CircRNA Information

General Information
circRNA Basic Information
CircID chr9:128633831|128633982
Strand -
CircType exon
Host Gene ENSG00000119333.10;
Algorism CIRI2;
Sequence CTTCACTGTGCCCTGGGCATCGCCCGCAGCCAAGAGCTGAGTCTGCTGGCTGTTGAACTCCAGACAGTAGACAGGGCTTTCATCCTGGGTTTGCTTGATCAAAACTGTGGGTTTCTGGGAGCTTTTCTGGAGATCAAACAGCTGCACGTCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:128633831|128633982 hsa-miR-604 0 0 1
chr9:128633831|128633982 hsa-miR-647 0 0 1
chr9:128633831|128633982 hsa-miR-421 0 0 1
chr9:128633831|128633982 hsa-miR-1301-5p 0 0 1
chr9:128633831|128633982 hsa-miR-1301-3p 0 0 1
chr9:128633831|128633982 hsa-miR-766-5p 0 0 1
chr9:128633831|128633982 hsa-miR-766-3p 0 0 1
chr9:128633831|128633982 hsa-miR-922 0 0 1
chr9:128633831|128633982 hsa-miR-934 0 0 1
chr9:128633831|128633982 hsa-miR-1231 0 0 1
chr9:128633831|128633982 hsa-miR-512-5p 0 0 1
chr9:128633831|128633982 hsa-miR-146b-3p 0 0 1
chr9:128633831|128633982 hsa-miR-339-5p 0 0 1
chr9:128633831|128633982 hsa-miR-128 0 0 1
chr9:128633831|128633982 hsa-miR-516b 0 0 1
chr9:128633831|128633982 hsa-miR-1826 0 0 1
chr9:128633831|128633982 hsa-miR-4421 0 1 0
chr9:128633831|128633982 hsa-miR-4734 1 0 0
chr9:128633831|128633982 hsa-miR-4767 0 1 0
chr9:128633831|128633982 hsa-miR-6796-3p 1 0 0
chr9:128633831|128633982 hsa-miR-6717-5p 0 1 0
chr9:128633831|128633982 hsa-miR-516b-5p 0 1 0
chr9:128633831|128633982 hsa-miR-7106-3p 1 0 0
chr9:128633831|128633982 hsa-miR-208a-5p 0 1 0
chr9:128633831|128633982 hsa-miR-6779-3p 0 1 0
chr9:128633831|128633982 hsa-miR-4712-3p 0 1 0
chr9:128633831|128633982 hsa-miR-1915-3p 0 1 0
chr9:128633831|128633982 hsa-miR-4685-5p 0 1 0
chr9:128633831|128633982 hsa-miR-6837-5p 0 1 0
chr9:128633831|128633982 hsa-miR-6764-5p 0 1 0
chr9:128633831|128633982 hsa-miR-10527-5p 0 1 0
chr9:128633831|128633982 hsa-miR-26a-5p 1 0 0
chr9:128633831|128633982 hsa-miR-26b-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr9:128633831|128633982
ORF Type ORF1
Protein Length 46
Nucleotide Length 138
Protein Sequence MGIARSQELSLLAVELQTVDRAFILGLLDQNCGFLGAFLEIKQLHV
Nucleotide Sequence CTGGGCATCGCCCGCAGCCAAGAGCTGAGTCTGCTGGCTGTTGAACTCCAGACAGTAGACAGGGCTTTCATCCTGGGTTTGCTTGATCAAAACTGTGGGTTTCTGGGAGCTTTTCTGGAGATCAAACAGCTGCACGTC

CircID chr9:128633831|128633982
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MKALSTVWSSTASRLSSWLRAMPRAQ
Nucleotide Sequence ATGAAAGCCCTGTCTACTGTCTGGAGTTCAACAGCCAGCAGACTCAGCTCTTGGCTGCGGGCGATGCCCAGGGCACAGTGA

CircID chr9:128633831|128633982
ORF Type ORF3
Protein Length 47
Nucleotide Length 141
Protein Sequence MFDLQKSSQKPTVLIKQTQDESPVYCLEFNSQQTQLLAAGDAQGTVK
Nucleotide Sequence CTGTTTGATCTCCAGAAAAGCTCCCAGAAACCCACAGTTTTGATCAAGCAAACCCAGGATGAAAGCCCTGTCTACTGTCTGGAGTTCAACAGCCAGCAGACTCAGCTCTTGGCTGCGGGCGATGCCCAGGGCACAGTGAAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites