CircRNA Information

General Information
circRNA Basic Information
CircID chr9:132230878|132231178
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CCCCACCTCCTGCAGATGCCCCTCCCTGGTCCGACTCCCCTGGGACCTGAGCTGACCTGGACGAGCAGAGCCCTGGGACAAGCTGGCTGCAGAGGCTGCCCAGAGGGAGGCTGCCCCCATGGTTAGGCTAGGGGGTGGATTCTGCCCCTGGTGGGGGAAGGTCACCCCACTCTTGACTGGCAGGAGAGACTGCTCTCCCAGATCCAGGTGAGAGAAGTGGCGTGGGTGGCAGGAGGAGCAGGGAGCCCACCCAGGGGCCAAGAGACCTGCAAAAAGTCCTGTCCCGTTTTCCAAAGCAGCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:132230878|132231178 hsa-miR-328-5p 0 0 1
chr9:132230878|132231178 hsa-miR-328-3p 0 0 1
chr9:132230878|132231178 hsa-miR-326 0 1 1
chr9:132230878|132231178 hsa-miR-335-5p 0 0 1
chr9:132230878|132231178 hsa-miR-335-3p 0 0 1
chr9:132230878|132231178 hsa-miR-507 0 0 1
chr9:132230878|132231178 hsa-miR-557 0 0 1
chr9:132230878|132231178 hsa-miR-608 0 0 1
chr9:132230878|132231178 hsa-miR-612 1 1 1
chr9:132230878|132231178 hsa-miR-619-5p 0 0 1
chr9:132230878|132231178 hsa-miR-619-3p 0 0 1
chr9:132230878|132231178 hsa-miR-657 0 0 1
chr9:132230878|132231178 hsa-miR-541-5p 0 0 1
chr9:132230878|132231178 hsa-miR-541-3p 0 0 1
chr9:132230878|132231178 hsa-miR-760 1 0 1
chr9:132230878|132231178 hsa-miR-942-5p 0 0 1
chr9:132230878|132231178 hsa-miR-942-3p 0 0 1
chr9:132230878|132231178 hsa-miR-1229-5p 0 0 1
chr9:132230878|132231178 hsa-miR-1229-3p 0 0 1
chr9:132230878|132231178 hsa-miR-1205 0 0 1
chr9:132230878|132231178 hsa-miR-1286 0 0 1
chr9:132230878|132231178 hsa-miR-1293 0 0 1
chr9:132230878|132231178 hsa-miR-1321 0 1 1
chr9:132230878|132231178 hsa-miR-129-5p 0 1 1
chr9:132230878|132231178 hsa-miR-486-3p 0 0 1
chr9:132230878|132231178 hsa-miR-1184 0 1 1
chr9:132230878|132231178 hsa-miR-423-5p 0 0 1
chr9:132230878|132231178 hsa-miR-654-5p 0 0 1
chr9:132230878|132231178 hsa-miR-361-3p 0 0 1
chr9:132230878|132231178 hsa-miR-331-3p 0 1 1
chr9:132230878|132231178 hsa-miR-767-3p 0 0 1
chr9:132230878|132231178 hsa-miR-342-5p 0 0 1
chr9:132230878|132231178 hsa-miR-330-5p 0 1 1
chr9:132230878|132231178 hsa-miR-450b-5p 0 0 1
chr9:132230878|132231178 hsa-miR-642 0 0 1
chr9:132230878|132231178 hsa-miR-1285 0 0 1
chr9:132230878|132231178 hsa-miR-1538 1 0 0
chr9:132230878|132231178 hsa-miR-1976 0 1 0
chr9:132230878|132231178 hsa-miR-2278 0 1 0
chr9:132230878|132231178 hsa-miR-4314 1 0 0
chr9:132230878|132231178 hsa-miR-4268 0 1 0
chr9:132230878|132231178 hsa-miR-4274 0 1 0
chr9:132230878|132231178 hsa-miR-4281 1 0 0
chr9:132230878|132231178 hsa-miR-3661 0 1 0
chr9:132230878|132231178 hsa-miR-4449 1 0 0
chr9:132230878|132231178 hsa-miR-4469 0 1 0
chr9:132230878|132231178 hsa-miR-4488 1 0 0
chr9:132230878|132231178 hsa-miR-4654 1 0 0
chr9:132230878|132231178 hsa-miR-4688 0 1 0
chr9:132230878|132231178 hsa-miR-4734 1 0 0
chr9:132230878|132231178 hsa-miR-4739 0 1 0
chr9:132230878|132231178 hsa-miR-6860 1 1 0
chr9:132230878|132231178 hsa-miR-8085 0 1 0
chr9:132230878|132231178 hsa-miR-9900 0 1 0
chr9:132230878|132231178 hsa-miR-12116 1 0 0
chr9:132230878|132231178 hsa-miR-12125 0 1 0
chr9:132230878|132231178 hsa-miR-12128 0 1 0
chr9:132230878|132231178 hsa-miR-6840-3p 1 0 0
chr9:132230878|132231178 hsa-miR-3194-3p 1 1 0
chr9:132230878|132231178 hsa-miR-6861-5p 1 0 0
chr9:132230878|132231178 hsa-miR-6854-5p 0 1 0
chr9:132230878|132231178 hsa-miR-3692-5p 0 1 0
chr9:132230878|132231178 hsa-miR-6727-5p 1 0 0
chr9:132230878|132231178 hsa-miR-6721-5p 1 1 0
chr9:132230878|132231178 hsa-miR-6868-3p 0 1 0
chr9:132230878|132231178 hsa-miR-6728-3p 0 1 0
chr9:132230878|132231178 hsa-miR-5006-5p 1 0 0
chr9:132230878|132231178 hsa-miR-6882-3p 0 1 0
chr9:132230878|132231178 hsa-miR-6788-3p 1 1 0
chr9:132230878|132231178 hsa-miR-3934-3p 0 1 0
chr9:132230878|132231178 hsa-miR-5088-5p 1 0 0
chr9:132230878|132231178 hsa-miR-6772-3p 0 1 0
chr9:132230878|132231178 hsa-miR-4640-5p 1 0 0
chr9:132230878|132231178 hsa-miR-6753-5p 0 1 0
chr9:132230878|132231178 hsa-miR-30c-2-3p 0 1 0
chr9:132230878|132231178 hsa-miR-7113-3p 0 1 0
chr9:132230878|132231178 hsa-miR-3614-5p 0 1 0
chr9:132230878|132231178 hsa-miR-92b-5p 1 1 0
chr9:132230878|132231178 hsa-miR-4733-3p 0 1 0
chr9:132230878|132231178 hsa-miR-6824-5p 1 1 0
chr9:132230878|132231178 hsa-miR-6742-3p 0 1 0
chr9:132230878|132231178 hsa-miR-4640-3p 0 1 0
chr9:132230878|132231178 hsa-miR-7156-3p 0 1 0
chr9:132230878|132231178 hsa-miR-7106-3p 0 1 0
chr9:132230878|132231178 hsa-miR-1251-3p 1 0 0
chr9:132230878|132231178 hsa-miR-2276-5p 0 1 0
chr9:132230878|132231178 hsa-miR-4632-3p 0 1 0
chr9:132230878|132231178 hsa-miR-4749-3p 1 0 0
chr9:132230878|132231178 hsa-miR-204-5p 0 1 0
chr9:132230878|132231178 hsa-miR-6734-3p 0 1 0
chr9:132230878|132231178 hsa-miR-6761-3p 1 1 0
chr9:132230878|132231178 hsa-miR-10400-5p 1 0 0
chr9:132230878|132231178 hsa-miR-6775-5p 1 0 0
chr9:132230878|132231178 hsa-miR-1343-5p 1 0 0
chr9:132230878|132231178 hsa-miR-6737-5p 0 1 0
chr9:132230878|132231178 hsa-miR-6743-5p 1 1 0
chr9:132230878|132231178 hsa-miR-6752-5p 1 0 0
chr9:132230878|132231178 hsa-miR-6754-5p 0 1 0
chr9:132230878|132231178 hsa-miR-6756-5p 1 0 0
chr9:132230878|132231178 hsa-miR-6763-5p 1 0 0
chr9:132230878|132231178 hsa-miR-1915-3p 1 1 0
chr9:132230878|132231178 hsa-miR-4728-5p 0 1 0
chr9:132230878|132231178 hsa-miR-4649-5p 1 0 0
chr9:132230878|132231178 hsa-miR-4685-5p 1 0 0
chr9:132230878|132231178 hsa-miR-6777-5p 1 0 0
chr9:132230878|132231178 hsa-miR-3187-5p 1 1 0
chr9:132230878|132231178 hsa-miR-939-5p 1 0 0
chr9:132230878|132231178 hsa-miR-30c-1-3p 0 1 0
chr9:132230878|132231178 hsa-miR-6731-5p 0 1 0
chr9:132230878|132231178 hsa-miR-6877-3p 0 1 0
chr9:132230878|132231178 hsa-miR-3184-5p 0 1 0
chr9:132230878|132231178 hsa-miR-10398-5p 0 1 0
chr9:132230878|132231178 hsa-miR-6791-5p 0 1 0
chr9:132230878|132231178 hsa-miR-4722-3p 0 1 0
chr9:132230878|132231178 hsa-miR-6727-3p 0 1 0
chr9:132230878|132231178 hsa-miR-6810-3p 1 1 0
chr9:132230878|132231178 hsa-miR-10400-3p 0 1 0
chr9:132230878|132231178 hsa-miR-6819-3p 0 1 0
chr9:132230878|132231178 hsa-miR-4768-5p 0 1 0
chr9:132230878|132231178 hsa-miR-6848-3p 1 1 0
chr9:132230878|132231178 hsa-miR-6764-5p 1 1 0
chr9:132230878|132231178 hsa-miR-6820-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr9:132230878|132231178
ORF Type ORF1
Protein Length 38
Nucleotide Length 117
Protein Sequence MQMPLPGPTPLGPELTWTSRALGQAGCRGCPEGGCPHG
Nucleotide Sequence CTGCAGATGCCCCTCCCTGGTCCGACTCCCCTGGGACCTGAGCTGACCTGGACGAGCAGAGCCCTGGGACAAGCTGGCTGCAGAGGCTGCCCAGAGGGAGGCTGCCCCCATGGTTAG

CircID chr9:132230878|132231178
ORF Type ORF2
Protein Length 53
Nucleotide Length 159
Protein Sequence MPLVGEGHPTLDWQERLLSQIQVREVAWVAGGAGSPPRGQETCKKSCPVFQSS
Nucleotide Sequence CTGCCCCTGGTGGGGGAAGGTCACCCCACTCTTGACTGGCAGGAGAGACTGCTCTCCCAGATCCAGGTGAGAGAAGTGGCGTGGGTGGCAGGAGGAGCAGGGAGCCCACCCAGGGGCCAAGAGACCTGCAAAAAGTCCTGTCCCGTTTTCCAAAGCAGC

CircID chr9:132230878|132231178
ORF Type ORF3
Protein Length 42
Nucleotide Length 129
Protein Sequence MAAEAAQREAAPMVRLGGGFCPWWGKVTPLLTGRRDCSPRSR
Nucleotide Sequence CTGGCTGCAGAGGCTGCCCAGAGGGAGGCTGCCCCCATGGTTAGGCTAGGGGGTGGATTCTGCCCCTGGTGGGGGAAGGTCACCCCACTCTTGACTGGCAGGAGAGACTGCTCTCCCAGATCCAGGTGA

CircID chr9:132230878|132231178
ORF Type ORF4
Protein Length 41
Nucleotide Length 123
Protein Sequence MAGETALPDPGERSGVGGRRSREPTQGPRDLQKVLSRFPKQ
Nucleotide Sequence CTGGCAGGAGAGACTGCTCTCCCAGATCCAGGTGAGAGAAGTGGCGTGGGTGGCAGGAGGAGCAGGGAGCCCACCCAGGGGCCAAGAGACCTGCAAAAAGTCCTGTCCCGTTTTCCAAAGCAG

CircID chr9:132230878|132231178
ORF Type ORF5
Protein Length 37
Nucleotide Length 114
Protein Sequence MLLLPPTPLLSPGSGRAVSPASQEWGDLPPPGAESTP
Nucleotide Sequence CTGCTCCTCCTGCCACCCACGCCACTTCTCTCACCTGGATCTGGGAGAGCAGTCTCTCCTGCCAGTCAAGAGTGGGGTGACCTTCCCCCACCAGGGGCAGAATCCACCCCCTAG

CircID chr9:132230878|132231178
ORF Type ORF6
Protein Length 34
Nucleotide Length 102
Protein Sequence MGSLCSQLVPGLCSSRSAQVPGESDQGGASAGGG
Nucleotide Sequence CTGGGCAGCCTCTGCAGCCAGCTTGTCCCAGGGCTCTGCTCGTCCAGGTCAGCTCAGGTCCCAGGGGAGTCGGACCAGGGAGGGGCATCTGCAGGAGGTGGG

CircID chr9:132230878|132231178
ORF Type ORF7
Protein Length 98
Nucleotide Length 294
Protein Sequence MENGTGLFAGLLAPGWAPCSSCHPRHFSHLDLGEQSLLPVKSGVTFPHQGQNPPPSLTMGAASLWAASAASLSQGSARPGQLRSQGSRTREGHLQEVG
Nucleotide Sequence TTGGAAAACGGGACAGGACTTTTTGCAGGTCTCTTGGCCCCTGGGTGGGCTCCCTGCTCCTCCTGCCACCCACGCCACTTCTCTCACCTGGATCTGGGAGAGCAGTCTCTCCTGCCAGTCAAGAGTGGGGTGACCTTCCCCCACCAGGGGCAGAATCCACCCCCTAGCCTAACCATGGGGGCAGCCTCCCTCTGGGCAGCCTCTGCAGCCAGCTTGTCCCAGGGCTCTGCTCGTCCAGGTCAGCTCAGGTCCCAGGGGAGTCGGACCAGGGAGGGGCATCTGCAGGAGGTGGGG

CircID chr9:132230878|132231178
ORF Type ORF8
Protein Length 45
Nucleotide Length 138
Protein Sequence LLWKTGQDFLQVSWPLGGLPAPPATHATSLTWIWESSLSCQSRVG
Nucleotide Sequence CTGCTTTGGAAAACGGGACAGGACTTTTTGCAGGTCTCTTGGCCCCTGGGTGGGCTCCCTGCTCCTCCTGCCACCCACGCCACTTCTCTCACCTGGATCTGGGAGAGCAGTCTCTCCTGCCAGTCAAGAGTGGGGTGA

CircID chr9:132230878|132231178
ORF Type ORF9
Protein Length 30
Nucleotide Length 90
Protein Sequence MQPACPRALLVQVSSGPRGVGPGRGICRRW
Nucleotide Sequence CTGCAGCCAGCTTGTCCCAGGGCTCTGCTCGTCCAGGTCAGCTCAGGTCCCAGGGGAGTCGGACCAGGGAGGGGCATCTGCAGGAGGTGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites