CircRNA Information

General Information
circRNA Basic Information
CircID chr9:121318420|121318748
Strand -
CircType exon
Host Gene ENSG00000148180.15;
Algorism CIRI2;
Sequence ACGGAGGAGAGGAAGGCTGCCCTCAAAACAGCCTCTGACTTCATCACCAAGATGGACTACCCCAAGCAGACTCAGGTGAGTCTTGGAGGCCAGGTAGGATGGGAAGGGGTGGGTCCTGTTTGGAGGGGATGGGCTGGAGTAGGGCGGGTGTCCCACCCTCAGTGTGGATGGGGTATCTGAGGCTCCCCTGGGGACCCCTGCTGGGCAGCCCAGCCACATCCTGCTCCTCTGCCTCCCCTCCCCAGGTCTCGGTCCTTCCTGAGGGCGGTGAGACCCCACTGTTCAAGCAGTTCTTCAAGAACTGGCGGGACCCAGACCAGACAGATGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:121318420|121318748 hsa-miR-214-5p 0 0 1
chr9:121318420|121318748 hsa-miR-214-3p 0 0 1
chr9:121318420|121318748 hsa-miR-526b-5p 0 0 1
chr9:121318420|121318748 hsa-miR-526b-3p 0 0 1
chr9:121318420|121318748 hsa-miR-619-5p 0 0 1
chr9:121318420|121318748 hsa-miR-619-3p 0 0 1
chr9:121318420|121318748 hsa-miR-627-5p 0 0 1
chr9:121318420|121318748 hsa-miR-627-3p 0 0 1
chr9:121318420|121318748 hsa-miR-631 0 0 1
chr9:121318420|121318748 hsa-miR-650 0 0 1
chr9:121318420|121318748 hsa-miR-766-5p 0 0 1
chr9:121318420|121318748 hsa-miR-766-3p 0 0 1
chr9:121318420|121318748 hsa-miR-873-5p 0 0 1
chr9:121318420|121318748 hsa-miR-873-3p 0 0 1
chr9:121318420|121318748 hsa-miR-924 0 0 1
chr9:121318420|121318748 hsa-miR-939-5p 0 0 1
chr9:121318420|121318748 hsa-miR-939-3p 0 0 1
chr9:121318420|121318748 hsa-miR-1229-5p 0 0 1
chr9:121318420|121318748 hsa-miR-1229-3p 0 0 1
chr9:121318420|121318748 hsa-miR-1231 0 0 1
chr9:121318420|121318748 hsa-miR-1304-5p 0 0 1
chr9:121318420|121318748 hsa-miR-1304-3p 0 0 1
chr9:121318420|121318748 hsa-miR-1265 0 1 1
chr9:121318420|121318748 hsa-miR-1827 0 0 1
chr9:121318420|121318748 hsa-miR-769-5p 0 0 1
chr9:121318420|121318748 hsa-miR-615-5p 1 1 1
chr9:121318420|121318748 hsa-miR-485-5p 0 0 1
chr9:121318420|121318748 hsa-miR-508-5p 0 0 1
chr9:121318420|121318748 hsa-miR-1302 0 0 1
chr9:121318420|121318748 hsa-miR-551a 1 0 0
chr9:121318420|121318748 hsa-miR-663a 1 0 0
chr9:121318420|121318748 hsa-miR-658 1 0 0
chr9:121318420|121318748 hsa-miR-762 1 0 0
chr9:121318420|121318748 hsa-miR-1275 1 0 0
chr9:121318420|121318748 hsa-miR-3141 1 0 0
chr9:121318420|121318748 hsa-miR-3175 1 0 0
chr9:121318420|121318748 hsa-miR-3176 0 1 0
chr9:121318420|121318748 hsa-miR-3196 1 0 0
chr9:121318420|121318748 hsa-miR-4297 0 1 0
chr9:121318420|121318748 hsa-miR-4270 1 0 0
chr9:121318420|121318748 hsa-miR-3661 0 1 0
chr9:121318420|121318748 hsa-miR-3714 1 0 0
chr9:121318420|121318748 hsa-miR-3916 1 0 0
chr9:121318420|121318748 hsa-miR-4476 0 1 0
chr9:121318420|121318748 hsa-miR-4488 1 0 0
chr9:121318420|121318748 hsa-miR-4505 0 1 0
chr9:121318420|121318748 hsa-miR-4651 1 0 0
chr9:121318420|121318748 hsa-miR-4656 1 0 0
chr9:121318420|121318748 hsa-miR-4706 1 0 0
chr9:121318420|121318748 hsa-miR-4739 1 1 0
chr9:121318420|121318748 hsa-miR-4741 1 1 0
chr9:121318420|121318748 hsa-miR-5090 1 0 0
chr9:121318420|121318748 hsa-miR-5092 0 1 0
chr9:121318420|121318748 hsa-miR-5194 1 0 0
chr9:121318420|121318748 hsa-miR-5695 0 1 0
chr9:121318420|121318748 hsa-miR-5698 1 0 0
chr9:121318420|121318748 hsa-miR-5787 1 0 0
chr9:121318420|121318748 hsa-miR-6133 1 0 0
chr9:121318420|121318748 hsa-miR-6165 0 1 0
chr9:121318420|121318748 hsa-miR-6860 1 0 0
chr9:121318420|121318748 hsa-miR-8089 1 1 0
chr9:121318420|121318748 hsa-miR-10226 0 1 0
chr9:121318420|121318748 hsa-miR-12115 1 0 0
chr9:121318420|121318748 hsa-miR-6749-3p 1 0 0
chr9:121318420|121318748 hsa-miR-6734-5p 1 0 0
chr9:121318420|121318748 hsa-miR-4700-3p 1 1 0
chr9:121318420|121318748 hsa-miR-6765-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6861-5p 1 0 0
chr9:121318420|121318748 hsa-miR-7106-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6825-5p 1 1 0
chr9:121318420|121318748 hsa-miR-6857-5p 1 0 0
chr9:121318420|121318748 hsa-miR-4687-3p 1 1 0
chr9:121318420|121318748 hsa-miR-6799-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6510-5p 0 1 0
chr9:121318420|121318748 hsa-miR-7851-3p 0 1 0
chr9:121318420|121318748 hsa-miR-7114-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6089 1 0 0
chr9:121318420|121318748 hsa-miR-6880-5p 1 0 0
chr9:121318420|121318748 hsa-miR-4695-5p 1 0 0
chr9:121318420|121318748 hsa-miR-4474-3p 0 1 0
chr9:121318420|121318748 hsa-miR-6842-3p 0 1 0
chr9:121318420|121318748 hsa-miR-6721-5p 1 0 0
chr9:121318420|121318748 hsa-miR-3189-5p 0 1 0
chr9:121318420|121318748 hsa-miR-6849-3p 1 0 0
chr9:121318420|121318748 hsa-miR-6845-3p 0 1 0
chr9:121318420|121318748 hsa-miR-3663-5p 0 1 0
chr9:121318420|121318748 hsa-miR-877-3p 0 1 0
chr9:121318420|121318748 hsa-miR-6829-5p 0 1 0
chr9:121318420|121318748 hsa-miR-6732-5p 1 0 0
chr9:121318420|121318748 hsa-miR-2467-3p 0 1 0
chr9:121318420|121318748 hsa-miR-6782-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6810-5p 1 0 0
chr9:121318420|121318748 hsa-miR-7109-5p 1 0 0
chr9:121318420|121318748 hsa-miR-1226-5p 0 1 0
chr9:121318420|121318748 hsa-miR-7108-3p 0 1 0
chr9:121318420|121318748 hsa-miR-4764-5p 0 1 0
chr9:121318420|121318748 hsa-miR-1908-5p 1 0 0
chr9:121318420|121318748 hsa-miR-1228-5p 1 0 0
chr9:121318420|121318748 hsa-miR-3667-3p 0 1 0
chr9:121318420|121318748 hsa-miR-6771-5p 1 0 0
chr9:121318420|121318748 hsa-miR-4690-5p 1 1 0
chr9:121318420|121318748 hsa-miR-92b-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6847-5p 0 1 0
chr9:121318420|121318748 hsa-miR-4743-3p 0 1 0
chr9:121318420|121318748 hsa-miR-7111-3p 0 1 0
chr9:121318420|121318748 hsa-miR-149-3p 1 0 0
chr9:121318420|121318748 hsa-miR-6824-5p 1 0 0
chr9:121318420|121318748 hsa-miR-194-3p 0 1 0
chr9:121318420|121318748 hsa-miR-423-5p 1 0 0
chr9:121318420|121318748 hsa-miR-2115-5p 0 1 0
chr9:121318420|121318748 hsa-miR-519d-5p 0 1 0
chr9:121318420|121318748 hsa-miR-1224-3p 0 1 0
chr9:121318420|121318748 hsa-miR-1180-5p 0 1 0
chr9:121318420|121318748 hsa-miR-6816-3p 0 1 0
chr9:121318420|121318748 hsa-miR-6880-3p 0 1 0
chr9:121318420|121318748 hsa-miR-1296-3p 0 1 0
chr9:121318420|121318748 hsa-miR-3664-3p 0 1 0
chr9:121318420|121318748 hsa-miR-3157-3p 0 1 0
chr9:121318420|121318748 hsa-miR-6888-3p 0 1 0
chr9:121318420|121318748 hsa-miR-10400-5p 1 0 0
chr9:121318420|121318748 hsa-miR-1207-5p 1 0 0
chr9:121318420|121318748 hsa-miR-1233-5p 1 0 0
chr9:121318420|121318748 hsa-miR-4763-3p 1 0 0
chr9:121318420|121318748 hsa-miR-6778-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6787-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6816-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6870-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6893-5p 1 0 0
chr9:121318420|121318748 hsa-miR-1343-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6737-5p 0 1 0
chr9:121318420|121318748 hsa-miR-6743-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6754-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6756-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6803-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6819-5p 1 0 0
chr9:121318420|121318748 hsa-miR-7107-5p 1 0 0
chr9:121318420|121318748 hsa-miR-1249-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6722-3p 1 1 0
chr9:121318420|121318748 hsa-miR-6763-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6779-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6780a-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6797-5p 1 0 0
chr9:121318420|121318748 hsa-miR-7111-5p 1 0 0
chr9:121318420|121318748 hsa-miR-3127-3p 0 1 0
chr9:121318420|121318748 hsa-miR-4685-3p 1 0 0
chr9:121318420|121318748 hsa-miR-3620-5p 0 1 0
chr9:121318420|121318748 hsa-miR-4728-5p 1 1 0
chr9:121318420|121318748 hsa-miR-5196-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6780b-5p 1 0 0
chr9:121318420|121318748 hsa-miR-10396b-5p 1 0 0
chr9:121318420|121318748 hsa-miR-1237-5p 1 0 0
chr9:121318420|121318748 hsa-miR-328-5p 1 1 0
chr9:121318420|121318748 hsa-miR-4632-5p 1 0 0
chr9:121318420|121318748 hsa-miR-4649-5p 1 0 0
chr9:121318420|121318748 hsa-miR-4726-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6729-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6735-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6738-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6795-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6858-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6883-5p 1 1 0
chr9:121318420|121318748 hsa-miR-6887-5p 1 1 0
chr9:121318420|121318748 hsa-miR-6889-5p 0 1 0
chr9:121318420|121318748 hsa-miR-4723-5p 1 1 0
chr9:121318420|121318748 hsa-miR-6831-5p 0 1 0
chr9:121318420|121318748 hsa-miR-6885-5p 1 0 0
chr9:121318420|121318748 hsa-miR-1910-3p 1 1 0
chr9:121318420|121318748 hsa-miR-6511a-5p 1 1 0
chr9:121318420|121318748 hsa-miR-7843-5p 1 0 0
chr9:121318420|121318748 hsa-miR-1914-3p 1 0 0
chr9:121318420|121318748 hsa-miR-4700-5p 1 1 0
chr9:121318420|121318748 hsa-miR-4646-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6876-5p 0 1 0
chr9:121318420|121318748 hsa-miR-6766-5p 0 1 0
chr9:121318420|121318748 hsa-miR-6785-5p 1 1 0
chr9:121318420|121318748 hsa-miR-4667-5p 1 1 0
chr9:121318420|121318748 hsa-miR-3184-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6791-5p 1 0 0
chr9:121318420|121318748 hsa-miR-6756-3p 1 1 0
chr9:121318420|121318748 hsa-miR-6862-3p 1 0 0
chr9:121318420|121318748 hsa-miR-3059-5p 0 1 0
chr9:121318420|121318748 hsa-miR-6511b-3p 1 0 0
chr9:121318420|121318748 hsa-miR-6512-3p 0 1 0
chr9:121318420|121318748 hsa-miR-6823-3p 0 1 0
chr9:121318420|121318748 hsa-miR-7114-3p 1 1 0
chr9:121318420|121318748 hsa-miR-4756-5p 1 0 0
chr9:121318420|121318748 hsa-miR-4691-5p 0 1 0
chr9:121318420|121318748 hsa-miR-6764-5p 0 1 0
chr9:121318420|121318748 hsa-miR-550a-3p 0 1 0
chr9:121318420|121318748 hsa-miR-3922-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr9:121318420|121318748
ORF Type ORF1
Protein Length 42
Nucleotide Length 129
Protein Sequence MDYPKQTQVSLGGQVGWEGVGPVWRGWAGVGRVSHPQCGWGI
Nucleotide Sequence ATGGACTACCCCAAGCAGACTCAGGTGAGTCTTGGAGGCCAGGTAGGATGGGAAGGGGTGGGTCCTGTTTGGAGGGGATGGGCTGGAGTAGGGCGGGTGTCCCACCCTCAGTGTGGATGGGGTATCTGA
CircID chr9:121318420|121318748
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence MPPLPRSRSFLRAVRPHCSSSSSRTGGTQTRQM
Nucleotide Sequence CTGCCTCCCCTCCCCAGGTCTCGGTCCTTCCTGAGGGCGGTGAGACCCCACTGTTCAAGCAGTTCTTCAAGAACTGGCGGGACCCAGACCAGACAGATG
CircID chr9:121318420|121318748
ORF Type ORF3
Protein Length 77
Nucleotide Length 231
Protein Sequence MGRGGSCLEGMGWSRAGVPPSVWMGYLRLPWGPLLGSPATSCSSASPPQVSVLPEGGETPLFKQFFKNWRDPDQTDG
Nucleotide Sequence ATGGGAAGGGGTGGGTCCTGTTTGGAGGGGATGGGCTGGAGTAGGGCGGGTGTCCCACCCTCAGTGTGGATGGGGTATCTGAGGCTCCCCTGGGGACCCCTGCTGGGCAGCCCAGCCACATCCTGCTCCTCTGCCTCCCCTCCCCAGGTCTCGGTCCTTCCTGAGGGCGGTGAGACCCCACTGTTCAAGCAGTTCTTCAAGAACTGGCGGGACCCAGACCAGACAGATGGC
CircID chr9:121318420|121318748
ORF Type ORF4
Protein Length 53
Nucleotide Length 162
Protein Sequence MVWVPPVLEELLEQWGLTALRKDRDLGRGGRGAGCGWAAQQGSPGEPQIPHPH
Nucleotide Sequence CTGGTCTGGGTCCCGCCAGTTCTTGAAGAACTGCTTGAACAGTGGGGTCTCACCGCCCTCAGGAAGGACCGAGACCTGGGGAGGGGAGGCAGAGGAGCAGGATGTGGCTGGGCTGCCCAGCAGGGGTCCCCAGGGGAGCCTCAGATACCCCATCCACACTGA
CircID chr9:121318420|121318748
ORF Type ORF5
Protein Length 84
Nucleotide Length 255
Protein Sequence MKNCLNSGVSPPSGRTETWGGEAEEQDVAGLPSRGPQGSLRYPIHTEGGTPALLQPIPSKQDPPLPILPGLQDSPESAWGSPSW
Nucleotide Sequence TTGAAGAACTGCTTGAACAGTGGGGTCTCACCGCCCTCAGGAAGGACCGAGACCTGGGGAGGGGAGGCAGAGGAGCAGGATGTGGCTGGGCTGCCCAGCAGGGGTCCCCAGGGGAGCCTCAGATACCCCATCCACACTGAGGGTGGGACACCCGCCCTACTCCAGCCCATCCCCTCCAAACAGGACCCACCCCTTCCCATCCTACCTGGCCTCCAAGACTCACCTGAGTCTGCTTGGGGTAGTCCATCTTGGTGA
CircID chr9:121318420|121318748
ORF Type ORF6
Protein Length 73
Nucleotide Length 219
Protein Sequence MWLGCPAGVPRGASDTPSTLRVGHPPYSSPSPPNRTHPFPSYLASKTHLSLLGVVHLGDEVRGCFEGSLPLLR
Nucleotide Sequence ATGTGGCTGGGCTGCCCAGCAGGGGTCCCCAGGGGAGCCTCAGATACCCCATCCACACTGAGGGTGGGACACCCGCCCTACTCCAGCCCATCCCCTCCAAACAGGACCCACCCCTTCCCATCCTACCTGGCCTCCAAGACTCACCTGAGTCTGCTTGGGGTAGTCCATCTTGGTGATGAAGTCAGAGGCTGTTTTGAGGGCAGCCTTCCTCTCCTCCGT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab