CircRNA Information

General Information
circRNA Basic Information
CircID chr9:133470410|133470530
Strand +
CircType exon
Host Gene ENSG00000160325.13;
Algorism CIRI2;
Sequence GCCCACTCTCGCCTGTGGCCCAGGGCCTTCCACCTCTGCATCCAGCCATGCACCCACCATTTCCCCACAGGGTACAGGGGCAGCCTTCCTTGATCCACAGCCAACCCTTCTCCTGCTGTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:133470410|133470530 hsa-miR-10a-5p 0 0 1
chr9:133470410|133470530 hsa-miR-10a-3p 0 0 1
chr9:133470410|133470530 hsa-miR-10b-5p 0 0 1
chr9:133470410|133470530 hsa-miR-10b-3p 0 0 1
chr9:133470410|133470530 hsa-miR-214-5p 0 0 1
chr9:133470410|133470530 hsa-miR-214-3p 0 0 1
chr9:133470410|133470530 hsa-miR-522-5p 0 0 1
chr9:133470410|133470530 hsa-miR-522-3p 0 0 1
chr9:133470410|133470530 hsa-miR-647 0 0 1
chr9:133470410|133470530 hsa-miR-541-5p 0 0 1
chr9:133470410|133470530 hsa-miR-541-3p 0 0 1
chr9:133470410|133470530 hsa-miR-1287-5p 0 0 1
chr9:133470410|133470530 hsa-miR-1287-3p 0 0 1
chr9:133470410|133470530 hsa-miR-1291 0 1 1
chr9:133470410|133470530 hsa-miR-486-5p 0 0 1
chr9:133470410|133470530 hsa-miR-491-5p 0 0 1
chr9:133470410|133470530 hsa-miR-296-3p 1 1 1
chr9:133470410|133470530 hsa-miR-654-5p 0 0 1
chr9:133470410|133470530 hsa-miR-324-3p 0 0 1
chr9:133470410|133470530 hsa-miR-765 1 0 0
chr9:133470410|133470530 hsa-miR-760 1 0 0
chr9:133470410|133470530 hsa-miR-2110 0 1 0
chr9:133470410|133470530 hsa-miR-3154 1 1 0
chr9:133470410|133470530 hsa-miR-4257 0 1 0
chr9:133470410|133470530 hsa-miR-4271 1 0 0
chr9:133470410|133470530 hsa-miR-4292 0 1 0
chr9:133470410|133470530 hsa-miR-3652 1 1 0
chr9:133470410|133470530 hsa-miR-1268b 1 0 0
chr9:133470410|133470530 hsa-miR-4498 1 0 0
chr9:133470410|133470530 hsa-miR-4507 1 0 0
chr9:133470410|133470530 hsa-miR-4516 1 1 0
chr9:133470410|133470530 hsa-miR-4651 1 0 0
chr9:133470410|133470530 hsa-miR-4689 1 0 0
chr9:133470410|133470530 hsa-miR-4752 0 1 0
chr9:133470410|133470530 hsa-miR-5093 1 0 0
chr9:133470410|133470530 hsa-miR-5194 1 0 0
chr9:133470410|133470530 hsa-miR-5703 1 0 0
chr9:133470410|133470530 hsa-miR-5787 1 0 0
chr9:133470410|133470530 hsa-miR-6134 0 1 0
chr9:133470410|133470530 hsa-miR-6165 1 1 0
chr9:133470410|133470530 hsa-miR-7974 1 0 0
chr9:133470410|133470530 hsa-miR-4433b-3p 1 0 0
chr9:133470410|133470530 hsa-miR-6734-5p 1 0 0
chr9:133470410|133470530 hsa-miR-4433a-3p 1 0 0
chr9:133470410|133470530 hsa-miR-3150a-3p 1 0 0
chr9:133470410|133470530 hsa-miR-7106-5p 1 0 0
chr9:133470410|133470530 hsa-miR-6894-5p 1 0 0
chr9:133470410|133470530 hsa-miR-6857-5p 1 0 0
chr9:133470410|133470530 hsa-miR-6510-5p 1 0 0
chr9:133470410|133470530 hsa-miR-7114-5p 0 1 0
chr9:133470410|133470530 hsa-miR-6880-5p 1 0 0
chr9:133470410|133470530 hsa-miR-6746-5p 1 1 0
chr9:133470410|133470530 hsa-miR-4722-5p 1 0 0
chr9:133470410|133470530 hsa-miR-6741-5p 1 1 0
chr9:133470410|133470530 hsa-miR-6842-3p 1 0 0
chr9:133470410|133470530 hsa-miR-8069 1 0 0
chr9:133470410|133470530 hsa-miR-6776-5p 0 1 0
chr9:133470410|133470530 hsa-miR-6742-5p 1 0 0
chr9:133470410|133470530 hsa-miR-6716-5p 1 0 0
chr9:133470410|133470530 hsa-miR-3151-5p 1 0 0
chr9:133470410|133470530 hsa-miR-6748-5p 1 1 0
chr9:133470410|133470530 hsa-miR-6772-5p 1 1 0
chr9:133470410|133470530 hsa-miR-6793-5p 1 0 0
chr9:133470410|133470530 hsa-miR-6796-5p 1 0 0
chr9:133470410|133470530 hsa-miR-185-3p 1 0 0
chr9:133470410|133470530 hsa-miR-6732-5p 1 0 0
chr9:133470410|133470530 hsa-miR-3190-3p 1 1 0
chr9:133470410|133470530 hsa-miR-6798-5p 1 0 0
chr9:133470410|133470530 hsa-miR-6760-5p 1 0 0
chr9:133470410|133470530 hsa-miR-2467-3p 0 1 0
chr9:133470410|133470530 hsa-miR-6782-5p 1 0 0
chr9:133470410|133470530 hsa-miR-6821-5p 1 0 0
chr9:133470410|133470530 hsa-miR-6810-5p 1 0 0
chr9:133470410|133470530 hsa-miR-5008-5p 1 1 0
chr9:133470410|133470530 hsa-miR-6772-3p 0 1 0
chr9:133470410|133470530 hsa-miR-4690-5p 1 1 0
chr9:133470410|133470530 hsa-miR-6823-5p 1 0 0
chr9:133470410|133470530 hsa-miR-6830-5p 0 1 0
chr9:133470410|133470530 hsa-miR-6886-5p 0 1 0
chr9:133470410|133470530 hsa-miR-4715-5p 1 0 0
chr9:133470410|133470530 hsa-miR-5011-3p 0 1 0
chr9:133470410|133470530 hsa-miR-1233-5p 1 1 0
chr9:133470410|133470530 hsa-miR-4763-3p 1 0 0
chr9:133470410|133470530 hsa-miR-6769b-5p 1 1 0
chr9:133470410|133470530 hsa-miR-6812-5p 1 0 0
chr9:133470410|133470530 hsa-miR-6870-5p 1 0 0
chr9:133470410|133470530 hsa-miR-5001-5p 1 1 0
chr9:133470410|133470530 hsa-miR-6737-5p 1 0 0
chr9:133470410|133470530 hsa-miR-6743-5p 1 0 0
chr9:133470410|133470530 hsa-miR-6769a-5p 1 1 0
chr9:133470410|133470530 hsa-miR-6819-5p 1 0 0
chr9:133470410|133470530 hsa-miR-10401-5p 1 0 0
chr9:133470410|133470530 hsa-miR-1249-5p 1 0 0
chr9:133470410|133470530 hsa-miR-6722-3p 1 1 0
chr9:133470410|133470530 hsa-miR-6763-5p 1 0 0
chr9:133470410|133470530 hsa-miR-6879-5p 1 0 0
chr9:133470410|133470530 hsa-miR-5189-5p 1 0 0
chr9:133470410|133470530 hsa-miR-5196-5p 1 0 0
chr9:133470410|133470530 hsa-miR-6780b-5p 1 1 0
chr9:133470410|133470530 hsa-miR-6836-5p 1 0 0
chr9:133470410|133470530 hsa-miR-1909-3p 1 0 0
chr9:133470410|133470530 hsa-miR-4701-3p 1 0 0
chr9:133470410|133470530 hsa-miR-6858-5p 1 0 0
chr9:133470410|133470530 hsa-miR-939-5p 1 0 0
chr9:133470410|133470530 hsa-miR-3940-5p 1 0 0
chr9:133470410|133470530 hsa-miR-6758-5p 1 0 0
chr9:133470410|133470530 hsa-miR-1914-3p 1 0 0
chr9:133470410|133470530 hsa-miR-7151-3p 0 1 0
chr9:133470410|133470530 hsa-miR-4747-5p 1 0 0
chr9:133470410|133470530 hsa-miR-6724-5p 1 0 0
chr9:133470410|133470530 hsa-miR-6791-5p 1 1 0
chr9:133470410|133470530 hsa-miR-3619-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr9:133470410|133470530
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MWPRAFHLCIQPCTHHFPTGYRGSLP
Nucleotide Sequence CTGTGGCCCAGGGCCTTCCACCTCTGCATCCAGCCATGCACCCACCATTTCCCCACAGGGTACAGGGGCAGCCTTCCTTGA
CircID chr9:133470410|133470530
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MHPAMHPPFPHRVQGQPSLIHSQPFSCC
Nucleotide Sequence CTGCATCCAGCCATGCACCCACCATTTCCCCACAGGGTACAGGGGCAGCCTTCCTTGATCCACAGCCAACCCTTCTCCTGCTGT
CircID chr9:133470410|133470530
ORF Type ORF3
Protein Length 33
Nucleotide Length 99
Protein Sequence MWIKEGCPCTLWGNGGCMAGCRGGRPWATGESG
Nucleotide Sequence CTGTGGATCAAGGAAGGCTGCCCCTGTACCCTGTGGGGAAATGGTGGGTGCATGGCTGGATGCAGAGGTGGAAGGCCCTGGGCCACAGGCGAGAGTGGG
CircID chr9:133470410|133470530
ORF Type ORF4
Protein Length 34
Nucleotide Length 102
Protein Sequence MAVDQGRLPLYPVGKWWVHGWMQRWKALGHRREW
Nucleotide Sequence TTGGCTGTGGATCAAGGAAGGCTGCCCCTGTACCCTGTGGGGAAATGGTGGGTGCATGGCTGGATGCAGAGGTGGAAGGCCCTGGGCCACAGGCGAGAGTGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab