CircRNA Information

General Information
circRNA Basic Information
CircID chr9:128166759|128167141
Strand -
CircType exon
Host Gene ENSG00000148337.18;
Algorism CIRI2;
Sequence CTGCAGGTTCTCAAAGTGGCCCAGGGACTTGCAGTGGGAGAGCTGTGCCCCTGAGTTGCTGTGATAGAACTTGTGGCAGATGCGGCAGATATAGCCCATCACGGGCACCAGGAAGTCCACACCTGTAGGATGGGATGGCAGGGTCTGCACTCACATCCCTGTACCAGCGAGGTGTCCCTCCCTCTCTAGGGGCCCATGTGCTCCCCAACCCTCTAGGCAGGGGCAGAAGAGAAGGCTTCCCAGCCAGAATGCCATGGCTGGGATATGGGAGGGTCATGTGGAGGCTGGGCCCAAGGGCTGAAGCTCCTGCAGGTGGGCTCAGAGCTGGGGCCTTACCATATGCAGTATTGGGGCTGTAGGTCTCCGAGCCCTTCCACTCCTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:128166759|128167141 hsa-miR-217-5p 0 0 1
chr9:128166759|128167141 hsa-miR-217-3p 0 0 1
chr9:128166759|128167141 hsa-miR-200b-5p 0 0 1
chr9:128166759|128167141 hsa-miR-200b-3p 0 0 1
chr9:128166759|128167141 hsa-miR-146a-5p 0 0 1
chr9:128166759|128167141 hsa-miR-146a-3p 0 0 1
chr9:128166759|128167141 hsa-miR-149-5p 0 0 1
chr9:128166759|128167141 hsa-miR-149-3p 0 0 1
chr9:128166759|128167141 hsa-miR-150-5p 0 0 1
chr9:128166759|128167141 hsa-miR-150-3p 0 0 1
chr9:128166759|128167141 hsa-miR-200c-5p 0 0 1
chr9:128166759|128167141 hsa-miR-200c-3p 0 0 1
chr9:128166759|128167141 hsa-miR-448 0 1 1
chr9:128166759|128167141 hsa-miR-429 0 1 1
chr9:128166759|128167141 hsa-miR-504-5p 0 0 1
chr9:128166759|128167141 hsa-miR-504-3p 0 0 1
chr9:128166759|128167141 hsa-miR-510-5p 0 0 1
chr9:128166759|128167141 hsa-miR-510-3p 0 0 1
chr9:128166759|128167141 hsa-miR-552-5p 0 0 1
chr9:128166759|128167141 hsa-miR-552-3p 0 0 1
chr9:128166759|128167141 hsa-miR-580-5p 0 0 1
chr9:128166759|128167141 hsa-miR-580-3p 0 0 1
chr9:128166759|128167141 hsa-miR-589-5p 0 0 1
chr9:128166759|128167141 hsa-miR-589-3p 0 0 1
chr9:128166759|128167141 hsa-miR-617 0 0 1
chr9:128166759|128167141 hsa-miR-635 0 0 1
chr9:128166759|128167141 hsa-miR-708-5p 0 0 1
chr9:128166759|128167141 hsa-miR-708-3p 0 0 1
chr9:128166759|128167141 hsa-miR-939-5p 0 0 1
chr9:128166759|128167141 hsa-miR-939-3p 0 0 1
chr9:128166759|128167141 hsa-miR-942-5p 0 0 1
chr9:128166759|128167141 hsa-miR-942-3p 0 0 1
chr9:128166759|128167141 hsa-miR-1236-5p 0 0 1
chr9:128166759|128167141 hsa-miR-1236-3p 0 0 1
chr9:128166759|128167141 hsa-miR-1205 0 1 1
chr9:128166759|128167141 hsa-miR-1286 0 0 1
chr9:128166759|128167141 hsa-miR-1256 0 0 1
chr9:128166759|128167141 hsa-miR-1266-5p 0 0 1
chr9:128166759|128167141 hsa-miR-1266-3p 0 0 1
chr9:128166759|128167141 hsa-miR-1321 0 0 1
chr9:128166759|128167141 hsa-miR-671-5p 0 0 1
chr9:128166759|128167141 hsa-miR-1225-3p 0 0 1
chr9:128166759|128167141 hsa-miR-769-5p 0 0 1
chr9:128166759|128167141 hsa-miR-296-5p 0 0 1
chr9:128166759|128167141 hsa-miR-532-3p 0 0 1
chr9:128166759|128167141 hsa-miR-296-3p 0 1 1
chr9:128166759|128167141 hsa-miR-1224-3p 0 0 1
chr9:128166759|128167141 hsa-miR-28-5p 0 1 1
chr9:128166759|128167141 hsa-miR-324-3p 0 1 1
chr9:128166759|128167141 hsa-miR-146b-5p 0 0 1
chr9:128166759|128167141 hsa-miR-509-3-5p 0 0 1
chr9:128166759|128167141 hsa-miR-509-5p 0 0 1
chr9:128166759|128167141 hsa-miR-1233 0 0 1
chr9:128166759|128167141 hsa-miR-1300 0 0 1
chr9:128166759|128167141 hsa-miR-129-3p 0 0 1
chr9:128166759|128167141 hsa-miR-720 0 0 1
chr9:128166759|128167141 hsa-miR-326 0 1 0
chr9:128166759|128167141 hsa-miR-346 1 0 0
chr9:128166759|128167141 hsa-miR-608 1 0 0
chr9:128166759|128167141 hsa-miR-4277 0 1 0
chr9:128166759|128167141 hsa-miR-4292 0 1 0
chr9:128166759|128167141 hsa-miR-3911 0 1 0
chr9:128166759|128167141 hsa-miR-3921 0 1 0
chr9:128166759|128167141 hsa-miR-4515 1 0 0
chr9:128166759|128167141 hsa-miR-4518 0 1 0
chr9:128166759|128167141 hsa-miR-4658 0 1 0
chr9:128166759|128167141 hsa-miR-4674 1 0 0
chr9:128166759|128167141 hsa-miR-4739 1 0 0
chr9:128166759|128167141 hsa-miR-4767 1 0 0
chr9:128166759|128167141 hsa-miR-7977 0 1 0
chr9:128166759|128167141 hsa-miR-12115 1 0 0
chr9:128166759|128167141 hsa-miR-370-3p 1 0 0
chr9:128166759|128167141 hsa-miR-4433b-3p 1 1 0
chr9:128166759|128167141 hsa-miR-4747-3p 1 0 0
chr9:128166759|128167141 hsa-miR-1273h-3p 0 1 0
chr9:128166759|128167141 hsa-miR-4433a-3p 1 0 0
chr9:128166759|128167141 hsa-miR-6720-5p 1 0 0
chr9:128166759|128167141 hsa-miR-210-5p 0 1 0
chr9:128166759|128167141 hsa-miR-125a-3p 1 0 0
chr9:128166759|128167141 hsa-miR-3934-5p 1 1 0
chr9:128166759|128167141 hsa-miR-6515-5p 0 1 0
chr9:128166759|128167141 hsa-miR-6757-5p 0 1 0
chr9:128166759|128167141 hsa-miR-3189-5p 1 0 0
chr9:128166759|128167141 hsa-miR-148a-5p 0 1 0
chr9:128166759|128167141 hsa-miR-6849-3p 0 1 0
chr9:128166759|128167141 hsa-miR-3180-3p 1 0 0
chr9:128166759|128167141 hsa-miR-4725-5p 0 1 0
chr9:128166759|128167141 hsa-miR-6798-5p 1 0 0
chr9:128166759|128167141 hsa-miR-486-3p 1 0 0
chr9:128166759|128167141 hsa-miR-6782-5p 1 1 0
chr9:128166759|128167141 hsa-miR-7855-5p 1 1 0
chr9:128166759|128167141 hsa-miR-4713-5p 0 1 0
chr9:128166759|128167141 hsa-miR-3934-3p 0 1 0
chr9:128166759|128167141 hsa-miR-5088-5p 0 1 0
chr9:128166759|128167141 hsa-miR-7109-5p 1 0 0
chr9:128166759|128167141 hsa-miR-5001-3p 0 1 0
chr9:128166759|128167141 hsa-miR-4717-3p 0 1 0
chr9:128166759|128167141 hsa-miR-3202 0 1 0
chr9:128166759|128167141 hsa-miR-6809-3p 0 1 0
chr9:128166759|128167141 hsa-miR-6824-5p 1 0 0
chr9:128166759|128167141 hsa-miR-7843-3p 0 1 0
chr9:128166759|128167141 hsa-miR-2276-3p 0 1 0
chr9:128166759|128167141 hsa-miR-7160-3p 0 1 0
chr9:128166759|128167141 hsa-miR-629-3p 0 1 0
chr9:128166759|128167141 hsa-miR-6752-3p 0 1 0
chr9:128166759|128167141 hsa-miR-1296-5p 1 1 0
chr9:128166759|128167141 hsa-miR-4746-5p 1 0 0
chr9:128166759|128167141 hsa-miR-6880-3p 0 1 0
chr9:128166759|128167141 hsa-miR-5589-3p 0 1 0
chr9:128166759|128167141 hsa-miR-4727-5p 0 1 0
chr9:128166759|128167141 hsa-miR-3156-3p 0 1 0
chr9:128166759|128167141 hsa-miR-6816-5p 1 0 0
chr9:128166759|128167141 hsa-miR-1343-5p 1 1 0
chr9:128166759|128167141 hsa-miR-6737-5p 1 0 0
chr9:128166759|128167141 hsa-miR-6743-5p 1 0 0
chr9:128166759|128167141 hsa-miR-6819-5p 1 0 0
chr9:128166759|128167141 hsa-miR-1249-5p 1 0 0
chr9:128166759|128167141 hsa-miR-6722-3p 1 0 0
chr9:128166759|128167141 hsa-miR-6763-5p 1 1 0
chr9:128166759|128167141 hsa-miR-6774-5p 0 1 0
chr9:128166759|128167141 hsa-miR-6780a-5p 1 0 0
chr9:128166759|128167141 hsa-miR-6797-5p 1 1 0
chr9:128166759|128167141 hsa-miR-320a-5p 0 1 0
chr9:128166759|128167141 hsa-miR-4728-5p 1 0 0
chr9:128166759|128167141 hsa-miR-10396b-5p 1 0 0
chr9:128166759|128167141 hsa-miR-328-5p 1 0 0
chr9:128166759|128167141 hsa-miR-4745-5p 1 0 0
chr9:128166759|128167141 hsa-miR-6738-5p 1 1 0
chr9:128166759|128167141 hsa-miR-675-5p 1 0 0
chr9:128166759|128167141 hsa-miR-6883-5p 1 0 0
chr9:128166759|128167141 hsa-miR-6758-5p 0 1 0
chr9:128166759|128167141 hsa-miR-6773-5p 0 1 0
chr9:128166759|128167141 hsa-miR-6785-5p 0 1 0
chr9:128166759|128167141 hsa-miR-6724-5p 0 1 0
chr9:128166759|128167141 hsa-miR-4722-3p 1 1 0
chr9:128166759|128167141 hsa-miR-6727-3p 0 1 0
chr9:128166759|128167141 hsa-miR-10392-3p 1 0 0
chr9:128166759|128167141 hsa-miR-4756-5p 0 1 0
chr9:128166759|128167141 hsa-miR-10394-5p 0 1 0
chr9:128166759|128167141 hsa-miR-6797-3p 0 1 0
chr9:128166759|128167141 hsa-miR-4769-3p 0 1 0
chr9:128166759|128167141 hsa-miR-148b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr9:128166759|128167141
ORF Type ORF1
Protein Length 39
Nucleotide Length 117
Protein Sequence MGGSCGGWAQGLKLLQVGSELGPYHMQYWGCRSPSPSTP
Nucleotide Sequence ATGGGAGGGTCATGTGGAGGCTGGGCCCAAGGGCTGAAGCTCCTGCAGGTGGGCTCAGAGCTGGGGCCTTACCATATGCAGTATTGGGGCTGTAGGTCTCCGAGCCCTTCCACTCCT
CircID chr9:128166759|128167141
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MSCCDRTCGRCGRYSPSRAPGSPHL
Nucleotide Sequence CTGAGTTGCTGTGATAGAACTTGTGGCAGATGCGGCAGATATAGCCCATCACGGGCACCAGGAAGTCCACACCTGTAG
CircID chr9:128166759|128167141
ORF Type ORF3
Protein Length 74
Nucleotide Length 225
Protein Sequence MAGSALTSLYQRGVPPSLGAHVLPNPLGRGRREGFPARMPWLGYGRVMWRLGPRAEAPAGGLRAGALPYAVLGL
Nucleotide Sequence ATGGCAGGGTCTGCACTCACATCCCTGTACCAGCGAGGTGTCCCTCCCTCTCTAGGGGCCCATGTGCTCCCCAACCCTCTAGGCAGGGGCAGAAGAGAAGGCTTCCCAGCCAGAATGCCATGGCTGGGATATGGGAGGGTCATGTGGAGGCTGGGCCCAAGGGCTGAAGCTCCTGCAGGTGGGCTCAGAGCTGGGGCCTTACCATATGCAGTATTGGGGCTGTAG
CircID chr9:128166759|128167141
ORF Type ORF4
Protein Length 103
Nucleotide Length 312
Protein Sequence MSPPAGASALGPSLHMTLPYPSHGILAGKPSLLPLPRGLGSTWAPREGGTPRWYRDVSADPAIPSYRCGLPGARDGLYLPHLPQVLSQQLRGTALPLQVPGPL
Nucleotide Sequence CTGAGCCCACCTGCAGGAGCTTCAGCCCTTGGGCCCAGCCTCCACATGACCCTCCCATATCCCAGCCATGGCATTCTGGCTGGGAAGCCTTCTCTTCTGCCCCTGCCTAGAGGGTTGGGGAGCACATGGGCCCCTAGAGAGGGAGGGACACCTCGCTGGTACAGGGATGTGAGTGCAGACCCTGCCATCCCATCCTACAGGTGTGGACTTCCTGGTGCCCGTGATGGGCTATATCTGCCGCATCTGCCACAAGTTCTATCACAGCAACTCAGGGGCACAGCTCTCCCACTGCAAGTCCCTGGGCCACTTTGA
CircID chr9:128166759|128167141
ORF Type ORF5
Protein Length 34
Nucleotide Length 105
Protein Sequence MAFWLGSLLFCPCLEGWGAHGPLEREGHLAGTGM
Nucleotide Sequence ATGGCATTCTGGCTGGGAAGCCTTCTCTTCTGCCCCTGCCTAGAGGGTTGGGGAGCACATGGGCCCCTAGAGAGGGAGGGACACCTCGCTGGTACAGGGATGTGA
CircID chr9:128166759|128167141
ORF Type ORF6
Protein Length 47
Nucleotide Length 141
Protein Sequence MPSHPTGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQ
Nucleotide Sequence CTGCCATCCCATCCTACAGGTGTGGACTTCCTGGTGCCCGTGATGGGCTATATCTGCCGCATCTGCCACAAGTTCTATCACAGCAACTCAGGGGCACAGCTCTCCCACTGCAAGTCCCTGGGCCACTTTGAGAACCTGCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab