CircRNA Information

General Information
circRNA Basic Information
CircID chr9:128634726|128634900
Strand -
CircType exon
Host Gene ENSG00000119333.10;
Algorism CIRI2;
Sequence CGCCGTGGGGGGAGAAGGTAAACTGTGCTGGGGCCCGCAGGGGCACGGAGCTGGGCATCCGCGTGAGGGCTGCCTCTCCAGCTGCCAGGGAACACTTGAGCGGGAAGCCGCCTTCCGTGCCCAGAATGAACAGCCTAGGGTCAAAGCTGGAGAAGGCCACTGCCGTGGCGCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:128634726|128634900 hsa-miR-34a-5p 0 0 1
chr9:128634726|128634900 hsa-miR-34a-3p 0 0 1
chr9:128634726|128634900 hsa-miR-185-5p 0 0 1
chr9:128634726|128634900 hsa-miR-185-3p 0 0 1
chr9:128634726|128634900 hsa-miR-449a 0 1 1
chr9:128634726|128634900 hsa-miR-504-5p 0 0 1
chr9:128634726|128634900 hsa-miR-504-3p 0 0 1
chr9:128634726|128634900 hsa-miR-564 0 0 1
chr9:128634726|128634900 hsa-miR-612 1 0 1
chr9:128634726|128634900 hsa-miR-645 0 1 1
chr9:128634726|128634900 hsa-miR-449b-5p 0 0 1
chr9:128634726|128634900 hsa-miR-449b-3p 0 0 1
chr9:128634726|128634900 hsa-miR-766-5p 0 0 1
chr9:128634726|128634900 hsa-miR-766-3p 0 0 1
chr9:128634726|128634900 hsa-miR-1298-5p 0 0 1
chr9:128634726|128634900 hsa-miR-1298-3p 0 0 1
chr9:128634726|128634900 hsa-miR-1206 0 0 1
chr9:128634726|128634900 hsa-miR-1827 0 0 1
chr9:128634726|128634900 hsa-miR-296-5p 0 0 1
chr9:128634726|128634900 hsa-miR-885-3p 0 0 1
chr9:128634726|128634900 hsa-miR-1207-3p 0 0 1
chr9:128634726|128634900 hsa-miR-34c-5p 0 0 1
chr9:128634726|128634900 hsa-miR-515-5p 0 0 1
chr9:128634726|128634900 hsa-miR-1274a 0 0 1
chr9:128634726|128634900 hsa-miR-1285 0 0 1
chr9:128634726|128634900 hsa-miR-326 1 0 0
chr9:128634726|128634900 hsa-miR-650 1 0 0
chr9:128634726|128634900 hsa-miR-1539 1 0 0
chr9:128634726|128634900 hsa-miR-3135a 1 0 0
chr9:128634726|128634900 hsa-miR-3181 1 0 0
chr9:128634726|128634900 hsa-miR-4322 1 0 0
chr9:128634726|128634900 hsa-miR-4267 0 1 0
chr9:128634726|128634900 hsa-miR-4292 1 0 0
chr9:128634726|128634900 hsa-miR-4462 0 1 0
chr9:128634726|128634900 hsa-miR-1587 1 0 0
chr9:128634726|128634900 hsa-miR-4674 1 0 0
chr9:128634726|128634900 hsa-miR-4721 1 0 0
chr9:128634726|128634900 hsa-miR-4734 1 1 0
chr9:128634726|128634900 hsa-miR-4741 1 0 0
chr9:128634726|128634900 hsa-miR-4767 1 0 0
chr9:128634726|128634900 hsa-miR-6125 1 1 0
chr9:128634726|128634900 hsa-miR-6860 0 1 0
chr9:128634726|128634900 hsa-miR-8073 0 1 0
chr9:128634726|128634900 hsa-miR-9899 1 1 0
chr9:128634726|128634900 hsa-miR-134-3p 1 0 0
chr9:128634726|128634900 hsa-miR-4687-3p 1 0 0
chr9:128634726|128634900 hsa-miR-210-5p 1 1 0
chr9:128634726|128634900 hsa-miR-3622a-5p 1 0 0
chr9:128634726|128634900 hsa-miR-1225-3p 1 0 0
chr9:128634726|128634900 hsa-miR-874-5p 1 1 0
chr9:128634726|128634900 hsa-miR-6741-5p 1 0 0
chr9:128634726|128634900 hsa-miR-6727-5p 1 0 0
chr9:128634726|128634900 hsa-miR-4725-5p 1 0 0
chr9:128634726|128634900 hsa-miR-942-5p 0 1 0
chr9:128634726|128634900 hsa-miR-6763-3p 1 0 0
chr9:128634726|128634900 hsa-miR-652-5p 1 0 0
chr9:128634726|128634900 hsa-miR-4783-5p 1 0 0
chr9:128634726|128634900 hsa-miR-4707-5p 1 0 0
chr9:128634726|128634900 hsa-miR-6811-3p 1 0 0
chr9:128634726|128634900 hsa-miR-6804-3p 1 0 0
chr9:128634726|128634900 hsa-miR-6720-3p 1 0 0
chr9:128634726|128634900 hsa-miR-6513-3p 0 1 0
chr9:128634726|128634900 hsa-miR-3605-3p 0 1 0
chr9:128634726|128634900 hsa-miR-4749-3p 1 0 0
chr9:128634726|128634900 hsa-miR-7158-5p 1 0 0
chr9:128634726|128634900 hsa-miR-3186-3p 0 1 0
chr9:128634726|128634900 hsa-miR-6774-5p 1 0 0
chr9:128634726|128634900 hsa-miR-320a-5p 0 1 0
chr9:128634726|128634900 hsa-miR-1915-3p 1 0 0
chr9:128634726|128634900 hsa-miR-3620-5p 1 0 0
chr9:128634726|128634900 hsa-miR-5189-5p 1 1 0
chr9:128634726|128634900 hsa-miR-4685-5p 1 0 0
chr9:128634726|128634900 hsa-miR-4745-3p 1 0 0
chr9:128634726|128634900 hsa-miR-3187-5p 0 1 0
chr9:128634726|128634900 hsa-miR-6877-3p 1 0 0
chr9:128634726|128634900 hsa-miR-6724-5p 1 0 0
chr9:128634726|128634900 hsa-miR-6791-5p 1 0 0
chr9:128634726|128634900 hsa-miR-4757-5p 1 0 0
chr9:128634726|128634900 hsa-miR-6810-3p 1 0 0
chr9:128634726|128634900 hsa-miR-9851-3p 1 0 0
chr9:128634726|128634900 hsa-miR-6819-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr9:128634726|128634900
ORF Type ORF1
Protein Length 51
Nucleotide Length 153
Protein Sequence MCWGPQGHGAGHPREGCLSSCQGTLEREAAFRAQNEQPRVKAGEGHCRGAH
Nucleotide Sequence CTGTGCTGGGGCCCGCAGGGGCACGGAGCTGGGCATCCGCGTGAGGGCTGCCTCTCCAGCTGCCAGGGAACACTTGAGCGGGAAGCCGCCTTCCGTGCCCAGAATGAACAGCCTAGGGTCAAAGCTGGAGAAGGCCACTGCCGTGGCGCCCAC

CircID chr9:128634726|128634900
ORF Type ORF2
Protein Length 41
Nucleotide Length 123
Protein Sequence MGIRVRAASPAAREHLSGKPPSVPRMNSLGSKLEKATAVAP
Nucleotide Sequence CTGGGCATCCGCGTGAGGGCTGCCTCTCCAGCTGCCAGGGAACACTTGAGCGGGAAGCCGCCTTCCGTGCCCAGAATGAACAGCCTAGGGTCAAAGCTGGAGAAGGCCACTGCCGTGGCGCCC

CircID chr9:128634726|128634900
ORF Type ORF3
Protein Length 44
Nucleotide Length 132
Protein Sequence MFILGTEGGFPLKCSLAAGEAALTRMPSSVPLRAPAQFTFSPHG
Nucleotide Sequence CTGTTCATTCTGGGCACGGAAGGCGGCTTCCCGCTCAAGTGTTCCCTGGCAGCTGGAGAGGCAGCCCTCACGCGGATGCCCAGCTCCGTGCCCCTGCGGGCCCCAGCACAGTTTACCTTCTCCCCCCACGGC

CircID chr9:128634726|128634900
ORF Type ORF4
Protein Length 48
Nucleotide Length 144
Protein Sequence MTLGCSFWARKAASRSSVPWQLERQPSRGCPAPCPCGPQHSLPSPPTA
Nucleotide Sequence TTGACCCTAGGCTGTTCATTCTGGGCACGGAAGGCGGCTTCCCGCTCAAGTGTTCCCTGGCAGCTGGAGAGGCAGCCCTCACGCGGATGCCCAGCTCCGTGCCCCTGCGGGCCCCAGCACAGTTTACCTTCTCCCCCCACGGCG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites