CircRNA Information

General Information
circRNA Basic Information
CircID chr9:131499658|131499827
Strand -
CircType exon
Host Gene ENSG00000130723.16;
Algorism CIRI2;
Sequence CTGCTCTTCACTGTTTCCACCCCACTTGGTGGCCTCCAGGATGGTAGTGGCACCCTCAGAGCCCCATCTTCAGCATGTTCTGAAGCCTCAGAGTGGAAATTCCTGCTAAGGCTCTGTGTGGACGCCTTTCTCCCGTGATCTAAAGGGGACACTGTACTCAAGCTTTTGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:131499658|131499827 hsa-miR-608 0 0 1
chr9:131499658|131499827 hsa-miR-650 0 0 1
chr9:131499658|131499827 hsa-miR-760 0 0 1
chr9:131499658|131499827 hsa-miR-1227-5p 0 0 1
chr9:131499658|131499827 hsa-miR-1227-3p 0 0 1
chr9:131499658|131499827 hsa-miR-485-5p 0 0 1
chr9:131499658|131499827 hsa-miR-342-5p 0 0 1
chr9:131499658|131499827 hsa-miR-3170 0 1 0
chr9:131499658|131499827 hsa-miR-3188 1 0 0
chr9:131499658|131499827 hsa-miR-3909 1 0 0
chr9:131499658|131499827 hsa-miR-3921 0 1 0
chr9:131499658|131499827 hsa-miR-4436a 0 1 0
chr9:131499658|131499827 hsa-miR-2392 0 1 0
chr9:131499658|131499827 hsa-miR-4647 0 1 0
chr9:131499658|131499827 hsa-miR-4651 1 0 0
chr9:131499658|131499827 hsa-miR-4739 1 0 0
chr9:131499658|131499827 hsa-miR-6745 0 1 0
chr9:131499658|131499827 hsa-miR-12119 0 1 0
chr9:131499658|131499827 hsa-miR-4731-5p 1 0 0
chr9:131499658|131499827 hsa-miR-6765-5p 1 0 0
chr9:131499658|131499827 hsa-miR-3692-3p 0 1 0
chr9:131499658|131499827 hsa-miR-6804-5p 0 1 0
chr9:131499658|131499827 hsa-miR-6089 1 0 0
chr9:131499658|131499827 hsa-miR-6746-5p 0 1 0
chr9:131499658|131499827 hsa-miR-6742-5p 0 1 0
chr9:131499658|131499827 hsa-miR-6782-5p 1 0 0
chr9:131499658|131499827 hsa-miR-6774-3p 1 0 0
chr9:131499658|131499827 hsa-miR-5008-5p 1 0 0
chr9:131499658|131499827 hsa-miR-6786-5p 1 0 0
chr9:131499658|131499827 hsa-miR-30c-2-3p 0 1 0
chr9:131499658|131499827 hsa-miR-6878-5p 0 1 0
chr9:131499658|131499827 hsa-miR-1304-5p 0 1 0
chr9:131499658|131499827 hsa-miR-4283 0 1 0
chr9:131499658|131499827 hsa-miR-3675-5p 0 1 0
chr9:131499658|131499827 hsa-miR-6812-5p 1 0 0
chr9:131499658|131499827 hsa-miR-5001-5p 1 0 0
chr9:131499658|131499827 hsa-miR-6819-5p 1 0 0
chr9:131499658|131499827 hsa-miR-3085-5p 1 0 0
chr9:131499658|131499827 hsa-miR-30c-1-3p 0 1 0
chr9:131499658|131499827 hsa-miR-374b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr9:131499658|131499827
ORF Type ORF1
Protein Length 45
Nucleotide Length 138
Protein Sequence LLFTVSTPLGGLQDGSGTLRAPSSACSEASEWKFLLRLCVDAFLP
Nucleotide Sequence CTGCTCTTCACTGTTTCCACCCCACTTGGTGGCCTCCAGGATGGTAGTGGCACCCTCAGAGCCCCATCTTCAGCATGTTCTGAAGCCTCAGAGTGGAAATTCCTGCTAAGGCTCTGTGTGGACGCCTTTCTCCCGTGA

CircID chr9:131499658|131499827
ORF Type ORF2
Protein Length 32
Nucleotide Length 99
Protein Sequence MFPPHLVASRMVVAPSEPHLQHVLKPQSGNSC
Nucleotide Sequence CTGTTTCCACCCCACTTGGTGGCCTCCAGGATGGTAGTGGCACCCTCAGAGCCCCATCTTCAGCATGTTCTGAAGCCTCAGAGTGGAAATTCCTGCTAA

CircID chr9:131499658|131499827
ORF Type ORF3
Protein Length 53
Nucleotide Length 159
Protein Sequence MSTVSPLDHGRKASTQSLSRNFHSEASEHAEDGALRVPLPSWRPPSGVETVKS
Nucleotide Sequence TTGAGTACAGTGTCCCCTTTAGATCACGGGAGAAAGGCGTCCACACAGAGCCTTAGCAGGAATTTCCACTCTGAGGCTTCAGAACATGCTGAAGATGGGGCTCTGAGGGTGCCACTACCATCCTGGAGGCCACCAAGTGGGGTGGAAACAGTGAAGAGC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites