CircNet

General Information

circRNA Basic Information

CircID	chr9:12821403\|12821546
Strand	-
CircType	exon
Host Gene	ENSG00000153714.5;
Algorism	CIRI2;
Sequence	AGACGTCAGGCTCATGCGCCAGTTGCTTGTAATCAATGAGAGCATCGAGTCCATCAAGTGGATGATCGAAGAAAAAGCCACCATTACCAGCAGAGGCAGCAGCCTCAGTGGCAGCCTGTGCAGTTTGTTGGAGAGTCAGAGCAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr9:12821403\|12821546	hsa-miR-345-5p	0	0	1
chr9:12821403\|12821546	hsa-miR-345-3p	0	0	1
chr9:12821403\|12821546	hsa-miR-495-5p	0	0	1
chr9:12821403\|12821546	hsa-miR-495-3p	0	0	1
chr9:12821403\|12821546	hsa-miR-485-5p	0	0	1
chr9:12821403\|12821546	hsa-miR-515-5p	0	1	1
chr9:12821403\|12821546	hsa-miR-138	0	0	1
chr9:12821403\|12821546	hsa-miR-548q	1	0	0
chr9:12821403\|12821546	hsa-miR-4252	0	1	0
chr9:12821403\|12821546	hsa-miR-5691	1	1	0
chr9:12821403\|12821546	hsa-miR-3692-5p	1	1	0
chr9:12821403\|12821546	hsa-miR-6762-3p	0	1	0
chr9:12821403\|12821546	hsa-miR-181a-2-3p	0	1	0
chr9:12821403\|12821546	hsa-miR-656-5p	0	1	0
chr9:12821403\|12821546	hsa-miR-6882-3p	0	1	0
chr9:12821403\|12821546	hsa-miR-3065-5p	0	1	0
chr9:12821403\|12821546	hsa-miR-6499-5p	1	0	0
chr9:12821403\|12821546	hsa-miR-4649-3p	0	1	0
chr9:12821403\|12821546	hsa-miR-3620-5p	1	0	0
chr9:12821403\|12821546	hsa-miR-6805-3p	0	1	0
chr9:12821403\|12821546	hsa-miR-301a-5p	0	1	0
chr9:12821403\|12821546	hsa-miR-519e-5p	0	1	0
chr9:12821403\|12821546	hsa-miR-3119	0	1	0
chr9:12821403\|12821546	hsa-miR-7-1-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr9:12821403\|12821546
ORF Type	ORF1
Protein Length	43
Nucleotide Length	129
Protein Sequence	MRQLLVINESIESIKWMIEEKATITSRGSSLSGSLCSLLESQS
Nucleotide Sequence	ATGCGCCAGTTGCTTGTAATCAATGAGAGCATCGAGTCCATCAAGTGGATGATCGAAGAAAAAGCCACCATTACCAGCAGAGGCAGCAGCCTCAGTGGCAGCCTGTGCAGTTTGTTGGAGAGTCAGAGC

CircID	chr9:12821403\|12821546
ORF Type	ORF2
Protein Length	41
Nucleotide Length	123
Protein Sequence	MHRLPLRLLPLLVMVAFSSIIHLMDSMLSLITSNWRMSLTS
Nucleotide Sequence	CTGCACAGGCTGCCACTGAGGCTGCTGCCTCTGCTGGTAATGGTGGCTTTTTCTTCGATCATCCACTTGATGGACTCGATGCTCTCATTGATTACAAGCAACTGGCGCATGAGCCTGACGTCT

CircID	chr9:12821403\|12821546
ORF Type	ORF3
Protein Length	46
Nucleotide Length	138
Protein Sequence	MTLQQTAQAATEAAASAGNGGFFFDHPLDGLDALIDYKQLAHEPDV
Nucleotide Sequence	CTGACTCTCCAACAAACTGCACAGGCTGCCACTGAGGCTGCTGCCTCTGCTGGTAATGGTGGCTTTTTCTTCGATCATCCACTTGATGGACTCGATGCTCTCATTGATTACAAGCAACTGGCGCATGAGCCTGACGTC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information