CircRNA Information

General Information
circRNA Basic Information
CircID chr9:128178953|128179084
Strand -
CircType exon
Host Gene ENSG00000148337.18;
Algorism CIRI2;
Sequence CTGCCTTGGGGGCTGTGAATGTGCCTGGGGCTGCACCTGTGGCTGCACCTGCTTCAGCGGCTCTGCCTCCTGCTGCAGCTGCACCTGCCTTGGGCCCTGTGAATGTGCCTGTGGCTGTACCTGTGGCTGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:128178953|128179084 hsa-miR-27a-5p 0 0 1
chr9:128178953|128179084 hsa-miR-27a-3p 0 0 1
chr9:128178953|128179084 hsa-miR-107 0 0 1
chr9:128178953|128179084 hsa-miR-181c-5p 0 0 1
chr9:128178953|128179084 hsa-miR-181c-3p 0 0 1
chr9:128178953|128179084 hsa-miR-214-5p 0 0 1
chr9:128178953|128179084 hsa-miR-214-3p 0 0 1
chr9:128178953|128179084 hsa-miR-27b-5p 0 0 1
chr9:128178953|128179084 hsa-miR-27b-3p 0 0 1
chr9:128178953|128179084 hsa-miR-181d-5p 0 0 1
chr9:128178953|128179084 hsa-miR-181d-3p 0 0 1
chr9:128178953|128179084 hsa-miR-552-5p 0 0 1
chr9:128178953|128179084 hsa-miR-552-3p 0 0 1
chr9:128178953|128179084 hsa-miR-650 1 1 1
chr9:128178953|128179084 hsa-miR-1301-5p 0 0 1
chr9:128178953|128179084 hsa-miR-1301-3p 0 0 1
chr9:128178953|128179084 hsa-miR-940 1 1 1
chr9:128178953|128179084 hsa-miR-1827 0 0 1
chr9:128178953|128179084 hsa-miR-1184 0 0 1
chr9:128178953|128179084 hsa-miR-513a-5p 0 0 1
chr9:128178953|128179084 hsa-miR-103 0 0 1
chr9:128178953|128179084 hsa-miR-220c 0 0 1
chr9:128178953|128179084 hsa-miR-181a 0 0 1
chr9:128178953|128179084 hsa-miR-181b 0 0 1
chr9:128178953|128179084 hsa-miR-602 1 0 0
chr9:128178953|128179084 hsa-miR-764 0 1 0
chr9:128178953|128179084 hsa-miR-665 1 0 0
chr9:128178953|128179084 hsa-miR-548v 0 1 0
chr9:128178953|128179084 hsa-miR-4269 1 1 0
chr9:128178953|128179084 hsa-miR-3665 1 1 0
chr9:128178953|128179084 hsa-miR-3918 0 1 0
chr9:128178953|128179084 hsa-miR-3943 0 1 0
chr9:128178953|128179084 hsa-miR-3135b 1 1 0
chr9:128178953|128179084 hsa-miR-3960 1 0 0
chr9:128178953|128179084 hsa-miR-4736 0 1 0
chr9:128178953|128179084 hsa-miR-5047 0 1 0
chr9:128178953|128179084 hsa-miR-5090 1 0 0
chr9:128178953|128179084 hsa-miR-6081 1 1 0
chr9:128178953|128179084 hsa-miR-6125 1 0 0
chr9:128178953|128179084 hsa-miR-6165 0 1 0
chr9:128178953|128179084 hsa-miR-6765-5p 1 0 0
chr9:128178953|128179084 hsa-miR-1225-3p 1 0 0
chr9:128178953|128179084 hsa-miR-4695-5p 1 1 0
chr9:128178953|128179084 hsa-miR-4722-5p 1 1 0
chr9:128178953|128179084 hsa-miR-4691-3p 0 1 0
chr9:128178953|128179084 hsa-miR-4732-5p 1 0 0
chr9:128178953|128179084 hsa-miR-7156-3p 0 1 0
chr9:128178953|128179084 hsa-miR-181b-5p 0 1 0
chr9:128178953|128179084 hsa-miR-3944-5p 0 1 0
chr9:128178953|128179084 hsa-miR-6814-5p 0 1 0
chr9:128178953|128179084 hsa-miR-18a-5p 0 1 0
chr9:128178953|128179084 hsa-miR-449b-3p 0 1 0
chr9:128178953|128179084 hsa-miR-181a-5p 0 1 0
chr9:128178953|128179084 hsa-miR-140-3p 0 1 0
chr9:128178953|128179084 hsa-miR-10400-5p 1 0 0
chr9:128178953|128179084 hsa-miR-1207-5p 1 0 0
chr9:128178953|128179084 hsa-miR-4763-3p 1 0 0
chr9:128178953|128179084 hsa-miR-6893-5p 1 1 0
chr9:128178953|128179084 hsa-miR-6743-5p 1 0 0
chr9:128178953|128179084 hsa-miR-6722-3p 1 0 0
chr9:128178953|128179084 hsa-miR-6808-5p 0 1 0
chr9:128178953|128179084 hsa-miR-6836-5p 1 1 0
chr9:128178953|128179084 hsa-miR-1909-3p 1 0 0
chr9:128178953|128179084 hsa-miR-6831-5p 1 0 0
chr9:128178953|128179084 hsa-miR-6511a-5p 1 0 0
chr9:128178953|128179084 hsa-miR-6724-5p 0 1 0
chr9:128178953|128179084 hsa-miR-18b-5p 0 1 0
chr9:128178953|128179084 hsa-miR-3619-5p 1 1 0
chr9:128178953|128179084 hsa-miR-5582-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr9:128178953|128179084
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MCLGLHLWLHLLQRLCLLLQLHLPWAL
Nucleotide Sequence ATGTGCCTGGGGCTGCACCTGTGGCTGCACCTGCTTCAGCGGCTCTGCCTCCTGCTGCAGCTGCACCTGCCTTGGGCCCTGTGA

CircID chr9:128178953|128179084
ORF Type ORF2
Protein Length 42
Nucleotide Length 126
Protein Sequence MGAVNVPGAAPVAAPASAALPPAAAAPALGPVNVPVAVPVAA
Nucleotide Sequence TTGGGGGCTGTGAATGTGCCTGGGGCTGCACCTGTGGCTGCACCTGCTTCAGCGGCTCTGCCTCCTGCTGCAGCTGCACCTGCCTTGGGCCCTGTGAATGTGCCTGTGGCTGTACCTGTGGCTGCA

CircID chr9:128178953|128179084
ORF Type ORF3
Protein Length 26
Nucleotide Length 78
Protein Sequence MQQEAEPLKQVQPQVQPQAHSQPPRQ
Nucleotide Sequence CTGCAGCAGGAGGCAGAGCCGCTGAAGCAGGTGCAGCCACAGGTGCAGCCCCAGGCACATTCACAGCCCCCAAGGCAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites