CircRNA Information

General Information
circRNA Basic Information
CircID chr9:136447569|136447882
Strand -
CircType exon
Host Gene ENSG00000148396.17;
Algorism CIRI2;
Sequence CTGCTCTTCTAGAGTACATGTTCACGGGGGCTCCAGGAGGCCCTGGGAGGGCAGGCGGGGCAGCTTGCACAGTCTTGGGCATCGAGGTTGGAGGTGGGGGCGGGGCTTTCTTCTGCAGAGGGAAACACAGCTTCAGACACCCACTGTGTGCACAGAAACCCACTGGGATGGCACAGTCAGGAGGCTCCAAAAGGGGCAACAGCCACCCAAATATCACAGGGCCACATGAGGCTGTTCCCTCCACTCACACCTCACACCCAACAGGAACTAGAATGACAATTTACCTCCTCTTCTGGCTCATTTAAATTCACCCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:136447569|136447882 hsa-miR-19a-5p 0 0 1
chr9:136447569|136447882 hsa-miR-19a-3p 0 0 1
chr9:136447569|136447882 hsa-miR-22-5p 0 0 1
chr9:136447569|136447882 hsa-miR-22-3p 0 0 1
chr9:136447569|136447882 hsa-miR-328-5p 0 0 1
chr9:136447569|136447882 hsa-miR-328-3p 0 0 1
chr9:136447569|136447882 hsa-miR-609 0 0 1
chr9:136447569|136447882 hsa-miR-616-5p 0 0 1
chr9:136447569|136447882 hsa-miR-616-3p 0 0 1
chr9:136447569|136447882 hsa-miR-629-5p 0 0 1
chr9:136447569|136447882 hsa-miR-629-3p 0 0 1
chr9:136447569|136447882 hsa-miR-298 0 1 1
chr9:136447569|136447882 hsa-miR-943 0 1 1
chr9:136447569|136447882 hsa-miR-1227-5p 0 0 1
chr9:136447569|136447882 hsa-miR-1227-3p 0 0 1
chr9:136447569|136447882 hsa-miR-663b 1 0 1
chr9:136447569|136447882 hsa-miR-1205 0 0 1
chr9:136447569|136447882 hsa-miR-1291 0 0 1
chr9:136447569|136447882 hsa-miR-1293 0 0 1
chr9:136447569|136447882 hsa-miR-1294 0 0 1
chr9:136447569|136447882 hsa-miR-1262 0 1 1
chr9:136447569|136447882 hsa-miR-127-5p 0 0 1
chr9:136447569|136447882 hsa-miR-1225-3p 0 1 1
chr9:136447569|136447882 hsa-miR-146b-3p 0 1 1
chr9:136447569|136447882 hsa-miR-1184 0 0 1
chr9:136447569|136447882 hsa-miR-1224-3p 1 1 1
chr9:136447569|136447882 hsa-miR-324-3p 0 0 1
chr9:136447569|136447882 hsa-miR-128 0 0 1
chr9:136447569|136447882 hsa-miR-642 0 0 1
chr9:136447569|136447882 hsa-miR-19b 0 0 1
chr9:136447569|136447882 hsa-miR-768-5p 0 0 1
chr9:136447569|136447882 hsa-miR-1913 1 1 0
chr9:136447569|136447882 hsa-miR-3147 1 0 0
chr9:136447569|136447882 hsa-miR-4298 1 0 0
chr9:136447569|136447882 hsa-miR-4258 1 0 0
chr9:136447569|136447882 hsa-miR-4259 1 0 0
chr9:136447569|136447882 hsa-miR-4254 0 1 0
chr9:136447569|136447882 hsa-miR-3918 0 1 0
chr9:136447569|136447882 hsa-miR-4432 0 1 0
chr9:136447569|136447882 hsa-miR-3689c 1 0 0
chr9:136447569|136447882 hsa-miR-3689e 0 1 0
chr9:136447569|136447882 hsa-miR-4506 1 0 0
chr9:136447569|136447882 hsa-miR-4512 0 1 0
chr9:136447569|136447882 hsa-miR-6127 1 0 0
chr9:136447569|136447882 hsa-miR-7974 1 1 0
chr9:136447569|136447882 hsa-miR-12114 1 0 0
chr9:136447569|136447882 hsa-miR-12115 0 1 0
chr9:136447569|136447882 hsa-miR-370-3p 1 0 0
chr9:136447569|136447882 hsa-miR-6749-3p 1 0 0
chr9:136447569|136447882 hsa-miR-18a-3p 0 1 0
chr9:136447569|136447882 hsa-miR-6747-5p 1 0 0
chr9:136447569|136447882 hsa-miR-6765-5p 1 0 0
chr9:136447569|136447882 hsa-miR-6825-5p 1 0 0
chr9:136447569|136447882 hsa-miR-6720-5p 1 0 0
chr9:136447569|136447882 hsa-miR-6807-5p 1 1 0
chr9:136447569|136447882 hsa-miR-4709-3p 0 1 0
chr9:136447569|136447882 hsa-miR-6741-5p 1 0 0
chr9:136447569|136447882 hsa-miR-6759-5p 1 0 0
chr9:136447569|136447882 hsa-miR-6742-5p 1 0 0
chr9:136447569|136447882 hsa-miR-6748-5p 0 1 0
chr9:136447569|136447882 hsa-miR-6772-5p 1 0 0
chr9:136447569|136447882 hsa-miR-6793-5p 0 1 0
chr9:136447569|136447882 hsa-miR-6796-5p 1 0 0
chr9:136447569|136447882 hsa-miR-23a-5p 1 0 0
chr9:136447569|136447882 hsa-miR-6782-5p 1 0 0
chr9:136447569|136447882 hsa-miR-6765-3p 1 0 0
chr9:136447569|136447882 hsa-miR-7109-3p 0 1 0
chr9:136447569|136447882 hsa-miR-1343-3p 1 0 0
chr9:136447569|136447882 hsa-miR-6852-5p 1 0 0
chr9:136447569|136447882 hsa-miR-4763-5p 1 1 0
chr9:136447569|136447882 hsa-miR-7108-3p 0 1 0
chr9:136447569|136447882 hsa-miR-4707-3p 1 0 0
chr9:136447569|136447882 hsa-miR-6894-3p 1 1 0
chr9:136447569|136447882 hsa-miR-4640-5p 1 0 0
chr9:136447569|136447882 hsa-miR-6824-5p 1 0 0
chr9:136447569|136447882 hsa-miR-3158-5p 0 1 0
chr9:136447569|136447882 hsa-miR-194-3p 0 1 0
chr9:136447569|136447882 hsa-miR-339-5p 1 0 0
chr9:136447569|136447882 hsa-miR-1237-3p 1 0 0
chr9:136447569|136447882 hsa-miR-660-3p 0 1 0
chr9:136447569|136447882 hsa-miR-4687-5p 1 0 0
chr9:136447569|136447882 hsa-miR-4758-3p 1 0 0
chr9:136447569|136447882 hsa-miR-6818-5p 0 1 0
chr9:136447569|136447882 hsa-miR-6752-3p 1 1 0
chr9:136447569|136447882 hsa-miR-6814-5p 0 1 0
chr9:136447569|136447882 hsa-miR-3605-3p 0 1 0
chr9:136447569|136447882 hsa-miR-216a-3p 0 1 0
chr9:136447569|136447882 hsa-miR-4749-3p 1 0 0
chr9:136447569|136447882 hsa-miR-4433a-5p 1 0 0
chr9:136447569|136447882 hsa-miR-3173-5p 1 1 0
chr9:136447569|136447882 hsa-miR-6779-3p 1 0 0
chr9:136447569|136447882 hsa-miR-4485-5p 0 1 0
chr9:136447569|136447882 hsa-miR-1233-5p 1 0 0
chr9:136447569|136447882 hsa-miR-3689b-3p 1 0 0
chr9:136447569|136447882 hsa-miR-6769b-5p 1 0 0
chr9:136447569|136447882 hsa-miR-6812-5p 1 1 0
chr9:136447569|136447882 hsa-miR-6737-5p 1 0 0
chr9:136447569|136447882 hsa-miR-6752-5p 1 0 0
chr9:136447569|136447882 hsa-miR-6756-5p 1 0 0
chr9:136447569|136447882 hsa-miR-6769a-5p 1 0 0
chr9:136447569|136447882 hsa-miR-6803-5p 1 0 0
chr9:136447569|136447882 hsa-miR-6819-5p 1 0 0
chr9:136447569|136447882 hsa-miR-7110-5p 1 0 0
chr9:136447569|136447882 hsa-miR-1249-5p 0 1 0
chr9:136447569|136447882 hsa-miR-6751-5p 1 0 0
chr9:136447569|136447882 hsa-miR-6797-5p 0 1 0
chr9:136447569|136447882 hsa-miR-1915-3p 0 1 0
chr9:136447569|136447882 hsa-miR-10526-3p 1 0 0
chr9:136447569|136447882 hsa-miR-3689a-3p 1 0 0
chr9:136447569|136447882 hsa-miR-4685-5p 0 1 0
chr9:136447569|136447882 hsa-miR-4701-3p 1 0 0
chr9:136447569|136447882 hsa-miR-4726-5p 1 0 0
chr9:136447569|136447882 hsa-miR-4745-5p 1 0 0
chr9:136447569|136447882 hsa-miR-6858-5p 1 0 0
chr9:136447569|136447882 hsa-miR-6831-5p 1 0 0
chr9:136447569|136447882 hsa-miR-939-5p 1 0 0
chr9:136447569|136447882 hsa-miR-1238-5p 0 1 0
chr9:136447569|136447882 hsa-miR-4758-5p 1 0 0
chr9:136447569|136447882 hsa-miR-10396a-3p 1 0 0
chr9:136447569|136447882 hsa-miR-5008-3p 1 0 0
chr9:136447569|136447882 hsa-miR-6736-5p 1 0 0
chr9:136447569|136447882 hsa-miR-6791-3p 1 1 0
chr9:136447569|136447882 hsa-miR-6750-5p 1 1 0
chr9:136447569|136447882 hsa-miR-6784-3p 1 0 0
chr9:136447569|136447882 hsa-miR-10401-3p 1 0 0
chr9:136447569|136447882 hsa-miR-6805-3p 1 0 0
chr9:136447569|136447882 hsa-miR-6829-3p 0 1 0
chr9:136447569|136447882 hsa-miR-6837-5p 0 1 0
chr9:136447569|136447882 hsa-miR-6775-3p 1 0 0
chr9:136447569|136447882 hsa-miR-10392-3p 1 0 0
chr9:136447569|136447882 hsa-miR-4723-3p 1 0 0
chr9:136447569|136447882 hsa-miR-3150b-5p 0 1 0
chr9:136447569|136447882 hsa-miR-6764-5p 0 1 0
chr9:136447569|136447882 hsa-miR-3689a-5p 0 1 0
chr9:136447569|136447882 hsa-miR-3689b-5p 0 1 0
chr9:136447569|136447882 hsa-miR-3150a-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr9:136447569|136447882
ORF Type ORF1
Protein Length 77
Nucleotide Length 234
Protein Sequence MGGQAGQLAQSWASRLEVGAGLSSAEGNTASDTHCVHRNPLGWHSQEAPKGATATQISQGHMRLFPPLTPHTQQELE
Nucleotide Sequence CTGGGAGGGCAGGCGGGGCAGCTTGCACAGTCTTGGGCATCGAGGTTGGAGGTGGGGGCGGGGCTTTCTTCTGCAGAGGGAAACACAGCTTCAGACACCCACTGTGTGCACAGAAACCCACTGGGATGGCACAGTCAGGAGGCTCCAAAAGGGGCAACAGCCACCCAAATATCACAGGGCCACATGAGGCTGTTCCCTCCACTCACACCTCACACCCAACAGGAACTAGAATGA
CircID chr9:136447569|136447882
ORF Type ORF2
Protein Length 54
Nucleotide Length 165
Protein Sequence MHSLGHRGWRWGRGFLLQRETQLQTPTVCTETHWDGTVRRLQKGQQPPKYHRAT
Nucleotide Sequence TTGCACAGTCTTGGGCATCGAGGTTGGAGGTGGGGGCGGGGCTTTCTTCTGCAGAGGGAAACACAGCTTCAGACACCCACTGTGTGCACAGAAACCCACTGGGATGGCACAGTCAGGAGGCTCCAAAAGGGGCAACAGCCACCCAAATATCACAGGGCCACATGA
CircID chr9:136447569|136447882
ORF Type ORF3
Protein Length 95
Nucleotide Length 288
Protein Sequence MFTGAPGGPGRAGGAACTVLGIEVGGGGGAFFCRGKHSFRHPLCAQKPTGMAQSGGSKRGNSHPNITGPHEAVPSTHTSHPTGTRMTIYLLFWLI
Nucleotide Sequence ATGTTCACGGGGGCTCCAGGAGGCCCTGGGAGGGCAGGCGGGGCAGCTTGCACAGTCTTGGGCATCGAGGTTGGAGGTGGGGGCGGGGCTTTCTTCTGCAGAGGGAAACACAGCTTCAGACACCCACTGTGTGCACAGAAACCCACTGGGATGGCACAGTCAGGAGGCTCCAAAAGGGGCAACAGCCACCCAAATATCACAGGGCCACATGAGGCTGTTCCCTCCACTCACACCTCACACCCAACAGGAACTAGAATGACAATTTACCTCCTCTTCTGGCTCATTTAA
CircID chr9:136447569|136447882
ORF Type ORF4
Protein Length 55
Nucleotide Length 168
Protein Sequence MCHPSGFLCTQWVSEAVFPSAEESPAPTSNLDAQDCASCPACPPRASWSPREHVL
Nucleotide Sequence CTGTGCCATCCCAGTGGGTTTCTGTGCACACAGTGGGTGTCTGAAGCTGTGTTTCCCTCTGCAGAAGAAAGCCCCGCCCCCACCTCCAACCTCGATGCCCAAGACTGTGCAAGCTGCCCCGCCTGCCCTCCCAGGGCCTCCTGGAGCCCCCGTGAACATGTACTCTAG
CircID chr9:136447569|136447882
ORF Type ORF5
Protein Length 67
Nucleotide Length 201
Protein Sequence MLPLLEPPDCAIPVGFCAHSGCLKLCFPLQKKAPPPPPTSMPKTVQAAPPALPGPPGAPVNMYSRRA
Nucleotide Sequence CTGTTGCCCCTTTTGGAGCCTCCTGACTGTGCCATCCCAGTGGGTTTCTGTGCACACAGTGGGTGTCTGAAGCTGTGTTTCCCTCTGCAGAAGAAAGCCCCGCCCCCACCTCCAACCTCGATGCCCAAGACTGTGCAAGCTGCCCCGCCTGCCCTCCCAGGGCCTCCTGGAGCCCCCGTGAACATGTACTCTAGAAGAGCA
CircID chr9:136447569|136447882
ORF Type ORF6
Protein Length 25
Nucleotide Length 78
Protein Sequence MGGCCPFWSLLTVPSQWVSVHTVGV
Nucleotide Sequence TTGGGTGGCTGTTGCCCCTTTTGGAGCCTCCTGACTGTGCCATCCCAGTGGGTTTCTGTGCACACAGTGGGTGTCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab