CircRNA Information

General Information
circRNA Basic Information
CircID chr9:128125376|128125473
Strand -
CircType exon
Host Gene ENSG00000148334.13;
Algorism CIRI2;
Sequence CTTGCTGCAGAAGGGACACGTCTTGTACTGGTACAGGGTCAGCTGCAGGCGGCTGGACAGGGAGAGCTGCGGGCAGCAGACGGAAAAGGCTTCTAGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:128125376|128125473 hsa-miR-107 0 0 1
chr9:128125376|128125473 hsa-miR-198 0 0 1
chr9:128125376|128125473 hsa-miR-10a-5p 0 0 1
chr9:128125376|128125473 hsa-miR-10a-3p 0 0 1
chr9:128125376|128125473 hsa-miR-10b-5p 0 0 1
chr9:128125376|128125473 hsa-miR-10b-3p 0 0 1
chr9:128125376|128125473 hsa-miR-504-5p 0 0 1
chr9:128125376|128125473 hsa-miR-504-3p 0 0 1
chr9:128125376|128125473 hsa-miR-1301-5p 0 0 1
chr9:128125376|128125473 hsa-miR-1301-3p 0 0 1
chr9:128125376|128125473 hsa-miR-1237-5p 0 0 1
chr9:128125376|128125473 hsa-miR-1237-3p 0 0 1
chr9:128125376|128125473 hsa-miR-1205 0 0 1
chr9:128125376|128125473 hsa-miR-486-5p 0 0 1
chr9:128125376|128125473 hsa-miR-770-5p 0 1 1
chr9:128125376|128125473 hsa-miR-339-5p 0 1 1
chr9:128125376|128125473 hsa-miR-1184 0 1 1
chr9:128125376|128125473 hsa-miR-1274a 0 0 1
chr9:128125376|128125473 hsa-miR-103 0 0 1
chr9:128125376|128125473 hsa-miR-1274b 0 0 1
chr9:128125376|128125473 hsa-miR-544 0 0 1
chr9:128125376|128125473 hsa-miR-346 1 0 0
chr9:128125376|128125473 hsa-miR-5047 0 1 0
chr9:128125376|128125473 hsa-miR-6071 0 1 0
chr9:128125376|128125473 hsa-miR-6720-5p 0 1 0
chr9:128125376|128125473 hsa-miR-6774-3p 0 1 0
chr9:128125376|128125473 hsa-miR-6882-3p 1 0 0
chr9:128125376|128125473 hsa-miR-7113-3p 1 1 0
chr9:128125376|128125473 hsa-miR-4446-5p 0 1 0
chr9:128125376|128125473 hsa-miR-7843-3p 0 1 0
chr9:128125376|128125473 hsa-miR-6811-3p 1 0 0
chr9:128125376|128125473 hsa-miR-6867-3p 0 1 0
chr9:128125376|128125473 hsa-miR-6746-3p 0 1 0
chr9:128125376|128125473 hsa-miR-6748-3p 0 1 0
chr9:128125376|128125473 hsa-miR-624-5p 1 0 0
chr9:128125376|128125473 hsa-miR-7107-3p 1 0 0
chr9:128125376|128125473 hsa-miR-6893-3p 1 0 0
chr9:128125376|128125473 hsa-miR-4712-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr9:128125376|128125473
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence LLQKGHVLYWYRVSCRRLDRESCGQQTEKASR
Nucleotide Sequence TTGCTGCAGAAGGGACACGTCTTGTACTGGTACAGGGTCAGCTGCAGGCGGCTGGACAGGGAGAGCTGCGGGCAGCAGACGGAAAAGGCTTCTAGA

CircID chr9:128125376|128125473
ORF Type ORF2
Protein Length 26
Nucleotide Length 78
Protein Sequence MLPAALPVQPPAADPVPVQDVSLLQQ
Nucleotide Sequence CTGCTGCCCGCAGCTCTCCCTGTCCAGCCGCCTGCAGCTGACCCTGTACCAGTACAAGACGTGTCCCTTCTGCAGCAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites