CircRNA Information

General Information
circRNA Basic Information
CircID chr9:131276173|131276364
Strand -
CircType exon
Host Gene ENSG00000126882.11;
Algorism CIRI2;
Sequence CAGGCATTGAAAGGACAGAGGCTGCAGGACCCAGTACAGACGGCGCTGCTCTCCAATCTCAACTCTCAAGACCGATATCCATAGGATAGAAAACTCACTGAGTAGACTGGGGTTGCATATATCACTACCGCGGCCTGTTTATAAATAAGGATTCTGCTGCATTTCATGAGCCCTGGGCTCTCTCTTCTTCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:131276173|131276364 hsa-miR-107 0 0 1
chr9:131276173|131276364 hsa-miR-185-5p 0 0 1
chr9:131276173|131276364 hsa-miR-185-3p 0 0 1
chr9:131276173|131276364 hsa-miR-340-5p 0 0 1
chr9:131276173|131276364 hsa-miR-340-3p 0 0 1
chr9:131276173|131276364 hsa-miR-526b-5p 0 0 1
chr9:131276173|131276364 hsa-miR-526b-3p 0 0 1
chr9:131276173|131276364 hsa-miR-503-5p 0 0 1
chr9:131276173|131276364 hsa-miR-503-3p 0 0 1
chr9:131276173|131276364 hsa-miR-510-5p 0 0 1
chr9:131276173|131276364 hsa-miR-510-3p 0 0 1
chr9:131276173|131276364 hsa-miR-620 0 0 1
chr9:131276173|131276364 hsa-miR-922 0 0 1
chr9:131276173|131276364 hsa-miR-934 0 0 1
chr9:131276173|131276364 hsa-miR-1246 0 0 1
chr9:131276173|131276364 hsa-miR-1253 0 1 1
chr9:131276173|131276364 hsa-miR-1270 0 0 1
chr9:131276173|131276364 hsa-miR-512-5p 0 0 1
chr9:131276173|131276364 hsa-miR-1184 0 0 1
chr9:131276173|131276364 hsa-miR-103 0 0 1
chr9:131276173|131276364 hsa-miR-500 0 0 1
chr9:131276173|131276364 hsa-miR-203 0 0 1
chr9:131276173|131276364 hsa-miR-219-1-3p 0 0 1
chr9:131276173|131276364 hsa-miR-1245 0 0 1
chr9:131276173|131276364 hsa-miR-920 1 0 0
chr9:131276173|131276364 hsa-miR-1294 1 0 0
chr9:131276173|131276364 hsa-miR-2278 0 1 0
chr9:131276173|131276364 hsa-miR-3916 0 1 0
chr9:131276173|131276364 hsa-miR-1268b 1 0 0
chr9:131276173|131276364 hsa-miR-4467 1 0 0
chr9:131276173|131276364 hsa-miR-3689e 0 1 0
chr9:131276173|131276364 hsa-miR-3689f 0 1 0
chr9:131276173|131276364 hsa-miR-4518 0 1 0
chr9:131276173|131276364 hsa-miR-4538 1 0 0
chr9:131276173|131276364 hsa-miR-4741 1 0 0
chr9:131276173|131276364 hsa-miR-5186 0 1 0
chr9:131276173|131276364 hsa-miR-6073 0 1 0
chr9:131276173|131276364 hsa-miR-6081 1 0 0
chr9:131276173|131276364 hsa-miR-6086 1 0 0
chr9:131276173|131276364 hsa-miR-6088 1 0 0
chr9:131276173|131276364 hsa-miR-4665-3p 1 0 0
chr9:131276173|131276364 hsa-miR-6857-5p 1 0 0
chr9:131276173|131276364 hsa-miR-219a-1-3p 0 1 0
chr9:131276173|131276364 hsa-miR-6854-5p 0 1 0
chr9:131276173|131276364 hsa-miR-6799-5p 1 0 0
chr9:131276173|131276364 hsa-miR-6089 1 0 0
chr9:131276173|131276364 hsa-miR-6820-5p 1 0 0
chr9:131276173|131276364 hsa-miR-8069 1 0 0
chr9:131276173|131276364 hsa-miR-6882-3p 1 0 0
chr9:131276173|131276364 hsa-miR-5088-5p 0 1 0
chr9:131276173|131276364 hsa-miR-885-3p 1 0 0
chr9:131276173|131276364 hsa-miR-3127-5p 1 1 0
chr9:131276173|131276364 hsa-miR-296-3p 1 0 0
chr9:131276173|131276364 hsa-miR-877-5p 1 0 0
chr9:131276173|131276364 hsa-miR-103a-3p 1 0 0
chr9:131276173|131276364 hsa-miR-3162-5p 1 0 0
chr9:131276173|131276364 hsa-miR-7160-3p 1 0 0
chr9:131276173|131276364 hsa-miR-1250-5p 1 0 0
chr9:131276173|131276364 hsa-miR-214-3p 1 0 0
chr9:131276173|131276364 hsa-miR-5197-3p 0 1 0
chr9:131276173|131276364 hsa-miR-1911-5p 1 0 0
chr9:131276173|131276364 hsa-miR-431-5p 1 0 0
chr9:131276173|131276364 hsa-miR-1343-5p 1 0 0
chr9:131276173|131276364 hsa-miR-6726-5p 1 0 0
chr9:131276173|131276364 hsa-miR-1915-3p 1 0 0
chr9:131276173|131276364 hsa-miR-6836-5p 1 0 0
chr9:131276173|131276364 hsa-miR-4632-5p 1 0 0
chr9:131276173|131276364 hsa-miR-4685-5p 1 1 0
chr9:131276173|131276364 hsa-miR-939-5p 1 0 0
chr9:131276173|131276364 hsa-miR-1266-5p 1 0 0
chr9:131276173|131276364 hsa-miR-6731-5p 1 1 0
chr9:131276173|131276364 hsa-miR-6773-5p 1 0 0
chr9:131276173|131276364 hsa-miR-6877-3p 1 1 0
chr9:131276173|131276364 hsa-miR-6849-5p 1 0 0
chr9:131276173|131276364 hsa-miR-6837-5p 0 1 0
chr9:131276173|131276364 hsa-miR-6819-3p 0 1 0
chr9:131276173|131276364 hsa-miR-6859-5p 0 1 0
chr9:131276173|131276364 hsa-miR-3619-5p 1 0 0
chr9:131276173|131276364 hsa-miR-6764-5p 0 1 0
chr9:131276173|131276364 hsa-miR-6771-3p 0 1 0
chr9:131276173|131276364 hsa-miR-3689a-5p 0 1 0
chr9:131276173|131276364 hsa-miR-3689b-5p 0 1 0
chr9:131276173|131276364 hsa-miR-4536-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr9:131276173|131276364
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MKGQRLQDPVQTALLSNLNSQDRYP
Nucleotide Sequence TTGAAAGGACAGAGGCTGCAGGACCCAGTACAGACGGCGCTGCTCTCCAATCTCAACTCTCAAGACCGATATCCATAG
CircID chr9:131276173|131276364
ORF Type ORF2
Protein Length 33
Nucleotide Length 102
Protein Sequence MKCSRILIYKQAAVVIYATPVYSVSFLSYGYRS
Nucleotide Sequence ATGAAATGCAGCAGAATCCTTATTTATAAACAGGCCGCGGTAGTGATATATGCAACCCCAGTCTACTCAGTGAGTTTTCTATCCTATGGATATCGGTCTTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab