CircRNA Information

General Information
circRNA Basic Information
CircID chr9:131261393|131261567
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTTCTTCTGTCTGAGGGTTATGATTGTAACAGCAGCAGTGATGACAGTGACTCCGAGCTACTGTCTGACCCCCTGCCCCCAGAACGTCAAAGGGGACCGGGTGGTCTGCTGGGTCCGTTCCATCCTCAGGGCCCAGGACAGCCCCTGGCCTGCCAGGGGGACACAGAAAGCCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:131261393|131261567 hsa-miR-637 0 1 1
chr9:131261393|131261567 hsa-miR-922 0 0 1
chr9:131261393|131261567 hsa-miR-1208 0 0 1
chr9:131261393|131261567 hsa-miR-1291 0 1 1
chr9:131261393|131261567 hsa-miR-1324 0 1 1
chr9:131261393|131261567 hsa-miR-296-5p 0 0 1
chr9:131261393|131261567 hsa-miR-486-3p 0 1 1
chr9:131261393|131261567 hsa-miR-331-3p 0 0 1
chr9:131261393|131261567 hsa-miR-1207-5p 0 1 1
chr9:131261393|131261567 hsa-miR-125a-5p 0 0 1
chr9:131261393|131261567 hsa-miR-125b 0 0 1
chr9:131261393|131261567 hsa-miR-1185 0 0 1
chr9:131261393|131261567 hsa-miR-4281 1 0 0
chr9:131261393|131261567 hsa-miR-4741 0 1 0
chr9:131261393|131261567 hsa-miR-7150 0 1 0
chr9:131261393|131261567 hsa-miR-8073 0 1 0
chr9:131261393|131261567 hsa-miR-8089 1 0 0
chr9:131261393|131261567 hsa-miR-1972 0 1 0
chr9:131261393|131261567 hsa-miR-6721-5p 0 1 0
chr9:131261393|131261567 hsa-miR-3605-5p 0 1 0
chr9:131261393|131261567 hsa-miR-1292-5p 0 1 0
chr9:131261393|131261567 hsa-miR-185-3p 0 1 0
chr9:131261393|131261567 hsa-miR-6732-5p 0 1 0
chr9:131261393|131261567 hsa-miR-6798-5p 1 1 0
chr9:131261393|131261567 hsa-miR-939-3p 0 1 0
chr9:131261393|131261567 hsa-miR-6789-5p 0 1 0
chr9:131261393|131261567 hsa-miR-3158-3p 0 1 0
chr9:131261393|131261567 hsa-miR-6801-5p 0 1 0
chr9:131261393|131261567 hsa-miR-3160-5p 0 1 0
chr9:131261393|131261567 hsa-miR-4645-3p 0 1 0
chr9:131261393|131261567 hsa-miR-4763-3p 0 1 0
chr9:131261393|131261567 hsa-miR-6803-5p 1 1 0
chr9:131261393|131261567 hsa-miR-6813-5p 0 1 0
chr9:131261393|131261567 hsa-miR-6722-3p 0 1 0
chr9:131261393|131261567 hsa-miR-328-5p 1 0 0
chr9:131261393|131261567 hsa-miR-4726-5p 0 1 0
chr9:131261393|131261567 hsa-miR-6777-5p 1 0 0
chr9:131261393|131261567 hsa-miR-6848-5p 0 1 0
chr9:131261393|131261567 hsa-miR-6773-5p 0 1 0
chr9:131261393|131261567 hsa-miR-6724-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr9:131261393|131261567
ORF Type ORF1
Protein Length 56
Nucleotide Length 168
Protein Sequence MSEGYDCNSSSDDSDSELLSDPLPPERQRGPGGLLGPFHPQGPGQPLACQGDTESP
Nucleotide Sequence CTGTCTGAGGGTTATGATTGTAACAGCAGCAGTGATGACAGTGACTCCGAGCTACTGTCTGACCCCCTGCCCCCAGAACGTCAAAGGGGACCGGGTGGTCTGCTGGGTCCGTTCCATCCTCAGGGCCCAGGACAGCCCCTGGCCTGCCAGGGGGACACAGAAAGCCCT

CircID chr9:131261393|131261567
ORF Type ORF2
Protein Length 55
Nucleotide Length 165
Protein Sequence MRVMIVTAAVMTVTPSYCLTPCPQNVKGDRVVCWVRSILRAQDSPWPARGTQKAL
Nucleotide Sequence CTGAGGGTTATGATTGTAACAGCAGCAGTGATGACAGTGACTCCGAGCTACTGTCTGACCCCCTGCCCCCAGAACGTCAAAGGGGACCGGGTGGTCTGCTGGGTCCGTTCCATCCTCAGGGCCCAGGACAGCCCCTGGCCTGCCAGGGGGACACAGAAAGCCCTC

CircID chr9:131261393|131261567
ORF Type ORF3
Protein Length 55
Nucleotide Length 165
Protein Sequence MCPPGRPGAVLGPEDGTDPADHPVPFDVLGAGGQTVARSHCHHCCCYNHNPQTEE
Nucleotide Sequence CTGTGTCCCCCTGGCAGGCCAGGGGCTGTCCTGGGCCCTGAGGATGGAACGGACCCAGCAGACCACCCGGTCCCCTTTGACGTTCTGGGGGCAGGGGGTCAGACAGTAGCTCGGAGTCACTGTCATCACTGCTGCTGTTACAATCATAACCCTCAGACAGAAGAA

CircID chr9:131261393|131261567
ORF Type ORF4
Protein Length 32
Nucleotide Length 99
Protein Sequence MAGQGLSWALRMERTQQTTRSPLTFWGQGVRQ
Nucleotide Sequence CTGGCAGGCCAGGGGCTGTCCTGGGCCCTGAGGATGGAACGGACCCAGCAGACCACCCGGTCCCCTTTGACGTTCTGGGGGCAGGGGGTCAGACAGTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites