CircRNA Information

General Information
circRNA Basic Information
CircID chr9:132679531|132679689
Strand +
CircType exon
Host Gene ENSG00000125484.10;
Algorism CIRI2;
Sequence TCGCTTCATGTGTTCCCTGGTCAAGTGCATCTCCACAGCTTCGATTTTCCCTTGGATTTCCAGGAGTTTCTCTTCCATTGGCTCACGGCCTCCAGCATCTCCAGTCGTGGGGAGCGAGTCATCAGTGGGCTCCTCTACATCTCCTTCCTTGCTCCTCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:132679531|132679689 hsa-miR-620 0 0 1
chr9:132679531|132679689 hsa-miR-650 0 0 1
chr9:132679531|132679689 hsa-miR-877-5p 0 0 1
chr9:132679531|132679689 hsa-miR-877-3p 0 0 1
chr9:132679531|132679689 hsa-miR-1287-5p 0 0 1
chr9:132679531|132679689 hsa-miR-1287-3p 0 0 1
chr9:132679531|132679689 hsa-miR-1270 1 1 1
chr9:132679531|132679689 hsa-miR-875-3p 0 1 1
chr9:132679531|132679689 hsa-miR-7 0 0 1
chr9:132679531|132679689 hsa-miR-765 1 1 0
chr9:132679531|132679689 hsa-miR-920 1 0 0
chr9:132679531|132679689 hsa-miR-3125 1 0 0
chr9:132679531|132679689 hsa-miR-3139 0 1 0
chr9:132679531|132679689 hsa-miR-3154 1 0 0
chr9:132679531|132679689 hsa-miR-4325 0 1 0
chr9:132679531|132679689 hsa-miR-3612 1 0 0
chr9:132679531|132679689 hsa-miR-3652 1 0 0
chr9:132679531|132679689 hsa-miR-3916 1 0 0
chr9:132679531|132679689 hsa-miR-4443 0 1 0
chr9:132679531|132679689 hsa-miR-4450 1 0 0
chr9:132679531|132679689 hsa-miR-3135b 1 1 0
chr9:132679531|132679689 hsa-miR-4476 0 1 0
chr9:132679531|132679689 hsa-miR-4533 0 1 0
chr9:132679531|132679689 hsa-miR-4683 1 0 0
chr9:132679531|132679689 hsa-miR-4688 1 0 0
chr9:132679531|132679689 hsa-miR-4689 1 0 0
chr9:132679531|132679689 hsa-miR-4739 1 1 0
chr9:132679531|132679689 hsa-miR-4784 1 0 0
chr9:132679531|132679689 hsa-miR-6088 1 0 0
chr9:132679531|132679689 hsa-miR-7974 1 0 0
chr9:132679531|132679689 hsa-miR-12115 1 0 0
chr9:132679531|132679689 hsa-miR-12128 0 1 0
chr9:132679531|132679689 hsa-miR-128-1-5p 1 0 0
chr9:132679531|132679689 hsa-miR-4731-5p 1 0 0
chr9:132679531|132679689 hsa-miR-6809-5p 1 0 0
chr9:132679531|132679689 hsa-miR-6825-5p 1 0 0
chr9:132679531|132679689 hsa-miR-4708-5p 1 0 0
chr9:132679531|132679689 hsa-miR-6799-5p 1 0 0
chr9:132679531|132679689 hsa-miR-6510-5p 1 1 0
chr9:132679531|132679689 hsa-miR-6089 1 0 0
chr9:132679531|132679689 hsa-miR-6807-5p 1 1 0
chr9:132679531|132679689 hsa-miR-6746-5p 1 0 0
chr9:132679531|132679689 hsa-miR-4722-5p 1 0 0
chr9:132679531|132679689 hsa-miR-505-5p 1 0 0
chr9:132679531|132679689 hsa-miR-3928-3p 0 1 0
chr9:132679531|132679689 hsa-miR-6760-5p 1 0 0
chr9:132679531|132679689 hsa-miR-6888-5p 0 1 0
chr9:132679531|132679689 hsa-miR-5008-5p 1 0 0
chr9:132679531|132679689 hsa-miR-5006-5p 1 0 0
chr9:132679531|132679689 hsa-miR-4640-5p 1 0 0
chr9:132679531|132679689 hsa-miR-6830-5p 1 1 0
chr9:132679531|132679689 hsa-miR-6878-5p 1 0 0
chr9:132679531|132679689 hsa-miR-423-5p 1 1 0
chr9:132679531|132679689 hsa-miR-7846-3p 1 0 0
chr9:132679531|132679689 hsa-miR-1250-5p 1 0 0
chr9:132679531|132679689 hsa-miR-6814-5p 1 0 0
chr9:132679531|132679689 hsa-miR-7113-5p 0 1 0
chr9:132679531|132679689 hsa-miR-3670 0 1 0
chr9:132679531|132679689 hsa-miR-5580-3p 0 1 0
chr9:132679531|132679689 hsa-miR-1233-5p 1 0 0
chr9:132679531|132679689 hsa-miR-1343-5p 1 0 0
chr9:132679531|132679689 hsa-miR-6743-5p 1 0 0
chr9:132679531|132679689 hsa-miR-6851-5p 1 1 0
chr9:132679531|132679689 hsa-miR-11181-3p 1 0 0
chr9:132679531|132679689 hsa-miR-1249-5p 1 0 0
chr9:132679531|132679689 hsa-miR-6797-5p 1 0 0
chr9:132679531|132679689 hsa-miR-5196-5p 1 0 0
chr9:132679531|132679689 hsa-miR-4632-5p 1 0 0
chr9:132679531|132679689 hsa-miR-6738-5p 1 0 0
chr9:132679531|132679689 hsa-miR-939-5p 1 0 0
chr9:132679531|132679689 hsa-miR-6876-5p 1 1 0
chr9:132679531|132679689 hsa-miR-6891-5p 1 1 0
chr9:132679531|132679689 hsa-miR-4716-3p 1 0 0
chr9:132679531|132679689 hsa-miR-6750-5p 0 1 0
chr9:132679531|132679689 hsa-miR-3184-5p 1 0 0
chr9:132679531|132679689 hsa-miR-3689d 1 0 0
chr9:132679531|132679689 hsa-miR-6822-5p 0 1 0
chr9:132679531|132679689 hsa-miR-4756-5p 1 0 0
chr9:132679531|132679689 hsa-miR-6859-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr9:132679531|132679689
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MDFQEFLFHWLTASSISSRGERVISGLLYISFLAPL
Nucleotide Sequence TTGGATTTCCAGGAGTTTCTCTTCCATTGGCTCACGGCCTCCAGCATCTCCAGTCGTGGGGAGCGAGTCATCAGTGGGCTCCTCTACATCTCCTTCCTTGCTCCTCTC
CircID chr9:132679531|132679689
ORF Type ORF2
Protein Length 50
Nucleotide Length 150
Protein Sequence MCSLVKCISTASIFPWISRSFSSIGSRPPASPVVGSESSVGSSTSPSLLL
Nucleotide Sequence ATGTGTTCCCTGGTCAAGTGCATCTCCACAGCTTCGATTTTCCCTTGGATTTCCAGGAGTTTCTCTTCCATTGGCTCACGGCCTCCAGCATCTCCAGTCGTGGGGAGCGAGTCATCAGTGGGCTCCTCTACATCTCCTTCCTTGCTCCTC
CircID chr9:132679531|132679689
ORF Type ORF3
Protein Length 27
Nucleotide Length 81
Protein Sequence MAHGLQHLQSWGASHQWAPLHLLPCSS
Nucleotide Sequence TTGGCTCACGGCCTCCAGCATCTCCAGTCGTGGGGAGCGAGTCATCAGTGGGCTCCTCTACATCTCCTTCCTTGCTCCTCT
CircID chr9:132679531|132679689
ORF Type ORF4
Protein Length 26
Nucleotide Length 78
Protein Sequence MEEKLLEIQGKIEAVEMHLTREHMKR
Nucleotide Sequence ATGGAAGAGAAACTCCTGGAAATCCAAGGGAAAATCGAAGCTGTGGAGATGCACTTGACCAGGGAACACATGAAGCGA
CircID chr9:132679531|132679689
ORF Type ORF5
Protein Length 34
Nucleotide Length 105
Protein Sequence MMTRSPRLEMLEAVSQWKRNSWKSKGKSKLWRCT
Nucleotide Sequence CTGATGACTCGCTCCCCACGACTGGAGATGCTGGAGGCCGTGAGCCAATGGAAGAGAAACTCCTGGAAATCCAAGGGAAAATCGAAGCTGTGGAGATGCACTTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab