR-4688 1 0 0
chr9:120869741|120869885 hsa-miR-4706 1 0 0
chr9:120869741|120869885 hsa-miR-4736 1 0 0
chr9:120869741|120869885 hsa-miR-4739 1 0 0
chr9:120869741|120869885 hsa-miR-4784 1 1 0
chr9:120869741|120869885 hsa-miR-5090 1 0 0
chr9:120869741|120869885 hsa-miR-5698 1 0 0
chr9:120869741|120869885 hsa-miR-5787 1 0 0
chr9:120869741|120869885 hsa-miR-6085 1 0 0
chr9:120869741|120869885 hsa-miR-6086 1 0 0
chr9:120869741|120869885 hsa-miR-6132 1 0 0
chr9:120869741|120869885 hsa-miR-6133 1 0 0
chr9:120869741|120869885 hsa-miR-6165 1 0 0
chr9:120869741|120869885 hsa-miR-7150 1 0 0
chr9:120869741|120869885 hsa-miR-8052 1 1 0
chr9:120869741|120869885 hsa-miR-8072 1 0 0
chr9:120869741|120869885 hsa-miR-8085 1 0 0
chr9:120869741|120869885 hsa-miR-17-3p 1 0 0
chr9:120869741|120869885 hsa-miR-4433b-3p 1 0 0
chr9:120869741|120869885 hsa-miR-92a-1-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6809-5p 1 0 0
chr9:120869741|120869885 hsa-miR-4433a-3p 1 0 0
chr9:120869741|120869885 hsa-miR-6765-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6861-5p 1 0 0
chr9:120869741|120869885 hsa-miR-7106-5p 1 1 0
chr9:120869741|120869885 hsa-miR-6825-5p 1 1 0
chr9:120869741|120869885 hsa-miR-6894-5p 1 1 0
chr9:120869741|120869885 hsa-miR-125a-3p 1 0 0
chr9:120869741|120869885 hsa-miR-25-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6854-5p 0 1 0
chr9:120869741|120869885 hsa-miR-6510-5p 1 0 0
chr9:120869741|120869885 hsa-miR-139-3p 1 0 0
chr9:120869741|120869885 hsa-miR-3622a-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6089 1 0 0
chr9:120869741|120869885 hsa-miR-6757-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6880-5p 1 0 0
chr9:120869741|120869885 hsa-miR-7847-3p 1 0 0
chr9:120869741|120869885 hsa-miR-4695-5p 1 1 0
chr9:120869741|120869885 hsa-miR-6746-5p 1 0 0
chr9:120869741|120869885 hsa-miR-4722-5p 1 1 0
chr9:120869741|120869885 hsa-miR-3622b-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6721-5p 1 0 0
chr9:120869741|120869885 hsa-miR-7845-5p 1 0 0
chr9:120869741|120869885 hsa-miR-3663-5p 0 1 0
chr9:120869741|120869885 hsa-miR-3605-5p 0 1 0
chr9:120869741|120869885 hsa-miR-6716-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6871-5p 0 1 0
chr9:120869741|120869885 hsa-miR-6732-5p 1 0 0
chr9:120869741|120869885 hsa-miR-486-3p 1 0 0
chr9:120869741|120869885 hsa-miR-2467-3p 1 0 0
chr9:120869741|120869885 hsa-miR-6782-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6888-5p 1 0 0
chr9:120869741|120869885 hsa-miR-5088-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6784-5p 1 0 0
chr9:120869741|120869885 hsa-miR-4640-5p 1 0 0
chr9:120869741|120869885 hsa-miR-885-3p 1 0 0
chr9:120869741|120869885 hsa-miR-1908-5p 1 0 0
chr9:120869741|120869885 hsa-let-7d-5p 1 0 0
chr9:120869741|120869885 hsa-miR-92b-5p 1 0 0
chr9:120869741|120869885 hsa-miR-149-3p 1 1 0
chr9:120869741|120869885 hsa-miR-6824-5p 1 0 0
chr9:120869741|120869885 hsa-miR-3162-5p 1 0 0
chr9:120869741|120869885 hsa-let-7g-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6781-5p 1 0 0
chr9:120869741|120869885 hsa-miR-7112-5p 1 0 0
chr9:120869741|120869885 hsa-let-7i-5p 1 0 0
chr9:120869741|120869885 hsa-let-7e-5p 1 0 0
chr9:120869741|120869885 hsa-let-7a-5p 1 0 0
chr9:120869741|120869885 hsa-miR-3944-5p 1 0 0
chr9:120869741|120869885 hsa-miR-5088-3p 0 1 0
chr9:120869741|120869885 hsa-miR-4679 0 1 0
chr9:120869741|120869885 hsa-miR-10400-5p 1 0 0
chr9:120869741|120869885 hsa-miR-1233-5p 1 0 0
chr9:120869741|120869885 hsa-miR-4763-3p 1 1 0
chr9:120869741|120869885 hsa-miR-6778-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6787-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6816-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6865-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6870-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6893-5p 1 1 0
chr9:120869741|120869885 hsa-miR-1343-5p 1 0 0
chr9:120869741|120869885 hsa-miR-5001-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6743-5p 1 1 0
chr9:120869741|120869885 hsa-miR-6754-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6756-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6803-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6813-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6851-5p 1 0 0
chr9:120869741|120869885 hsa-miR-11181-3p 1 1 0
chr9:120869741|120869885 hsa-miR-1249-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6722-3p 1 0 0
chr9:120869741|120869885 hsa-miR-6808-5p 1 1 0
chr9:120869741|120869885 hsa-miR-6879-5p 1 0 0
chr9:120869741|120869885 hsa-miR-7111-5p 1 1 0
chr9:120869741|120869885 hsa-miR-3620-5p 1 0 0
chr9:120869741|120869885 hsa-miR-4728-5p 1 0 0
chr9:120869741|120869885 hsa-miR-5196-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6780b-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6836-5p 1 0 0
chr9:120869741|120869885 hsa-miR-10396b-5p 1 0 0
chr9:120869741|120869885 hsa-miR-1909-3p 1 0 0
chr9:120869741|120869885 hsa-miR-449c-5p 1 0 0
chr9:120869741|120869885 hsa-miR-4745-5p 1 0 0
chr9:120869741|120869885 hsa-miR-4749-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6729-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6777-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6795-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6846-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6848-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6858-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6887-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6889-5p 1 0 0
chr9:120869741|120869885 hsa-miR-4436b-3p 1 0 0
chr9:120869741|120869885 hsa-miR-6831-5p 1 0 0
chr9:120869741|120869885 hsa-miR-3199 0 1 0
chr9:120869741|120869885 hsa-miR-365a-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6511a-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6731-5p 1 0 0
chr9:120869741|120869885 hsa-miR-4700-5p 1 1 0
chr9:120869741|120869885 hsa-miR-4667-5p 1 1 0
chr9:120869741|120869885 hsa-miR-4756-5p 1 0 0
chr9:120869741|120869885 hsa-miR-4676-5p 0 1 0
chr9:120869741|120869885 hsa-miR-135a-2-3p 1 0 0
chr9:120869741|120869885 hsa-miR-2682-5p 1 0 0
chr9:120869741|120869885 hsa-miR-6824-3p 0 1 0
chr9:120869741|120869885 hsa-miR-6764-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr9:120869741|120869885
ORF Type ORF1
Protein Length 48
Nucleotide Length 144
Protein Sequence LVLPTLHLRTGCAGEPSILPSPCLSCLLQWGRPETPITESELQAEGPH
Nucleotide Sequence TTGGTTCTGCCGACGCTGCATCTTCGCACTGGCTGTGCGGGTGAGCCTTCCATCCTCCCCAGTCCCTGCCTCTCCTGCCTCCTCCAGTGGGGCAGACCAGAGACTCCCATCACAGAGTCTGAGCTCCAAGCAGAAGGGCCACAC
CircID chr9:120869741|120869885
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence MAVRVSLPSSPVPASPASSSGADQRLPSQSLSSKQKGH
Nucleotide Sequence CTGGCTGTGCGGGTGAGCCTTCCATCCTCCCCAGTCCCTGCCTCTCCTGCCTCCTCCAGTGGGGCAGACCAGAGACTCCCATCACAGAGTCTGAGCTCCAAGCAGAAGGGCCAC
CircID chr9:120869741|120869885
ORF Type ORF3
Protein Length 43
Nucleotide Length 129
Protein Sequence MELRLCDGSLWSAPLEEAGEAGTGEDGRLTRTASAKMQRRQNQ
Nucleotide Sequence TTGGAGCTCAGACTCTGTGATGGGAGTCTCTGGTCTGCCCCACTGGAGGAGGCAGGAGAGGCAGGGACTGGGGAGGATGGAAGGCTCACCCGCACAGCCAGTGCGAAGATGCAGCGTCGGCAGAACCAA
CircID chr9:120869741|120869885
ORF Type ORF4
Protein Length 37
Nucleotide Length 111
Protein Sequence MGVSGLPHWRRQERQGLGRMEGSPAQPVRRCSVGRTK
Nucleotide Sequence ATGGGAGTCTCTGGTCTGCCCCACTGGAGGAGGCAGGAGAGGCAGGGACTGGGGAGGATGGAAGGCTCACCCGCACAGCCAGTGCGAAGATGCAGCGTCGGCAGAACCAAG
CircID chr9:120869741|120869885
ORF Type ORF5
Protein Length 33
Nucleotide Length 99
Protein Sequence MVCPTGGGRRGRDWGGWKAHPHSQCEDAASAEP
Nucleotide Sequence CTGGTCTGCCCCACTGGAGGAGGCAGGAGAGGCAGGGACTGGGGAGGATGGAAGGCTCACCCGCACAGCCAGTGCGAAGATGCAGCGTCGGCAGAACCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab