CircRNA Information

General Information
circRNA Basic Information
CircID chr9:128360734|128360874
Strand +
CircType exon
Host Gene ENSG00000167114.11;
Algorism CIRI2;
Sequence TCTGTTGACTTCCTGAGTCTGGGGACTTCTGCTCTGGTTCCATTTATAAGCTCCCTGCTCTCTGGGAAGGGCTCGGTGACCCCTTGTCCTCTCCCTACCCTCACCCAAGACATCATCCTGAGAAAACCCGTCAGTCTCAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:128360734|128360874 hsa-miR-21-5p 0 0 1
chr9:128360734|128360874 hsa-miR-21-3p 0 0 1
chr9:128360734|128360874 hsa-miR-340-5p 0 0 1
chr9:128360734|128360874 hsa-miR-340-3p 0 0 1
chr9:128360734|128360874 hsa-miR-431-5p 0 0 1
chr9:128360734|128360874 hsa-miR-431-3p 0 0 1
chr9:128360734|128360874 hsa-miR-522-5p 0 0 1
chr9:128360734|128360874 hsa-miR-522-3p 0 0 1
chr9:128360734|128360874 hsa-miR-505-5p 0 0 1
chr9:128360734|128360874 hsa-miR-505-3p 0 0 1
chr9:128360734|128360874 hsa-miR-510-5p 0 0 1
chr9:128360734|128360874 hsa-miR-510-3p 0 0 1
chr9:128360734|128360874 hsa-miR-635 0 0 1
chr9:128360734|128360874 hsa-miR-421 0 0 1
chr9:128360734|128360874 hsa-miR-298 0 0 1
chr9:128360734|128360874 hsa-miR-873-5p 0 0 1
chr9:128360734|128360874 hsa-miR-873-3p 0 0 1
chr9:128360734|128360874 hsa-miR-920 1 1 1
chr9:128360734|128360874 hsa-miR-1262 0 0 1
chr9:128360734|128360874 hsa-miR-1266-5p 0 0 1
chr9:128360734|128360874 hsa-miR-1266-3p 0 0 1
chr9:128360734|128360874 hsa-miR-1321 0 0 1
chr9:128360734|128360874 hsa-miR-615-3p 0 0 1
chr9:128360734|128360874 hsa-miR-590-5p 0 0 1
chr9:128360734|128360874 hsa-miR-1233 0 0 1
chr9:128360734|128360874 hsa-miR-129-3p 0 0 1
chr9:128360734|128360874 hsa-miR-637 1 0 0
chr9:128360734|128360874 hsa-miR-762 1 0 0
chr9:128360734|128360874 hsa-miR-940 1 0 0
chr9:128360734|128360874 hsa-miR-3132 1 0 0
chr9:128360734|128360874 hsa-miR-3141 1 0 0
chr9:128360734|128360874 hsa-miR-4270 1 1 0
chr9:128360734|128360874 hsa-miR-4468 0 1 0
chr9:128360734|128360874 hsa-miR-2392 1 0 0
chr9:128360734|128360874 hsa-miR-4513 0 1 0
chr9:128360734|128360874 hsa-miR-4518 1 1 0
chr9:128360734|128360874 hsa-miR-4706 1 0 0
chr9:128360734|128360874 hsa-miR-4710 1 1 0
chr9:128360734|128360874 hsa-miR-4739 1 0 0
chr9:128360734|128360874 hsa-miR-5787 1 0 0
chr9:128360734|128360874 hsa-miR-6081 1 0 0
chr9:128360734|128360874 hsa-miR-6090 1 0 0
chr9:128360734|128360874 hsa-miR-504-3p 1 0 0
chr9:128360734|128360874 hsa-miR-133a-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6825-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6894-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6510-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6880-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6741-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6721-5p 1 1 0
chr9:128360734|128360874 hsa-miR-197-5p 1 0 0
chr9:128360734|128360874 hsa-miR-7845-5p 1 0 0
chr9:128360734|128360874 hsa-miR-491-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6748-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6798-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6760-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6881-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6786-5p 1 0 0
chr9:128360734|128360874 hsa-miR-1226-5p 1 0 0
chr9:128360734|128360874 hsa-miR-1229-5p 1 0 0
chr9:128360734|128360874 hsa-miR-296-3p 1 0 0
chr9:128360734|128360874 hsa-miR-4732-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6847-5p 1 0 0
chr9:128360734|128360874 hsa-miR-149-3p 1 0 0
chr9:128360734|128360874 hsa-miR-3162-5p 1 1 0
chr9:128360734|128360874 hsa-miR-7112-5p 1 0 0
chr9:128360734|128360874 hsa-miR-2355-5p 0 1 0
chr9:128360734|128360874 hsa-miR-5004-5p 0 1 0
chr9:128360734|128360874 hsa-miR-3664-3p 0 1 0
chr9:128360734|128360874 hsa-miR-1207-5p 1 0 0
chr9:128360734|128360874 hsa-miR-4763-3p 1 0 0
chr9:128360734|128360874 hsa-miR-6769b-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6778-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6787-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6812-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6870-5p 1 0 0
chr9:128360734|128360874 hsa-miR-1343-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6726-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6743-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6756-5p 1 1 0
chr9:128360734|128360874 hsa-miR-6803-5p 1 1 0
chr9:128360734|128360874 hsa-miR-1249-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6722-3p 1 0 0
chr9:128360734|128360874 hsa-miR-6763-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6779-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6797-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6808-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6879-5p 1 0 0
chr9:128360734|128360874 hsa-miR-7111-5p 1 0 0
chr9:128360734|128360874 hsa-miR-4728-5p 1 0 0
chr9:128360734|128360874 hsa-miR-5196-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6780b-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6836-5p 1 0 0
chr9:128360734|128360874 hsa-miR-1237-5p 1 0 0
chr9:128360734|128360874 hsa-miR-1909-3p 1 0 0
chr9:128360734|128360874 hsa-miR-4649-5p 1 0 0
chr9:128360734|128360874 hsa-miR-4701-3p 1 1 0
chr9:128360734|128360874 hsa-miR-4749-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6729-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6735-5p 1 1 0
chr9:128360734|128360874 hsa-miR-675-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6777-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6794-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6846-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6848-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6889-5p 1 0 0
chr9:128360734|128360874 hsa-miR-4436b-3p 1 0 0
chr9:128360734|128360874 hsa-miR-4723-5p 1 0 0
chr9:128360734|128360874 hsa-miR-939-5p 1 0 0
chr9:128360734|128360874 hsa-miR-3940-5p 1 0 0
chr9:128360734|128360874 hsa-miR-6731-5p 1 1 0
chr9:128360734|128360874 hsa-miR-6736-5p 1 1 0
chr9:128360734|128360874 hsa-miR-10398-3p 1 1 0
chr9:128360734|128360874 hsa-miR-6891-5p 1 0 0
chr9:128360734|128360874 hsa-miR-5591-5p 0 1 0
chr9:128360734|128360874 hsa-miR-6884-5p 1 0 0
chr9:128360734|128360874 hsa-miR-137-5p 1 0 0
chr9:128360734|128360874 hsa-miR-129-1-3p 0 1 0
chr9:128360734|128360874 hsa-miR-129-2-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr9:128360734|128360874
ORF Type ORF1
Protein Length 43
Nucleotide Length 129
Protein Sequence MSLGTSALVPFISSLLSGKGSVTPCPLPTLTQDIILRKPVSLS
Nucleotide Sequence CTGAGTCTGGGGACTTCTGCTCTGGTTCCATTTATAAGCTCCCTGCTCTCTGGGAAGGGCTCGGTGACCCCTTGTCCTCTCCCTACCCTCACCCAAGACATCATCCTGAGAAAACCCGTCAGTCTCAGC
CircID chr9:128360734|128360874
ORF Type ORF2
Protein Length 36
Nucleotide Length 108
Protein Sequence MGEGRERTRGHRALPREQGAYKWNQSRSPQTQEVNR
Nucleotide Sequence TTGGGTGAGGGTAGGGAGAGGACAAGGGGTCACCGAGCCCTTCCCAGAGAGCAGGGAGCTTATAAATGGAACCAGAGCAGAAGTCCCCAGACTCAGGAAGTCAACAGA
CircID chr9:128360734|128360874
ORF Type ORF3
Protein Length 46
Nucleotide Length 138
Protein Sequence LRLTGFLRMMSWVRVGRGQGVTEPFPESRELINGTRAEVPRLRKST
Nucleotide Sequence CTGAGACTGACGGGTTTTCTCAGGATGATGTCTTGGGTGAGGGTAGGGAGAGGACAAGGGGTCACCGAGCCCTTCCCAGAGAGCAGGGAGCTTATAAATGGAACCAGAGCAGAAGTCCCCAGACTCAGGAAGTCAACA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab