CircRNA Information

General Information
circRNA Basic Information
CircID chr9:134842521|134842716
Strand -
CircType exon
Host Gene ENSG00000130635.14;
Algorism CIRI2;
Sequence CTAGCTGCACCCCAGCGCCTGGGCCCGCCCCACGCTCTGTCCACACCCACGCGCCCCGGGAGCGGGGCCATGCCTCCAGCCCCCCAGCTCGCCCGACCCATCCTGTTCGTGAATAGGTCTCAGGGGTTGGGGGAGGGACTGCCAGATTTGGACACTATATTTTTTTCTAAATTCAACTTGAAGATGTGTATTTCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:134842521|134842716 hsa-miR-26b-5p 0 0 1
chr9:134842521|134842716 hsa-miR-26b-3p 0 0 1
chr9:134842521|134842716 hsa-miR-34a-5p 0 0 1
chr9:134842521|134842716 hsa-miR-34a-3p 0 0 1
chr9:134842521|134842716 hsa-miR-449a 0 0 1
chr9:134842521|134842716 hsa-miR-608 1 0 1
chr9:134842521|134842716 hsa-miR-609 0 0 1
chr9:134842521|134842716 hsa-miR-637 1 1 1
chr9:134842521|134842716 hsa-miR-650 0 1 1
chr9:134842521|134842716 hsa-miR-449b-5p 0 0 1
chr9:134842521|134842716 hsa-miR-449b-3p 0 0 1
chr9:134842521|134842716 hsa-miR-1301-5p 0 0 1
chr9:134842521|134842716 hsa-miR-1301-3p 0 0 1
chr9:134842521|134842716 hsa-miR-1297 0 0 1
chr9:134842521|134842716 hsa-miR-769-5p 0 0 1
chr9:134842521|134842716 hsa-miR-361-3p 0 0 1
chr9:134842521|134842716 hsa-miR-342-5p 0 0 1
chr9:134842521|134842716 hsa-miR-125a-5p 0 1 1
chr9:134842521|134842716 hsa-miR-34c-5p 0 0 1
chr9:134842521|134842716 hsa-miR-886-5p 0 0 1
chr9:134842521|134842716 hsa-miR-125b 0 0 1
chr9:134842521|134842716 hsa-miR-26a 0 0 1
chr9:134842521|134842716 hsa-miR-661 1 0 0
chr9:134842521|134842716 hsa-miR-762 1 1 0
chr9:134842521|134842716 hsa-miR-940 1 0 0
chr9:134842521|134842716 hsa-miR-1268a 1 1 0
chr9:134842521|134842716 hsa-miR-1469 1 0 0
chr9:134842521|134842716 hsa-miR-1538 0 1 0
chr9:134842521|134842716 hsa-miR-3138 0 1 0
chr9:134842521|134842716 hsa-miR-3181 1 0 0
chr9:134842521|134842716 hsa-miR-3196 1 1 0
chr9:134842521|134842716 hsa-miR-4322 1 0 0
chr9:134842521|134842716 hsa-miR-4324 0 1 0
chr9:134842521|134842716 hsa-miR-4274 0 1 0
chr9:134842521|134842716 hsa-miR-4281 1 0 0
chr9:134842521|134842716 hsa-miR-4329 0 1 0
chr9:134842521|134842716 hsa-miR-3652 0 1 0
chr9:134842521|134842716 hsa-miR-3911 1 0 0
chr9:134842521|134842716 hsa-miR-1268b 1 1 0
chr9:134842521|134842716 hsa-miR-4443 0 1 0
chr9:134842521|134842716 hsa-miR-4449 1 0 0
chr9:134842521|134842716 hsa-miR-4466 1 0 0
chr9:134842521|134842716 hsa-miR-4488 1 0 0
chr9:134842521|134842716 hsa-miR-4492 0 1 0
chr9:134842521|134842716 hsa-miR-4498 0 1 0
chr9:134842521|134842716 hsa-miR-2392 0 1 0
chr9:134842521|134842716 hsa-miR-4507 1 1 0
chr9:134842521|134842716 hsa-miR-4508 1 0 0
chr9:134842521|134842716 hsa-miR-1587 1 0 0
chr9:134842521|134842716 hsa-miR-4634 1 0 0
chr9:134842521|134842716 hsa-miR-4651 1 0 0
chr9:134842521|134842716 hsa-miR-4656 1 0 0
chr9:134842521|134842716 hsa-miR-5090 1 0 0
chr9:134842521|134842716 hsa-miR-5787 1 1 0
chr9:134842521|134842716 hsa-miR-6860 1 0 0
chr9:134842521|134842716 hsa-miR-9899 1 0 0
chr9:134842521|134842716 hsa-miR-4731-5p 0 1 0
chr9:134842521|134842716 hsa-miR-6747-5p 1 1 0
chr9:134842521|134842716 hsa-miR-6765-5p 1 0 0
chr9:134842521|134842716 hsa-miR-210-3p 1 0 0
chr9:134842521|134842716 hsa-miR-6892-3p 0 1 0
chr9:134842521|134842716 hsa-miR-150-5p 0 1 0
chr9:134842521|134842716 hsa-miR-219a-1-3p 1 0 0
chr9:134842521|134842716 hsa-miR-1227-5p 1 0 0
chr9:134842521|134842716 hsa-miR-6741-5p 1 0 0
chr9:134842521|134842716 hsa-miR-6727-5p 1 0 0
chr9:134842521|134842716 hsa-miR-6759-5p 1 0 0
chr9:134842521|134842716 hsa-miR-7845-5p 1 0 0
chr9:134842521|134842716 hsa-miR-6742-5p 1 1 0
chr9:134842521|134842716 hsa-miR-3151-5p 1 1 0
chr9:134842521|134842716 hsa-miR-3180-3p 1 0 0
chr9:134842521|134842716 hsa-miR-6748-5p 1 1 0
chr9:134842521|134842716 hsa-miR-6772-5p 1 0 0
chr9:134842521|134842716 hsa-miR-6793-5p 1 0 0
chr9:134842521|134842716 hsa-miR-6782-5p 1 0 0
chr9:134842521|134842716 hsa-miR-6821-5p 1 0 0
chr9:134842521|134842716 hsa-miR-7109-5p 1 1 0
chr9:134842521|134842716 hsa-miR-1226-5p 1 0 0
chr9:134842521|134842716 hsa-miR-6853-5p 0 1 0
chr9:134842521|134842716 hsa-miR-3944-3p 1 0 0
chr9:134842521|134842716 hsa-miR-1229-5p 1 0 0
chr9:134842521|134842716 hsa-miR-6784-5p 1 1 0
chr9:134842521|134842716 hsa-miR-4640-5p 1 0 0
chr9:134842521|134842716 hsa-miR-1228-5p 1 0 0
chr9:134842521|134842716 hsa-miR-296-3p 1 0 0
chr9:134842521|134842716 hsa-miR-92b-5p 1 0 0
chr9:134842521|134842716 hsa-miR-6749-5p 1 1 0
chr9:134842521|134842716 hsa-miR-6789-5p 1 0 0
chr9:134842521|134842716 hsa-miR-7154-5p 1 0 0
chr9:134842521|134842716 hsa-miR-7850-5p 1 0 0
chr9:134842521|134842716 hsa-miR-2114-5p 0 1 0
chr9:134842521|134842716 hsa-miR-6793-3p 0 1 0
chr9:134842521|134842716 hsa-miR-4750-5p 0 1 0
chr9:134842521|134842716 hsa-miR-2277-5p 1 0 0
chr9:134842521|134842716 hsa-miR-3126-3p 0 1 0
chr9:134842521|134842716 hsa-miR-4433a-5p 0 1 0
chr9:134842521|134842716 hsa-miR-6769b-5p 1 0 0
chr9:134842521|134842716 hsa-miR-6812-5p 1 0 0
chr9:134842521|134842716 hsa-miR-6816-5p 1 1 0
chr9:134842521|134842716 hsa-miR-6775-5p 1 0 0
chr9:134842521|134842716 hsa-miR-1343-5p 1 0 0
chr9:134842521|134842716 hsa-miR-5001-5p 0 1 0
chr9:134842521|134842716 hsa-miR-6726-5p 1 0 0
chr9:134842521|134842716 hsa-miR-6737-5p 1 1 0
chr9:134842521|134842716 hsa-miR-6752-5p 1 0 0
chr9:134842521|134842716 hsa-miR-6756-5p 1 1 0
chr9:134842521|134842716 hsa-miR-6769a-5p 1 1 0
chr9:134842521|134842716 hsa-miR-6803-5p 1 0 0
chr9:134842521|134842716 hsa-miR-7110-5p 1 0 0
chr9:134842521|134842716 hsa-miR-10401-5p 1 1 0
chr9:134842521|134842716 hsa-miR-6751-5p 1 0 0
chr9:134842521|134842716 hsa-miR-1915-3p 1 0 0
chr9:134842521|134842716 hsa-miR-3620-5p 1 0 0
chr9:134842521|134842716 hsa-miR-1237-5p 1 0 0
chr9:134842521|134842716 hsa-miR-328-5p 1 1 0
chr9:134842521|134842716 hsa-miR-4649-5p 1 1 0
chr9:134842521|134842716 hsa-miR-4701-3p 1 0 0
chr9:134842521|134842716 hsa-miR-4745-5p 1 0 0
chr9:134842521|134842716 hsa-miR-6729-5p 1 1 0
chr9:134842521|134842716 hsa-miR-6735-5p 1 0 0
chr9:134842521|134842716 hsa-miR-675-5p 1 0 0
chr9:134842521|134842716 hsa-miR-6846-5p 1 1 0
chr9:134842521|134842716 hsa-miR-6848-5p 1 1 0
chr9:134842521|134842716 hsa-miR-939-5p 1 1 0
chr9:134842521|134842716 hsa-miR-1238-5p 1 0 0
chr9:134842521|134842716 hsa-miR-4758-5p 1 0 0
chr9:134842521|134842716 hsa-miR-10394-3p 1 1 0
chr9:134842521|134842716 hsa-miR-3940-5p 1 1 0
chr9:134842521|134842716 hsa-miR-6736-5p 1 0 0
chr9:134842521|134842716 hsa-miR-6790-5p 1 0 0
chr9:134842521|134842716 hsa-miR-6849-5p 1 0 0
chr9:134842521|134842716 hsa-miR-6724-5p 1 0 0
chr9:134842521|134842716 hsa-miR-6791-5p 1 0 0
chr9:134842521|134842716 hsa-miR-10392-3p 1 0 0
chr9:134842521|134842716 hsa-miR-125b-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr9:134842521|134842716
ORF Type ORF1
Protein Length 59
Nucleotide Length 177
Protein Sequence MGPPHALSTPTRPGSGAMPPAPQLARPILFVNRSQGLGEGLPDLDTIFFSKFNLKMCIS
Nucleotide Sequence CTGGGCCCGCCCCACGCTCTGTCCACACCCACGCGCCCCGGGAGCGGGGCCATGCCTCCAGCCCCCCAGCTCGCCCGACCCATCCTGTTCGTGAATAGGTCTCAGGGGTTGGGGGAGGGACTGCCAGATTTGGACACTATATTTTTTTCTAAATTCAACTTGAAGATGTGTATTTCC
CircID chr9:134842521|134842716
ORF Type ORF2
Protein Length 35
Nucleotide Length 108
Protein Sequence MHPSAWARPTLCPHPRAPGAGPCLQPPSSPDPSCS
Nucleotide Sequence CTGCACCCCAGCGCCTGGGCCCGCCCCACGCTCTGTCCACACCCACGCGCCCCGGGAGCGGGGCCATGCCTCCAGCCCCCCAGCTCGCCCGACCCATCCTGTTCGTGA
CircID chr9:134842521|134842716
ORF Type ORF3
Protein Length 48
Nucleotide Length 144
Protein Sequence MAVPPPTPETYSRTGWVGRAGGLEAWPRSRGAWVWTERGAGPGAGVQL
Nucleotide Sequence CTGGCAGTCCCTCCCCCAACCCCTGAGACCTATTCACGAACAGGATGGGTCGGGCGAGCTGGGGGGCTGGAGGCATGGCCCCGCTCCCGGGGCGCGTGGGTGTGGACAGAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTA
CircID chr9:134842521|134842716
ORF Type ORF4
Protein Length 40
Nucleotide Length 123
Protein Sequence MRPIHEQDGSGELGGWRHGPAPGARGCGQSVGRAQALGCS
Nucleotide Sequence CTGAGACCTATTCACGAACAGGATGGGTCGGGCGAGCTGGGGGGCTGGAGGCATGGCCCCGCTCCCGGGGCGCGTGGGTGTGGACAGAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCTAG
CircID chr9:134842521|134842716
ORF Type ORF5
Protein Length 33
Nucleotide Length 99
Protein Sequence MGRASWGAGGMAPLPGRVGVDRAWGGPRRWGAA
Nucleotide Sequence ATGGGTCGGGCGAGCTGGGGGGCTGGAGGCATGGCCCCGCTCCCGGGGCGCGTGGGTGTGGACAGAGCGTGGGGCGGGCCCAGGCGCTGGGGTGCAGCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab