CircRNA Information

General Information
circRNA Basic Information
CircID chr9:134026507|134026765
Strand -
CircType exon
Host Gene ENSG00000235106.7;
Algorism CIRI2;
Sequence CTGTGTGCGGTCCCCTGAATGGGTCTCAGGTGTCTTCAGAATGGTGAGGCCGCCTCATTTCCTCACCACACAACCCTCCTGAGGACGTTGCCTGCAAATGGGCGGAATTCCTAATTTCTACCATTCAGTTAAACGAGGGATCCTTAAGCCCCAAAGCTGGGAAAGCTGTCCGTTAATTTAGTGCGCGTGGGCCGTCTCAGAACAGCAGGGTTCCCAGGAGTCCAGCGGGACGGGGGAGGGGATGAGTGGCCGTGTCCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:134026507|134026765 hsa-miR-191-5p 0 0 1
chr9:134026507|134026765 hsa-miR-191-3p 0 0 1
chr9:134026507|134026765 hsa-miR-370-5p 0 0 1
chr9:134026507|134026765 hsa-miR-370-3p 0 0 1
chr9:134026507|134026765 hsa-miR-379-5p 0 0 1
chr9:134026507|134026765 hsa-miR-379-3p 0 0 1
chr9:134026507|134026765 hsa-miR-422a 0 0 1
chr9:134026507|134026765 hsa-miR-660-5p 0 0 1
chr9:134026507|134026765 hsa-miR-660-3p 0 0 1
chr9:134026507|134026765 hsa-miR-1247-5p 0 0 1
chr9:134026507|134026765 hsa-miR-1247-3p 0 0 1
chr9:134026507|134026765 hsa-miR-1292-5p 0 0 1
chr9:134026507|134026765 hsa-miR-1292-3p 0 0 1
chr9:134026507|134026765 hsa-miR-139-3p 0 0 1
chr9:134026507|134026765 hsa-miR-769-5p 0 0 1
chr9:134026507|134026765 hsa-miR-296-3p 0 1 1
chr9:134026507|134026765 hsa-miR-378 0 0 1
chr9:134026507|134026765 hsa-miR-644 0 0 1
chr9:134026507|134026765 hsa-miR-147 0 0 1
chr9:134026507|134026765 hsa-miR-662 1 0 0
chr9:134026507|134026765 hsa-miR-1538 1 0 0
chr9:134026507|134026765 hsa-miR-4324 0 1 0
chr9:134026507|134026765 hsa-miR-4260 1 1 0
chr9:134026507|134026765 hsa-miR-4329 0 1 0
chr9:134026507|134026765 hsa-miR-3915 0 1 0
chr9:134026507|134026765 hsa-miR-378f 0 1 0
chr9:134026507|134026765 hsa-miR-4710 0 1 0
chr9:134026507|134026765 hsa-miR-4785 1 0 0
chr9:134026507|134026765 hsa-miR-5093 0 1 0
chr9:134026507|134026765 hsa-miR-5572 1 0 0
chr9:134026507|134026765 hsa-miR-6075 1 1 0
chr9:134026507|134026765 hsa-miR-4665-3p 1 0 0
chr9:134026507|134026765 hsa-miR-145-3p 0 1 0
chr9:134026507|134026765 hsa-miR-185-3p 1 0 0
chr9:134026507|134026765 hsa-miR-6827-5p 1 0 0
chr9:134026507|134026765 hsa-miR-6770-5p 1 0 0
chr9:134026507|134026765 hsa-miR-3667-5p 0 1 0
chr9:134026507|134026765 hsa-miR-6821-5p 1 0 0
chr9:134026507|134026765 hsa-miR-7855-5p 0 1 0
chr9:134026507|134026765 hsa-miR-5008-5p 1 0 0
chr9:134026507|134026765 hsa-miR-6788-3p 1 0 0
chr9:134026507|134026765 hsa-miR-1343-3p 0 1 0
chr9:134026507|134026765 hsa-miR-6786-5p 1 0 0
chr9:134026507|134026765 hsa-miR-939-3p 1 0 0
chr9:134026507|134026765 hsa-miR-6772-3p 1 0 0
chr9:134026507|134026765 hsa-miR-1908-3p 1 0 0
chr9:134026507|134026765 hsa-miR-92b-5p 1 0 0
chr9:134026507|134026765 hsa-miR-7111-3p 0 1 0
chr9:134026507|134026765 hsa-miR-5196-3p 0 1 0
chr9:134026507|134026765 hsa-miR-339-5p 0 1 0
chr9:134026507|134026765 hsa-miR-6870-3p 0 1 0
chr9:134026507|134026765 hsa-miR-6743-3p 0 1 0
chr9:134026507|134026765 hsa-miR-6887-3p 0 1 0
chr9:134026507|134026765 hsa-miR-6869-3p 1 0 0
chr9:134026507|134026765 hsa-miR-6758-3p 0 1 0
chr9:134026507|134026765 hsa-miR-605-3p 0 1 0
chr9:134026507|134026765 hsa-miR-6826-3p 0 1 0
chr9:134026507|134026765 hsa-miR-6795-3p 1 0 0
chr9:134026507|134026765 hsa-miR-6729-3p 0 1 0
chr9:134026507|134026765 hsa-miR-6756-5p 1 0 0
chr9:134026507|134026765 hsa-miR-10401-5p 1 0 0
chr9:134026507|134026765 hsa-miR-1249-5p 1 0 0
chr9:134026507|134026765 hsa-miR-6866-3p 0 1 0
chr9:134026507|134026765 hsa-miR-4728-5p 1 0 0
chr9:134026507|134026765 hsa-miR-6883-5p 1 0 0
chr9:134026507|134026765 hsa-miR-10392-3p 1 0 0
chr9:134026507|134026765 hsa-miR-3622a-3p 0 1 0
chr9:134026507|134026765 hsa-miR-4701-5p 1 1 0
chr9:134026507|134026765 hsa-miR-6783-3p 0 1 0
chr9:134026507|134026765 hsa-miR-3622b-3p 0 1 0
chr9:134026507|134026765 hsa-miR-6811-5p 0 1 0
chr9:134026507|134026765 hsa-miR-3136-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr9:134026507|134026765
ORF Type ORF1
Protein Length 31
Nucleotide Length 96
Protein Sequence MGLRCLQNGEAASFPHHTTLLRTLPANGRNS
Nucleotide Sequence ATGGGTCTCAGGTGTCTTCAGAATGGTGAGGCCGCCTCATTTCCTCACCACACAACCCTCCTGAGGACGTTGCCTGCAAATGGGCGGAATTCCTAA
CircID chr9:134026507|134026765
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MGKLSVNLVRVGRLRTAGFPGVQRDGGGDEWPCP
Nucleotide Sequence CTGGGAAAGCTGTCCGTTAATTTAGTGCGCGTGGGCCGTCTCAGAACAGCAGGGTTCCCAGGAGTCCAGCGGGACGGGGGAGGGGATGAGTGGCCGTGTCCC
CircID chr9:134026507|134026765
ORF Type ORF3
Protein Length 29
Nucleotide Length 90
Protein Sequence MQMGGIPNFYHSVKRGILKPQSWESCPLI
Nucleotide Sequence CTGCAAATGGGCGGAATTCCTAATTTCTACCATTCAGTTAAACGAGGGATCCTTAAGCCCCAAAGCTGGGAAAGCTGTCCGTTAATTTAG
CircID chr9:134026507|134026765
ORF Type ORF4
Protein Length 32
Nucleotide Length 99
Protein Sequence MVEIRNSAHLQATSSGGLCGEEMRRPHHSEDT
Nucleotide Sequence ATGGTAGAAATTAGGAATTCCGCCCATTTGCAGGCAACGTCCTCAGGAGGGTTGTGTGGTGAGGAAATGAGGCGGCCTCACCATTCTGAAGACACCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab