CircRNA Information

General Information
circRNA Basic Information
CircID chr9:121328998|121329305
Strand -
CircType exon
Host Gene ENSG00000148180.15;
Algorism CIRI2;
Sequence AAGATTGGACGTTTTGTGGTGAGCCCCTGCGGAGGTCACACCTCTGCTTTCCCCTCGGGAGGCGAGTTCCACAGGACTGGCCGGCAGCAGGGGCAGGAGAAACAGTTCTGATGGTGTGGCACAGAGGAAGGGGCCCCCTGCCAGCTGCAGCCAGCTGTGCCACTCCCTCAGGGGGCAGATAAAGGAAGGCCACCCAGGGGAGGGAAGACATCTCACTGATGCTCTTTCGTTCCTTCCCAGATCGAAGAGGTTCCTGGTGAGCTCATGCAGGAAGACCTGGCAACGGATGACGTCATGCTTCTGGACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:121328998|121329305 hsa-miR-197-5p 0 0 1
chr9:121328998|121329305 hsa-miR-197-3p 0 0 1
chr9:121328998|121329305 hsa-miR-198 0 1 1
chr9:121328998|121329305 hsa-miR-143-5p 0 0 1
chr9:121328998|121329305 hsa-miR-143-3p 0 0 1
chr9:121328998|121329305 hsa-miR-370-5p 0 0 1
chr9:121328998|121329305 hsa-miR-370-3p 0 0 1
chr9:121328998|121329305 hsa-miR-452-5p 0 0 1
chr9:121328998|121329305 hsa-miR-452-3p 0 0 1
chr9:121328998|121329305 hsa-miR-598-5p 0 0 1
chr9:121328998|121329305 hsa-miR-598-3p 0 0 1
chr9:121328998|121329305 hsa-miR-604 0 0 1
chr9:121328998|121329305 hsa-miR-647 0 0 1
chr9:121328998|121329305 hsa-miR-1301-5p 0 0 1
chr9:121328998|121329305 hsa-miR-1301-3p 0 0 1
chr9:121328998|121329305 hsa-miR-873-5p 0 0 1
chr9:121328998|121329305 hsa-miR-873-3p 0 0 1
chr9:121328998|121329305 hsa-miR-1226-5p 0 0 1
chr9:121328998|121329305 hsa-miR-1226-3p 0 0 1
chr9:121328998|121329305 hsa-miR-1227-5p 0 0 1
chr9:121328998|121329305 hsa-miR-1227-3p 0 0 1
chr9:121328998|121329305 hsa-miR-1202 0 0 1
chr9:121328998|121329305 hsa-miR-1293 0 0 1
chr9:121328998|121329305 hsa-miR-1276 0 0 1
chr9:121328998|121329305 hsa-miR-1281 0 0 1
chr9:121328998|121329305 hsa-miR-1252-5p 0 0 1
chr9:121328998|121329305 hsa-miR-1252-3p 0 0 1
chr9:121328998|121329305 hsa-miR-296-5p 1 1 1
chr9:121328998|121329305 hsa-miR-1184 0 0 1
chr9:121328998|121329305 hsa-miR-1207-3p 0 0 1
chr9:121328998|121329305 hsa-miR-331-3p 0 1 1
chr9:121328998|121329305 hsa-miR-556-5p 0 0 1
chr9:121328998|121329305 hsa-miR-1207-5p 0 0 1
chr9:121328998|121329305 hsa-miR-324-3p 0 0 1
chr9:121328998|121329305 hsa-miR-125a-5p 0 0 1
chr9:121328998|121329305 hsa-miR-220b 0 0 1
chr9:121328998|121329305 hsa-miR-125b 0 0 1
chr9:121328998|121329305 hsa-miR-642 0 0 1
chr9:121328998|121329305 hsa-miR-632 0 1 0
chr9:121328998|121329305 hsa-miR-298 1 0 0
chr9:121328998|121329305 hsa-miR-663b 1 0 0
chr9:121328998|121329305 hsa-miR-1248 0 1 0
chr9:121328998|121329305 hsa-miR-1913 0 1 0
chr9:121328998|121329305 hsa-miR-1976 0 1 0
chr9:121328998|121329305 hsa-miR-2278 0 1 0
chr9:121328998|121329305 hsa-miR-544b 0 1 0
chr9:121328998|121329305 hsa-miR-3153 0 1 0
chr9:121328998|121329305 hsa-miR-4297 0 1 0
chr9:121328998|121329305 hsa-miR-4314 0 1 0
chr9:121328998|121329305 hsa-miR-4257 0 1 0
chr9:121328998|121329305 hsa-miR-4292 0 1 0
chr9:121328998|121329305 hsa-miR-1268b 1 0 0
chr9:121328998|121329305 hsa-miR-4437 0 1 0
chr9:121328998|121329305 hsa-miR-4510 0 1 0
chr9:121328998|121329305 hsa-miR-4511 0 1 0
chr9:121328998|121329305 hsa-miR-3960 1 0 0
chr9:121328998|121329305 hsa-miR-4682 1 0 0
chr9:121328998|121329305 hsa-miR-4739 1 0 0
chr9:121328998|121329305 hsa-miR-5094 0 1 0
chr9:121328998|121329305 hsa-miR-5787 1 0 0
chr9:121328998|121329305 hsa-miR-6071 0 1 0
chr9:121328998|121329305 hsa-miR-6127 0 1 0
chr9:121328998|121329305 hsa-miR-6129 0 1 0
chr9:121328998|121329305 hsa-miR-6130 0 1 0
chr9:121328998|121329305 hsa-miR-7150 0 1 0
chr9:121328998|121329305 hsa-miR-12119 0 1 0
chr9:121328998|121329305 hsa-miR-12120 0 1 0
chr9:121328998|121329305 hsa-miR-6749-3p 0 1 0
chr9:121328998|121329305 hsa-miR-6734-5p 0 1 0
chr9:121328998|121329305 hsa-miR-1225-3p 1 0 0
chr9:121328998|121329305 hsa-miR-3064-5p 0 1 0
chr9:121328998|121329305 hsa-miR-6875-3p 0 1 0
chr9:121328998|121329305 hsa-miR-6762-3p 1 0 0
chr9:121328998|121329305 hsa-miR-185-3p 1 0 0
chr9:121328998|121329305 hsa-miR-6732-5p 1 1 0
chr9:121328998|121329305 hsa-miR-6514-5p 1 0 0
chr9:121328998|121329305 hsa-miR-6740-3p 0 1 0
chr9:121328998|121329305 hsa-miR-939-3p 1 0 0
chr9:121328998|121329305 hsa-miR-5088-5p 1 0 0
chr9:121328998|121329305 hsa-miR-6772-3p 0 1 0
chr9:121328998|121329305 hsa-miR-204-3p 0 1 0
chr9:121328998|121329305 hsa-miR-3667-3p 0 1 0
chr9:121328998|121329305 hsa-miR-3202 0 1 0
chr9:121328998|121329305 hsa-miR-6834-5p 0 1 0
chr9:121328998|121329305 hsa-miR-6501-5p 0 1 0
chr9:121328998|121329305 hsa-miR-4787-5p 1 0 0
chr9:121328998|121329305 hsa-miR-6742-3p 0 1 0
chr9:121328998|121329305 hsa-miR-4757-3p 0 1 0
chr9:121328998|121329305 hsa-miR-4715-5p 0 1 0
chr9:121328998|121329305 hsa-miR-1910-5p 0 1 0
chr9:121328998|121329305 hsa-miR-6782-3p 1 0 0
chr9:121328998|121329305 hsa-miR-3074-5p 0 1 0
chr9:121328998|121329305 hsa-miR-891a-3p 0 1 0
chr9:121328998|121329305 hsa-miR-3670 0 1 0
chr9:121328998|121329305 hsa-miR-6808-3p 0 1 0
chr9:121328998|121329305 hsa-miR-10400-5p 1 0 0
chr9:121328998|121329305 hsa-miR-4763-3p 0 1 0
chr9:121328998|121329305 hsa-miR-6737-5p 1 0 0
chr9:121328998|121329305 hsa-miR-6752-5p 1 0 0
chr9:121328998|121329305 hsa-miR-6756-5p 1 0 0
chr9:121328998|121329305 hsa-miR-6851-5p 1 0 0
chr9:121328998|121329305 hsa-miR-7107-5p 1 0 0
chr9:121328998|121329305 hsa-miR-6722-3p 0 1 0
chr9:121328998|121329305 hsa-miR-3127-3p 1 1 0
chr9:121328998|121329305 hsa-miR-4685-3p 1 0 0
chr9:121328998|121329305 hsa-miR-4728-5p 0 1 0
chr9:121328998|121329305 hsa-miR-5196-5p 0 1 0
chr9:121328998|121329305 hsa-miR-6780b-5p 0 1 0
chr9:121328998|121329305 hsa-miR-1909-3p 0 1 0
chr9:121328998|121329305 hsa-miR-4646-5p 0 1 0
chr9:121328998|121329305 hsa-miR-4667-5p 0 1 0
chr9:121328998|121329305 hsa-miR-3689d 0 1 0
chr9:121328998|121329305 hsa-miR-6791-5p 0 1 0
chr9:121328998|121329305 hsa-miR-6893-3p 0 1 0
chr9:121328998|121329305 hsa-miR-6756-3p 1 1 0
chr9:121328998|121329305 hsa-miR-6810-3p 0 1 0
chr9:121328998|121329305 hsa-miR-6775-3p 1 0 0
chr9:121328998|121329305 hsa-miR-3059-5p 0 1 0
chr9:121328998|121329305 hsa-miR-6511b-3p 0 1 0
chr9:121328998|121329305 hsa-miR-3085-3p 1 1 0
chr9:121328998|121329305 hsa-miR-5581-5p 0 1 0
chr9:121328998|121329305 hsa-miR-6744-3p 1 0 0
chr9:121328998|121329305 hsa-miR-6504-5p 0 1 0
chr9:121328998|121329305 hsa-miR-6737-3p 1 0 0
chr9:121328998|121329305 hsa-miR-4676-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr9:121328998|121329305
ORF Type ORF1
Protein Length 88
Nucleotide Length 264
Protein Sequence MLSPREASSTGLAGSRGRRNSSDGVAQRKGPPASCSQLCHSLRGQIKEGHPGEGRHLTDALSFLPRSKRFLVSSCRKTWQRMTSCFWT
Nucleotide Sequence CTGCTTTCCCCTCGGGAGGCGAGTTCCACAGGACTGGCCGGCAGCAGGGGCAGGAGAAACAGTTCTGATGGTGTGGCACAGAGGAAGGGGCCCCCTGCCAGCTGCAGCCAGCTGTGCCACTCCCTCAGGGGGCAGATAAAGGAAGGCCACCCAGGGGAGGGAAGACATCTCACTGATGCTCTTTCGTTCCTTCCCAGATCGAAGAGGTTCCTGGTGAGCTCATGCAGGAAGACCTGGCAACGGATGACGTCATGCTTCTGGACA

CircID chr9:121328998|121329305
ORF Type ORF2
Protein Length 51
Nucleotide Length 156
Protein Sequence MRRSHLCFPLGRRVPQDWPAAGAGETVLMVWHRGRGPLPAAASCATPSGGR
Nucleotide Sequence CTGCGGAGGTCACACCTCTGCTTTCCCCTCGGGAGGCGAGTTCCACAGGACTGGCCGGCAGCAGGGGCAGGAGAAACAGTTCTGATGGTGTGGCACAGAGGAAGGGGCCCCCTGCCAGCTGCAGCCAGCTGTGCCACTCCCTCAGGGGGCAGATAA

CircID chr9:121328998|121329305
ORF Type ORF3
Protein Length 27
Nucleotide Length 84
Protein Sequence MTSSVARSSCMSSPGTSSIWEGTKEHQ
Nucleotide Sequence ATGACGTCATCCGTTGCCAGGTCTTCCTGCATGAGCTCACCAGGAACCTCTTCGATCTGGGAAGGAACGAAAGAGCATCAGTGA

CircID chr9:121328998|121329305
ORF Type ORF4
Protein Length 70
Nucleotide Length 210
Protein Sequence MSSLPWVAFLYLPPEGVAQLAAAGRGPLPLCHTIRTVSPAPAAGQSCGTRLPRGKQRCDLRRGSPQNVQS
Nucleotide Sequence ATGTCTTCCCTCCCCTGGGTGGCCTTCCTTTATCTGCCCCCTGAGGGAGTGGCACAGCTGGCTGCAGCTGGCAGGGGGCCCCTTCCTCTGTGCCACACCATCAGAACTGTTTCTCCTGCCCCTGCTGCCGGCCAGTCCTGTGGAACTCGCCTCCCGAGGGGAAAGCAGAGGTGTGACCTCCGCAGGGGCTCACCACAAAACGTCCAATCT

CircID chr9:121328998|121329305
ORF Type ORF5
Protein Length 90
Nucleotide Length 270
Protein Sequence MHELTRNLFDLGRNERASVRCLPSPGWPSFICPLREWHSWLQLAGGPFLCATPSELFLLPLLPASPVELASRGESRGVTSAGAHHKTSNL
Nucleotide Sequence CTGCATGAGCTCACCAGGAACCTCTTCGATCTGGGAAGGAACGAAAGAGCATCAGTGAGATGTCTTCCCTCCCCTGGGTGGCCTTCCTTTATCTGCCCCCTGAGGGAGTGGCACAGCTGGCTGCAGCTGGCAGGGGGCCCCTTCCTCTGTGCCACACCATCAGAACTGTTTCTCCTGCCCCTGCTGCCGGCCAGTCCTGTGGAACTCGCCTCCCGAGGGGAAAGCAGAGGTGTGACCTCCGCAGGGGCTCACCACAAAACGTCCAATCTT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites