CircRNA Information

General Information
circRNA Basic Information
CircID chr9:128820909|128821113
Strand -
CircType exon
Host Gene ENSG00000198917.10;
Algorism CIRI2;
Sequence TCACAGGGCCAGGCTTGCCCCAGGCTCTGGGTCAATACCAGTTCCCTACTCATCTGGTTTCTTGGCAAGCCTGTCAGCTTCCCTGCCTCGAGTCCCCTCATTCCACCTCCACAGCCAAAGACCTGTCGGGTACCCCTGACCATCTCTCCTCTGCCCATGGGCAGCAGCAGGCCCTGAATCTGCCCCCGCTTCTCCCTGCTGTCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:128820909|128821113 hsa-miR-214-5p 0 0 1
chr9:128820909|128821113 hsa-miR-214-3p 0 0 1
chr9:128820909|128821113 hsa-miR-185-5p 0 0 1
chr9:128820909|128821113 hsa-miR-185-3p 0 0 1
chr9:128820909|128821113 hsa-miR-206 0 0 1
chr9:128820909|128821113 hsa-miR-370-5p 0 0 1
chr9:128820909|128821113 hsa-miR-370-3p 0 0 1
chr9:128820909|128821113 hsa-miR-328-5p 0 0 1
chr9:128820909|128821113 hsa-miR-328-3p 0 0 1
chr9:128820909|128821113 hsa-miR-613 0 0 1
chr9:128820909|128821113 hsa-miR-647 0 0 1
chr9:128820909|128821113 hsa-miR-661 0 1 1
chr9:128820909|128821113 hsa-miR-940 0 0 1
chr9:128820909|128821113 hsa-miR-1291 0 0 1
chr9:128820909|128821113 hsa-miR-1827 0 0 1
chr9:128820909|128821113 hsa-miR-486-3p 0 0 1
chr9:128820909|128821113 hsa-miR-146b-3p 0 0 1
chr9:128820909|128821113 hsa-miR-423-5p 0 0 1
chr9:128820909|128821113 hsa-miR-1207-5p 1 1 1
chr9:128820909|128821113 hsa-miR-582-3p 0 0 1
chr9:128820909|128821113 hsa-miR-542-3p 0 0 1
chr9:128820909|128821113 hsa-miR-9 0 0 1
chr9:128820909|128821113 hsa-miR-1 0 0 1
chr9:128820909|128821113 hsa-miR-608 1 0 0
chr9:128820909|128821113 hsa-miR-637 1 0 0
chr9:128820909|128821113 hsa-miR-663a 1 0 0
chr9:128820909|128821113 hsa-miR-658 1 0 0
chr9:128820909|128821113 hsa-miR-762 1 0 0
chr9:128820909|128821113 hsa-miR-761 0 1 0
chr9:128820909|128821113 hsa-miR-298 1 0 0
chr9:128820909|128821113 hsa-miR-760 1 0 0
chr9:128820909|128821113 hsa-miR-921 1 0 0
chr9:128820909|128821113 hsa-miR-936 1 0 0
chr9:128820909|128821113 hsa-miR-1182 1 0 0
chr9:128820909|128821113 hsa-miR-1183 1 0 0
chr9:128820909|128821113 hsa-miR-1253 1 0 0
chr9:128820909|128821113 hsa-miR-1268a 1 0 0
chr9:128820909|128821113 hsa-miR-2861 0 1 0
chr9:128820909|128821113 hsa-miR-3132 1 1 0
chr9:128820909|128821113 hsa-miR-3196 1 0 0
chr9:128820909|128821113 hsa-miR-4270 1 1 0
chr9:128820909|128821113 hsa-miR-3918 0 1 0
chr9:128820909|128821113 hsa-miR-3945 1 0 0
chr9:128820909|128821113 hsa-miR-1268b 1 0 0
chr9:128820909|128821113 hsa-miR-4441 0 1 0
chr9:128820909|128821113 hsa-miR-4447 1 0 0
chr9:128820909|128821113 hsa-miR-4450 1 0 0
chr9:128820909|128821113 hsa-miR-4467 1 0 0
chr9:128820909|128821113 hsa-miR-4488 1 0 0
chr9:128820909|128821113 hsa-miR-4506 1 0 0
chr9:128820909|128821113 hsa-miR-4516 1 0 0
chr9:128820909|128821113 hsa-miR-4526 0 1 0
chr9:128820909|128821113 hsa-miR-4530 1 0 0
chr9:128820909|128821113 hsa-miR-4533 1 0 0
chr9:128820909|128821113 hsa-miR-3960 1 0 0
chr9:128820909|128821113 hsa-miR-4651 1 0 0
chr9:128820909|128821113 hsa-miR-4654 1 0 0
chr9:128820909|128821113 hsa-miR-4656 1 0 0
chr9:128820909|128821113 hsa-miR-4657 1 1 0
chr9:128820909|128821113 hsa-miR-4674 1 0 0
chr9:128820909|128821113 hsa-miR-4675 1 0 0
chr9:128820909|128821113 hsa-miR-4688 1 0 0
chr9:128820909|128821113 hsa-miR-4689 1 1 0
chr9:128820909|128821113 hsa-miR-4706 1 1 0
chr9:128820909|128821113 hsa-miR-4721 1 0 0
chr9:128820909|128821113 hsa-miR-4739 1 1 0
chr9:128820909|128821113 hsa-miR-4767 1 0 0
chr9:128820909|128821113 hsa-miR-5090 1 0 0
chr9:128820909|128821113 hsa-miR-5194 1 0 0
chr9:128820909|128821113 hsa-miR-5572 1 0 0
chr9:128820909|128821113 hsa-miR-5703 1 1 0
chr9:128820909|128821113 hsa-miR-5787 1 0 0
chr9:128820909|128821113 hsa-miR-6165 1 0 0
chr9:128820909|128821113 hsa-miR-6860 1 0 0
chr9:128820909|128821113 hsa-miR-7150 1 0 0
chr9:128820909|128821113 hsa-miR-7706 1 0 0
chr9:128820909|128821113 hsa-miR-8059 0 1 0
chr9:128820909|128821113 hsa-miR-8072 1 0 0
chr9:128820909|128821113 hsa-miR-8075 1 0 0
chr9:128820909|128821113 hsa-miR-8085 1 0 0
chr9:128820909|128821113 hsa-miR-11399 1 0 0
chr9:128820909|128821113 hsa-miR-12114 0 1 0
chr9:128820909|128821113 hsa-miR-12118 1 0 0
chr9:128820909|128821113 hsa-miR-4433b-3p 1 0 0
chr9:128820909|128821113 hsa-miR-6734-5p 1 1 0
chr9:128820909|128821113 hsa-miR-6765-5p 1 0 0
chr9:128820909|128821113 hsa-miR-3150a-3p 1 0 0
chr9:128820909|128821113 hsa-miR-6861-5p 1 0 0
chr9:128820909|128821113 hsa-miR-7106-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6825-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6857-5p 1 0 0
chr9:128820909|128821113 hsa-miR-4687-3p 1 0 0
chr9:128820909|128821113 hsa-miR-6799-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6510-5p 1 1 0
chr9:128820909|128821113 hsa-miR-6728-5p 1 1 0
chr9:128820909|128821113 hsa-miR-8071 1 0 0
chr9:128820909|128821113 hsa-miR-139-3p 1 0 0
chr9:128820909|128821113 hsa-miR-6833-5p 1 0 0
chr9:128820909|128821113 hsa-miR-3622a-5p 1 0 0
chr9:128820909|128821113 hsa-miR-5187-5p 1 0 0
chr9:128820909|128821113 hsa-miR-7114-5p 1 1 0
chr9:128820909|128821113 hsa-miR-6089 1 0 0
chr9:128820909|128821113 hsa-miR-6880-5p 1 0 0
chr9:128820909|128821113 hsa-miR-7847-3p 1 1 0
chr9:128820909|128821113 hsa-miR-6746-5p 1 0 0
chr9:128820909|128821113 hsa-miR-4722-5p 1 0 0
chr9:128820909|128821113 hsa-miR-3064-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6727-5p 1 1 0
chr9:128820909|128821113 hsa-miR-3622b-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6721-5p 1 0 0
chr9:128820909|128821113 hsa-miR-4655-5p 1 0 0
chr9:128820909|128821113 hsa-miR-197-5p 1 0 0
chr9:128820909|128821113 hsa-miR-8069 1 1 0
chr9:128820909|128821113 hsa-miR-3180-3p 1 0 0
chr9:128820909|128821113 hsa-miR-6748-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6796-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6732-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6805-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6798-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6760-5p 1 1 0
chr9:128820909|128821113 hsa-miR-2467-3p 1 1 0
chr9:128820909|128821113 hsa-miR-6782-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6514-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6874-5p 1 0 0
chr9:128820909|128821113 hsa-miR-3150b-3p 0 1 0
chr9:128820909|128821113 hsa-miR-6850-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6786-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6835-5p 1 0 0
chr9:128820909|128821113 hsa-miR-7109-5p 1 0 0
chr9:128820909|128821113 hsa-miR-1226-5p 1 0 0
chr9:128820909|128821113 hsa-miR-1229-5p 1 0 0
chr9:128820909|128821113 hsa-miR-4640-5p 1 0 0
chr9:128820909|128821113 hsa-miR-885-3p 1 0 0
chr9:128820909|128821113 hsa-miR-3127-5p 0 1 0
chr9:128820909|128821113 hsa-miR-1908-5p 1 0 0
chr9:128820909|128821113 hsa-miR-1228-5p 1 0 0
chr9:128820909|128821113 hsa-miR-4650-3p 1 0 0
chr9:128820909|128821113 hsa-miR-4690-5p 1 0 0
chr9:128820909|128821113 hsa-miR-877-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6847-5p 0 1 0
chr9:128820909|128821113 hsa-miR-4787-5p 1 0 0
chr9:128820909|128821113 hsa-miR-149-3p 1 0 0
chr9:128820909|128821113 hsa-miR-6824-5p 1 1 0
chr9:128820909|128821113 hsa-miR-3162-5p 1 0 0
chr9:128820909|128821113 hsa-miR-194-3p 1 0 0
chr9:128820909|128821113 hsa-miR-3191-3p 1 0 0
chr9:128820909|128821113 hsa-miR-4652-5p 0 1 0
chr9:128820909|128821113 hsa-miR-744-5p 1 0 0
chr9:128820909|128821113 hsa-miR-2277-5p 1 0 0
chr9:128820909|128821113 hsa-miR-1306-3p 1 0 0
chr9:128820909|128821113 hsa-miR-6505-5p 1 0 0
chr9:128820909|128821113 hsa-miR-10400-5p 1 0 0
chr9:128820909|128821113 hsa-miR-1233-5p 1 0 0
chr9:128820909|128821113 hsa-miR-4763-3p 1 1 0
chr9:128820909|128821113 hsa-miR-6778-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6787-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6816-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6865-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6870-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6775-5p 1 1 0
chr9:128820909|128821113 hsa-miR-1343-5p 1 0 0
chr9:128820909|128821113 hsa-miR-5001-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6726-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6737-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6743-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6752-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6754-5p 1 1 0
chr9:128820909|128821113 hsa-miR-6803-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6819-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6842-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6851-5p 1 1 0
chr9:128820909|128821113 hsa-miR-7110-5p 1 0 0
chr9:128820909|128821113 hsa-miR-11181-3p 1 0 0
chr9:128820909|128821113 hsa-miR-1249-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6722-3p 1 1 0
chr9:128820909|128821113 hsa-miR-6751-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6797-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6808-5p 1 1 0
chr9:128820909|128821113 hsa-miR-6879-5p 1 1 0
chr9:128820909|128821113 hsa-miR-7111-5p 1 0 0
chr9:128820909|128821113 hsa-miR-4728-5p 1 0 0
chr9:128820909|128821113 hsa-miR-5189-5p 0 1 0
chr9:128820909|128821113 hsa-miR-5196-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6780b-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6836-5p 1 0 0
chr9:128820909|128821113 hsa-miR-10396a-5p 1 0 0
chr9:128820909|128821113 hsa-miR-10396b-5p 1 0 0
chr9:128820909|128821113 hsa-miR-1237-5p 1 0 0
chr9:128820909|128821113 hsa-miR-1909-3p 1 0 0
chr9:128820909|128821113 hsa-miR-4649-5p 1 0 0
chr9:128820909|128821113 hsa-miR-4685-5p 0 1 0
chr9:128820909|128821113 hsa-miR-4725-3p 1 0 0
chr9:128820909|128821113 hsa-miR-4745-5p 1 0 0
chr9:128820909|128821113 hsa-miR-4749-5p 1 1 0
chr9:128820909|128821113 hsa-miR-6735-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6738-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6777-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6794-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6795-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6846-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6848-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6858-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6887-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6889-5p 1 0 0
chr9:128820909|128821113 hsa-miR-4436b-3p 1 0 0
chr9:128820909|128821113 hsa-miR-4697-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6831-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6885-5p 1 0 0
chr9:128820909|128821113 hsa-miR-939-5p 1 0 0
chr9:128820909|128821113 hsa-miR-1238-5p 1 0 0
chr9:128820909|128821113 hsa-miR-4758-5p 1 0 0
chr9:128820909|128821113 hsa-miR-4769-5p 1 0 0
chr9:128820909|128821113 hsa-miR-365a-5p 1 0 0
chr9:128820909|128821113 hsa-miR-365b-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6511a-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6731-5p 1 0 0
chr9:128820909|128821113 hsa-miR-7843-5p 1 0 0
chr9:128820909|128821113 hsa-miR-1914-3p 1 0 0
chr9:128820909|128821113 hsa-miR-4665-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6891-5p 1 0 0
chr9:128820909|128821113 hsa-miR-6750-5p 1 1 0
chr9:128820909|128821113 hsa-miR-3184-5p 1 0 0
chr9:128820909|128821113 hsa-miR-3689d 1 0 0
chr9:128820909|128821113 hsa-miR-6893-3p 0 1 0
chr9:128820909|128821113 hsa-miR-1295b-5p 0 1 0
chr9:128820909|128821113 hsa-miR-3619-5p 1 1 0
chr9:128820909|128821113 hsa-miR-1912-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr9:128820909|128821113
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MASLSASLPRVPSFHLHSQRPVGYP
Nucleotide Sequence TTGGCAAGCCTGTCAGCTTCCCTGCCTCGAGTCCCCTCATTCCACCTCCACAGCCAAAGACCTGTCGGGTACCCCTGA
CircID chr9:128820909|128821113
ORF Type ORF2
Protein Length 63
Nucleotide Length 189
Protein Sequence MPQALGQYQFPTHLVSWQACQLPCLESPHSTSTAKDLSGTPDHLSSAHGQQQALNLPPLLPAV
Nucleotide Sequence TTGCCCCAGGCTCTGGGTCAATACCAGTTCCCTACTCATCTGGTTTCTTGGCAAGCCTGTCAGCTTCCCTGCCTCGAGTCCCCTCATTCCACCTCCACAGCCAAAGACCTGTCGGGTACCCCTGACCATCTCTCCTCTGCCCATGGGCAGCAGCAGGCCCTGAATCTGCCCCCGCTTCTCCCTGCTGTC
CircID chr9:128820909|128821113
ORF Type ORF3
Protein Length 56
Nucleotide Length 168
Protein Sequence MLLPMGRGEMVRGTRQVFGCGGGMRGLEAGKLTGLPRNQMSRELVLTQSLGQAWPC
Nucleotide Sequence CTGCTGCTGCCCATGGGCAGAGGAGAGATGGTCAGGGGTACCCGACAGGTCTTTGGCTGTGGAGGTGGAATGAGGGGACTCGAGGCAGGGAAGCTGACAGGCTTGCCAAGAAACCAGATGAGTAGGGAACTGGTATTGACCCAGAGCCTGGGGCAAGCCTGGCCCTGT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab