CircRNA Information

General Information
circRNA Basic Information
CircID chr9:134158284|134158486
Strand +
CircType exon
Host Gene ENSG00000196363.8;
Algorism CIRI2;
Sequence TGGCGGGAATGGAGGAGTCAGGGCCCTGGGCCAGGGCATCTACGCAGCAGAGAATGGGGGCGGCCGGCGTGGGCCAAAGGGGAGGCCAGCTGGCGGGGCCACGGTGGCGGTGACAGGCCACAGCGTGCACTGGGTCATGGAATATCAAAAAGATACAGAACGTTTACTGAAAAAACACAACGCATGTTAAATTGAACTTCACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:134158284|134158486 hsa-miR-148a-5p 0 0 1
chr9:134158284|134158486 hsa-miR-148a-3p 0 0 1
chr9:134158284|134158486 hsa-miR-152-5p 0 0 1
chr9:134158284|134158486 hsa-miR-152-3p 0 0 1
chr9:134158284|134158486 hsa-miR-136-5p 0 0 1
chr9:134158284|134158486 hsa-miR-136-3p 0 0 1
chr9:134158284|134158486 hsa-miR-328-5p 0 0 1
chr9:134158284|134158486 hsa-miR-328-3p 0 0 1
chr9:134158284|134158486 hsa-miR-148b-5p 0 0 1
chr9:134158284|134158486 hsa-miR-148b-3p 0 0 1
chr9:134158284|134158486 hsa-miR-345-5p 0 0 1
chr9:134158284|134158486 hsa-miR-345-3p 0 0 1
chr9:134158284|134158486 hsa-miR-874-5p 0 0 1
chr9:134158284|134158486 hsa-miR-874-3p 0 0 1
chr9:134158284|134158486 hsa-miR-663b 0 1 1
chr9:134158284|134158486 hsa-miR-1204 0 0 1
chr9:134158284|134158486 hsa-miR-1291 0 1 1
chr9:134158284|134158486 hsa-miR-1825 0 0 1
chr9:134158284|134158486 hsa-miR-146b-3p 0 0 1
chr9:134158284|134158486 hsa-miR-1207-3p 0 1 1
chr9:134158284|134158486 hsa-miR-326 1 0 0
chr9:134158284|134158486 hsa-miR-1538 1 0 0
chr9:134158284|134158486 hsa-miR-1913 1 1 0
chr9:134158284|134158486 hsa-miR-4313 1 0 0
chr9:134158284|134158486 hsa-miR-4258 0 1 0
chr9:134158284|134158486 hsa-miR-4292 1 0 0
chr9:134158284|134158486 hsa-miR-3943 1 0 0
chr9:134158284|134158486 hsa-miR-4526 1 0 0
chr9:134158284|134158486 hsa-miR-3972 1 0 0
chr9:134158284|134158486 hsa-miR-6084 1 0 0
chr9:134158284|134158486 hsa-miR-4747-3p 1 0 0
chr9:134158284|134158486 hsa-miR-214-5p 0 1 0
chr9:134158284|134158486 hsa-miR-3194-3p 1 0 0
chr9:134158284|134158486 hsa-miR-4665-3p 1 0 0
chr9:134158284|134158486 hsa-miR-6836-3p 1 0 0
chr9:134158284|134158486 hsa-miR-671-5p 1 0 0
chr9:134158284|134158486 hsa-miR-149-5p 0 1 0
chr9:134158284|134158486 hsa-miR-296-5p 1 0 0
chr9:134158284|134158486 hsa-miR-6787-3p 1 0 0
chr9:134158284|134158486 hsa-miR-6735-3p 0 1 0
chr9:134158284|134158486 hsa-miR-939-3p 1 0 0
chr9:134158284|134158486 hsa-miR-1908-3p 1 0 0
chr9:134158284|134158486 hsa-miR-6878-3p 0 1 0
chr9:134158284|134158486 hsa-miR-378a-5p 1 0 0
chr9:134158284|134158486 hsa-miR-3190-5p 1 0 0
chr9:134158284|134158486 hsa-miR-7160-3p 1 1 0
chr9:134158284|134158486 hsa-miR-6743-3p 1 0 0
chr9:134158284|134158486 hsa-miR-4732-3p 0 1 0
chr9:134158284|134158486 hsa-miR-4758-3p 1 0 0
chr9:134158284|134158486 hsa-miR-4632-3p 1 1 0
chr9:134158284|134158486 hsa-miR-1296-5p 1 1 0
chr9:134158284|134158486 hsa-miR-6779-3p 0 1 0
chr9:134158284|134158486 hsa-miR-4685-3p 1 0 0
chr9:134158284|134158486 hsa-miR-6836-5p 1 0 0
chr9:134158284|134158486 hsa-miR-4685-5p 0 1 0
chr9:134158284|134158486 hsa-miR-10396a-3p 1 0 0
chr9:134158284|134158486 hsa-miR-10396b-3p 1 0 0
chr9:134158284|134158486 hsa-miR-6799-3p 1 0 0
chr9:134158284|134158486 hsa-miR-6753-3p 1 1 0
chr9:134158284|134158486 hsa-miR-4722-3p 1 0 0
chr9:134158284|134158486 hsa-miR-10401-3p 1 0 0
chr9:134158284|134158486 hsa-miR-6775-3p 1 1 0
chr9:134158284|134158486 hsa-miR-10392-3p 1 0 0
chr9:134158284|134158486 hsa-miR-3130-5p 0 1 0
chr9:134158284|134158486 hsa-miR-483-3p 0 1 0
chr9:134158284|134158486 hsa-miR-6764-5p 0 1 0
chr9:134158284|134158486 hsa-miR-4482-5p 0 1 0
chr9:134158284|134158486 hsa-miR-3922-3p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr9:134158284|134158486
ORF Type ORF1
Protein Length 54
Nucleotide Length 165
Protein Sequence MGQGIYAAENGGGRRGPKGRPAGGATVAVTGHSVHWVMEYQKDTERLLKKHNAC
Nucleotide Sequence CTGGGCCAGGGCATCTACGCAGCAGAGAATGGGGGCGGCCGGCGTGGGCCAAAGGGGAGGCCAGCTGGCGGGGCCACGGTGGCGGTGACAGGCCACAGCGTGCACTGGGTCATGGAATATCAAAAAGATACAGAACGTTTACTGAAAAAACACAACGCATGTTAA

CircID chr9:134158284|134158486
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MEESGPWARASTQQRMGAAGVGQRGGQLAGPRWR
Nucleotide Sequence ATGGAGGAGTCAGGGCCCTGGGCCAGGGCATCTACGCAGCAGAGAATGGGGGCGGCCGGCGTGGGCCAAAGGGGAGGCCAGCTGGCGGGGCCACGGTGGCGGTGA

CircID chr9:134158284|134158486
ORF Type ORF3
Protein Length 32
Nucleotide Length 99
Protein Sequence MSPPPWPRQLASPLAHAGRPHSLLRRCPGPGP
Nucleotide Sequence CTGTCACCGCCACCGTGGCCCCGCCAGCTGGCCTCCCCTTTGGCCCACGCCGGCCGCCCCCATTCTCTGCTGCGTAGATGCCCTGGCCCAGGGCCCTGA

CircID chr9:134158284|134158486
ORF Type ORF4
Protein Length 49
Nucleotide Length 147
Protein Sequence MIFHDPVHAVACHRHRGPASWPPLWPTPAAPILCCVDALAQGPDSSIPA
Nucleotide Sequence TTGATATTCCATGACCCAGTGCACGCTGTGGCCTGTCACCGCCACCGTGGCCCCGCCAGCTGGCCTCCCCTTTGGCCCACGCCGGCCGCCCCCATTCTCTGCTGCGTAGATGCCCTGGCCCAGGGCCCTGACTCCTCCATTCCCGCC

CircID chr9:134158284|134158486
ORF Type ORF5
Protein Length 32
Nucleotide Length 99
Protein Sequence MTQCTLWPVTATVAPPAGLPFGPRRPPPFSAA
Nucleotide Sequence ATGACCCAGTGCACGCTGTGGCCTGTCACCGCCACCGTGGCCCCGCCAGCTGGCCTCCCCTTTGGCCCACGCCGGCCGCCCCCATTCTCTGCTGCGTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites