CircRNA Information

General Information
circRNA Basic Information
CircID chr9:128178851|128179198
Strand -
CircType exon
Host Gene ENSG00000148337.18;
Algorism CIRI2;
Sequence CTGCGCTGGAGGATGCTCCTGTGGCTGGACGCTTGGCTGTGCCTGTGTGTGGACCTGTGGATATGTCTGTGTCTGGACCTGCTTCTGCAGCTGCAGCTGCACCTGCCTTGGGGGCTGTGAATGTGCCTGGGGCTGCACCTGTGGCTGCACCTGCTTCAGCGGCTCTGCCTCCTGCTGCAGCTGCACCTGCCTTGGGCCCTGTGAATGTGCCTGTGGCTGTACCTGTGGCTGCACCTGCTTCTGTGGCTCTGCCTCCTGCTGCAGCTGTGGCTGCACCTGCTTCTGTTGCAGCACTAAGTGCTCTGGAGAGGTCTGTGTTTGCGCCTGCTTCTGCAGCTTTGGCTGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:128178851|128179198 hsa-miR-27a-5p 0 0 1
chr9:128178851|128179198 hsa-miR-27a-3p 0 0 1
chr9:128178851|128179198 hsa-miR-107 0 0 1
chr9:128178851|128179198 hsa-miR-198 0 1 1
chr9:128178851|128179198 hsa-miR-181c-5p 0 0 1
chr9:128178851|128179198 hsa-miR-181c-3p 0 0 1
chr9:128178851|128179198 hsa-miR-214-5p 0 0 1
chr9:128178851|128179198 hsa-miR-214-3p 0 0 1
chr9:128178851|128179198 hsa-miR-27b-5p 0 0 1
chr9:128178851|128179198 hsa-miR-27b-3p 0 0 1
chr9:128178851|128179198 hsa-miR-320a-5p 0 0 1
chr9:128178851|128179198 hsa-miR-320a-3p 0 0 1
chr9:128178851|128179198 hsa-miR-181d-5p 0 0 1
chr9:128178851|128179198 hsa-miR-181d-3p 0 0 1
chr9:128178851|128179198 hsa-miR-520f-5p 0 0 1
chr9:128178851|128179198 hsa-miR-520f-3p 0 0 1
chr9:128178851|128179198 hsa-miR-552-5p 0 0 1
chr9:128178851|128179198 hsa-miR-552-3p 0 0 1
chr9:128178851|128179198 hsa-miR-650 1 1 1
chr9:128178851|128179198 hsa-miR-1301-5p 0 0 1
chr9:128178851|128179198 hsa-miR-1301-3p 0 0 1
chr9:128178851|128179198 hsa-miR-766-5p 0 0 1
chr9:128178851|128179198 hsa-miR-766-3p 0 0 1
chr9:128178851|128179198 hsa-miR-298 1 1 1
chr9:128178851|128179198 hsa-miR-940 1 1 1
chr9:128178851|128179198 hsa-miR-1827 0 0 1
chr9:128178851|128179198 hsa-miR-512-3p 0 1 1
chr9:128178851|128179198 hsa-miR-1184 0 1 1
chr9:128178851|128179198 hsa-miR-525-5p 0 0 1
chr9:128178851|128179198 hsa-miR-513a-5p 0 0 1
chr9:128178851|128179198 hsa-miR-520a-5p 0 0 1
chr9:128178851|128179198 hsa-miR-320b 0 0 1
chr9:128178851|128179198 hsa-miR-320c 0 0 1
chr9:128178851|128179198 hsa-miR-320d 0 0 1
chr9:128178851|128179198 hsa-miR-103 0 0 1
chr9:128178851|128179198 hsa-miR-220c 0 0 1
chr9:128178851|128179198 hsa-miR-181a 0 0 1
chr9:128178851|128179198 hsa-miR-181b 0 0 1
chr9:128178851|128179198 hsa-miR-602 1 1 0
chr9:128178851|128179198 hsa-miR-657 1 0 0
chr9:128178851|128179198 hsa-miR-761 0 1 0
chr9:128178851|128179198 hsa-miR-764 0 1 0
chr9:128178851|128179198 hsa-miR-665 1 1 0
chr9:128178851|128179198 hsa-miR-1203 1 0 0
chr9:128178851|128179198 hsa-miR-548v 0 1 0
chr9:128178851|128179198 hsa-miR-4269 1 1 0
chr9:128178851|128179198 hsa-miR-3612 0 1 0
chr9:128178851|128179198 hsa-miR-3621 1 0 0
chr9:128178851|128179198 hsa-miR-3665 1 1 0
chr9:128178851|128179198 hsa-miR-3714 0 1 0
chr9:128178851|128179198 hsa-miR-3918 0 1 0
chr9:128178851|128179198 hsa-miR-3937 1 0 0
chr9:128178851|128179198 hsa-miR-3943 0 1 0
chr9:128178851|128179198 hsa-miR-3135b 1 1 0
chr9:128178851|128179198 hsa-miR-3960 1 0 0
chr9:128178851|128179198 hsa-miR-4656 1 0 0
chr9:128178851|128179198 hsa-miR-4736 0 1 0
chr9:128178851|128179198 hsa-miR-5047 0 1 0
chr9:128178851|128179198 hsa-miR-5090 1 0 0
chr9:128178851|128179198 hsa-miR-6081 1 1 0
chr9:128178851|128179198 hsa-miR-6125 1 0 0
chr9:128178851|128179198 hsa-miR-6165 0 1 0
chr9:128178851|128179198 hsa-miR-8485 0 1 0
chr9:128178851|128179198 hsa-miR-9900 0 1 0
chr9:128178851|128179198 hsa-miR-12122 0 1 0
chr9:128178851|128179198 hsa-miR-17-3p 0 1 0
chr9:128178851|128179198 hsa-miR-6765-5p 1 0 0
chr9:128178851|128179198 hsa-miR-6720-5p 0 1 0
chr9:128178851|128179198 hsa-miR-6510-5p 0 1 0
chr9:128178851|128179198 hsa-miR-3934-5p 0 1 0
chr9:128178851|128179198 hsa-miR-6089 1 0 0
chr9:128178851|128179198 hsa-miR-4695-5p 1 1 0
chr9:128178851|128179198 hsa-miR-4722-5p 1 1 0
chr9:128178851|128179198 hsa-miR-3189-5p 1 0 0
chr9:128178851|128179198 hsa-miR-6768-5p 0 1 0
chr9:128178851|128179198 hsa-miR-6805-5p 1 0 0
chr9:128178851|128179198 hsa-miR-6798-5p 1 0 0
chr9:128178851|128179198 hsa-miR-2467-3p 1 1 0
chr9:128178851|128179198 hsa-miR-4691-3p 0 1 0
chr9:128178851|128179198 hsa-miR-6771-5p 1 0 0
chr9:128178851|128179198 hsa-miR-4690-5p 0 1 0
chr9:128178851|128179198 hsa-miR-4732-5p 1 1 0
chr9:128178851|128179198 hsa-miR-6821-3p 0 1 0
chr9:128178851|128179198 hsa-miR-7156-3p 0 1 0
chr9:128178851|128179198 hsa-miR-181b-5p 0 1 0
chr9:128178851|128179198 hsa-miR-6895-5p 1 0 0
chr9:128178851|128179198 hsa-miR-4742-5p 1 0 0
chr9:128178851|128179198 hsa-miR-6499-5p 1 0 0
chr9:128178851|128179198 hsa-miR-3944-5p 0 1 0
chr9:128178851|128179198 hsa-miR-3180-5p 1 0 0
chr9:128178851|128179198 hsa-miR-6814-5p 0 1 0
chr9:128178851|128179198 hsa-miR-6501-3p 0 1 0
chr9:128178851|128179198 hsa-miR-6767-5p 0 1 0
chr9:128178851|128179198 hsa-miR-18a-5p 0 1 0
chr9:128178851|128179198 hsa-miR-449b-3p 0 1 0
chr9:128178851|128179198 hsa-miR-1287-3p 0 1 0
chr9:128178851|128179198 hsa-miR-3177-5p 1 0 0
chr9:128178851|128179198 hsa-miR-181a-5p 0 1 0
chr9:128178851|128179198 hsa-miR-6800-3p 0 1 0
chr9:128178851|128179198 hsa-miR-140-3p 0 1 0
chr9:128178851|128179198 hsa-miR-10400-5p 1 0 0
chr9:128178851|128179198 hsa-miR-1207-5p 1 0 0
chr9:128178851|128179198 hsa-miR-4763-3p 1 0 0
chr9:128178851|128179198 hsa-miR-6893-5p 1 1 0
chr9:128178851|128179198 hsa-miR-6743-5p 1 0 0
chr9:128178851|128179198 hsa-miR-6722-3p 1 0 0
chr9:128178851|128179198 hsa-miR-6808-5p 1 1 0
chr9:128178851|128179198 hsa-miR-1915-3p 0 1 0
chr9:128178851|128179198 hsa-miR-6836-5p 1 1 0
chr9:128178851|128179198 hsa-miR-1909-3p 1 0 0
chr9:128178851|128179198 hsa-miR-4632-5p 0 1 0
chr9:128178851|128179198 hsa-miR-4685-5p 0 1 0
chr9:128178851|128179198 hsa-miR-4726-5p 1 0 0
chr9:128178851|128179198 hsa-miR-675-5p 1 0 0
chr9:128178851|128179198 hsa-miR-6848-5p 1 0 0
chr9:128178851|128179198 hsa-miR-4697-5p 0 1 0
chr9:128178851|128179198 hsa-miR-6831-5p 1 1 0
chr9:128178851|128179198 hsa-miR-1910-3p 0 1 0
chr9:128178851|128179198 hsa-miR-6511a-5p 1 1 0
chr9:128178851|128179198 hsa-miR-7843-5p 1 1 0
chr9:128178851|128179198 hsa-miR-6724-5p 0 1 0
chr9:128178851|128179198 hsa-miR-18b-5p 0 1 0
chr9:128178851|128179198 hsa-miR-3619-5p 1 1 0
chr9:128178851|128179198 hsa-miR-6715b-5p 0 1 0
chr9:128178851|128179198 hsa-miR-6838-5p 0 1 0
chr9:128178851|128179198 hsa-miR-4662a-5p 0 1 0
chr9:128178851|128179198 hsa-miR-5582-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr9:128178851|128179198
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence LRWRMLLWLDAWLCLCVDLWICLCLDLLLQLQLHLPWGL
Nucleotide Sequence CTGCGCTGGAGGATGCTCCTGTGGCTGGACGCTTGGCTGTGCCTGTGTGTGGACCTGTGGATATGTCTGTGTCTGGACCTGCTTCTGCAGCTGCAGCTGCACCTGCCTTGGGGGCTGTGA

CircID chr9:128178851|128179198
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MCLGLHLWLHLLQRLCLLLQLHLPWAL
Nucleotide Sequence ATGTGCCTGGGGCTGCACCTGTGGCTGCACCTGCTTCAGCGGCTCTGCCTCCTGCTGCAGCTGCACCTGCCTTGGGCCCTGTGA

CircID chr9:128178851|128179198
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MCLWLYLWLHLLLWLCLLLQLWLHLLLLQH
Nucleotide Sequence ATGTGCCTGTGGCTGTACCTGTGGCTGCACCTGCTTCTGTGGCTCTGCCTCCTGCTGCAGCTGTGGCTGCACCTGCTTCTGTTGCAGCACTAA

CircID chr9:128178851|128179198
ORF Type ORF4
Protein Length 114
Nucleotide Length 342
Protein Sequence MEDAPVAGRLAVPVCGPVDMSVSGPASAAAAAPALGAVNVPGAAPVAAPASAALPPAAAAPALGPVNVPVAVPVAAPASVALPPAAAVAAPASVAALSALERSVFAPASAALAA
Nucleotide Sequence CTGGAGGATGCTCCTGTGGCTGGACGCTTGGCTGTGCCTGTGTGTGGACCTGTGGATATGTCTGTGTCTGGACCTGCTTCTGCAGCTGCAGCTGCACCTGCCTTGGGGGCTGTGAATGTGCCTGGGGCTGCACCTGTGGCTGCACCTGCTTCAGCGGCTCTGCCTCCTGCTGCAGCTGCACCTGCCTTGGGCCCTGTGAATGTGCCTGTGGCTGTACCTGTGGCTGCACCTGCTTCTGTGGCTCTGCCTCCTGCTGCAGCTGTGGCTGCACCTGCTTCTGTTGCAGCACTAAGTGCTCTGGAGAGGTCTGTGTTTGCGCCTGCTTCTGCAGCTTTGGCTGCA

CircID chr9:128178851|128179198
ORF Type ORF5
Protein Length 112
Nucleotide Length 336
Protein Sequence MQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVQPQAHSQGPRQVQLQQEAEPLKQVQPQVQPQAHSQPPRQVQLQLQKQVQTQTYPQVHTQAQPSVQPQEHPPAQ
Nucleotide Sequence CTGCAGAAGCAGGCGCAAACACAGACCTCTCCAGAGCACTTAGTGCTGCAACAGAAGCAGGTGCAGCCACAGCTGCAGCAGGAGGCAGAGCCACAGAAGCAGGTGCAGCCACAGGTACAGCCACAGGCACATTCACAGGGCCCAAGGCAGGTGCAGCTGCAGCAGGAGGCAGAGCCGCTGAAGCAGGTGCAGCCACAGGTGCAGCCCCAGGCACATTCACAGCCCCCAAGGCAGGTGCAGCTGCAGCTGCAGAAGCAGGTCCAGACACAGACATATCCACAGGTCCACACACAGGCACAGCCAAGCGTCCAGCCACAGGAGCATCCTCCAGCGCAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites