CircRNA Information

General Information
circRNA Basic Information
CircID chr9:136515381|136515570
Strand +
CircType exon
Host Gene ENSG00000148400.9;
Algorism CIRI2;
Sequence GAGTGCTCCAGCCAGCCCTGCCGCCACGGGGGCACCTGCCAGGACCGCGACAACGCCTACCTCTGCTTCTGCCTGAAGGGGACCACAGGTGGCCGGCCAGGCGGGTGGCCGGCGGGGGGCCAGTGGGCAGGGCGGGCCTGAGGACTGACCGACACGTGCCACCCCTTCAGGACCCAACTGCGAGATCAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:136515381|136515570 hsa-let-7b-5p 0 0 1
chr9:136515381|136515570 hsa-let-7b-3p 0 0 1
chr9:136515381|136515570 hsa-let-7c-5p 0 0 1
chr9:136515381|136515570 hsa-let-7c-3p 0 0 1
chr9:136515381|136515570 hsa-let-7d-5p 0 0 1
chr9:136515381|136515570 hsa-let-7d-3p 0 0 1
chr9:136515381|136515570 hsa-let-7e-5p 0 0 1
chr9:136515381|136515570 hsa-let-7e-3p 0 0 1
chr9:136515381|136515570 hsa-miR-98-5p 0 0 1
chr9:136515381|136515570 hsa-miR-98-3p 0 0 1
chr9:136515381|136515570 hsa-let-7g-5p 0 0 1
chr9:136515381|136515570 hsa-let-7g-3p 0 0 1
chr9:136515381|136515570 hsa-let-7i-5p 0 0 1
chr9:136515381|136515570 hsa-let-7i-3p 0 0 1
chr9:136515381|136515570 hsa-miR-193b-5p 0 0 1
chr9:136515381|136515570 hsa-miR-193b-3p 0 0 1
chr9:136515381|136515570 hsa-miR-564 0 0 1
chr9:136515381|136515570 hsa-miR-608 1 1 1
chr9:136515381|136515570 hsa-miR-298 1 1 1
chr9:136515381|136515570 hsa-miR-1207-5p 1 1 1
chr9:136515381|136515570 hsa-miR-455-3p 0 0 1
chr9:136515381|136515570 hsa-miR-193a-3p 0 0 1
chr9:136515381|136515570 hsa-let-7a 0 0 1
chr9:136515381|136515570 hsa-let-7f 0 0 1
chr9:136515381|136515570 hsa-miR-133b 1 1 0
chr9:136515381|136515570 hsa-miR-596 1 0 0
chr9:136515381|136515570 hsa-miR-663a 1 0 0
chr9:136515381|136515570 hsa-miR-658 1 0 0
chr9:136515381|136515570 hsa-miR-762 0 1 0
chr9:136515381|136515570 hsa-miR-764 0 1 0
chr9:136515381|136515570 hsa-miR-892b 0 1 0
chr9:136515381|136515570 hsa-miR-936 1 0 0
chr9:136515381|136515570 hsa-miR-1470 0 1 0
chr9:136515381|136515570 hsa-miR-3196 1 0 0
chr9:136515381|136515570 hsa-miR-4257 0 1 0
chr9:136515381|136515570 hsa-miR-4259 1 1 0
chr9:136515381|136515570 hsa-miR-3665 0 1 0
chr9:136515381|136515570 hsa-miR-3907 1 0 0
chr9:136515381|136515570 hsa-miR-4458 0 1 0
chr9:136515381|136515570 hsa-miR-4467 1 0 0
chr9:136515381|136515570 hsa-miR-4498 0 1 0
chr9:136515381|136515570 hsa-miR-4505 1 0 0
chr9:136515381|136515570 hsa-miR-4514 0 1 0
chr9:136515381|136515570 hsa-miR-3960 1 0 0
chr9:136515381|136515570 hsa-miR-4651 1 1 0
chr9:136515381|136515570 hsa-miR-4673 1 0 0
chr9:136515381|136515570 hsa-miR-4739 1 0 0
chr9:136515381|136515570 hsa-miR-6081 1 0 0
chr9:136515381|136515570 hsa-miR-6132 0 1 0
chr9:136515381|136515570 hsa-miR-8072 1 0 0
chr9:136515381|136515570 hsa-miR-4747-3p 0 1 0
chr9:136515381|136515570 hsa-miR-6799-5p 1 0 0
chr9:136515381|136515570 hsa-miR-7160-5p 1 0 0
chr9:136515381|136515570 hsa-miR-6820-5p 1 1 0
chr9:136515381|136515570 hsa-miR-6806-5p 1 0 0
chr9:136515381|136515570 hsa-miR-423-3p 1 0 0
chr9:136515381|136515570 hsa-miR-6793-5p 1 0 0
chr9:136515381|136515570 hsa-miR-4697-3p 1 0 0
chr9:136515381|136515570 hsa-miR-6732-5p 1 0 0
chr9:136515381|136515570 hsa-miR-2467-3p 1 1 0
chr9:136515381|136515570 hsa-miR-1343-3p 1 0 0
chr9:136515381|136515570 hsa-miR-4763-5p 1 0 0
chr9:136515381|136515570 hsa-miR-7108-3p 0 1 0
chr9:136515381|136515570 hsa-miR-4707-3p 0 1 0
chr9:136515381|136515570 hsa-miR-885-3p 1 0 0
chr9:136515381|136515570 hsa-miR-296-3p 0 1 0
chr9:136515381|136515570 hsa-miR-4787-5p 1 0 0
chr9:136515381|136515570 hsa-miR-4446-3p 0 1 0
chr9:136515381|136515570 hsa-miR-7112-5p 1 0 0
chr9:136515381|136515570 hsa-miR-1910-5p 1 1 0
chr9:136515381|136515570 hsa-miR-6752-3p 0 1 0
chr9:136515381|136515570 hsa-miR-4632-3p 0 1 0
chr9:136515381|136515570 hsa-miR-891a-3p 0 1 0
chr9:136515381|136515570 hsa-miR-4649-3p 1 0 0
chr9:136515381|136515570 hsa-miR-3173-5p 0 1 0
chr9:136515381|136515570 hsa-miR-3179 0 1 0
chr9:136515381|136515570 hsa-miR-4485-5p 0 1 0
chr9:136515381|136515570 hsa-miR-133a-3p 1 1 0
chr9:136515381|136515570 hsa-miR-10400-5p 1 0 0
chr9:136515381|136515570 hsa-miR-4763-3p 1 1 0
chr9:136515381|136515570 hsa-miR-6787-5p 1 0 0
chr9:136515381|136515570 hsa-miR-6816-5p 1 0 0
chr9:136515381|136515570 hsa-miR-6893-5p 1 1 0
chr9:136515381|136515570 hsa-miR-6737-5p 1 0 0
chr9:136515381|136515570 hsa-miR-6743-5p 1 0 0
chr9:136515381|136515570 hsa-miR-6722-3p 1 0 0
chr9:136515381|136515570 hsa-miR-6780a-5p 1 0 0
chr9:136515381|136515570 hsa-miR-6808-5p 1 0 0
chr9:136515381|136515570 hsa-miR-6836-5p 0 1 0
chr9:136515381|136515570 hsa-miR-10396b-5p 1 0 0
chr9:136515381|136515570 hsa-miR-1237-5p 1 0 0
chr9:136515381|136515570 hsa-miR-1909-3p 1 0 0
chr9:136515381|136515570 hsa-miR-1910-3p 0 1 0
chr9:136515381|136515570 hsa-miR-6511a-5p 1 1 0
chr9:136515381|136515570 hsa-miR-6799-3p 0 1 0
chr9:136515381|136515570 hsa-miR-6791-5p 1 0 0
chr9:136515381|136515570 hsa-miR-6753-3p 1 0 0
chr9:136515381|136515570 hsa-miR-9851-5p 1 0 0
chr9:136515381|136515570 hsa-miR-10401-3p 1 1 0
chr9:136515381|136515570 hsa-miR-6810-3p 0 1 0
chr9:136515381|136515570 hsa-miR-6775-3p 0 1 0
chr9:136515381|136515570 hsa-miR-10392-3p 1 0 0
chr9:136515381|136515570 hsa-miR-6884-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr9:136515381|136515570
ORF Type ORF1
Protein Length 57
Nucleotide Length 171
Protein Sequence MPPRGHLPGPRQRLPLLLPEGDHRWPARRVAGGGPVGRAGLRTDRHVPPLQDPTARS
Nucleotide Sequence CTGCCGCCACGGGGGCACCTGCCAGGACCGCGACAACGCCTACCTCTGCTTCTGCCTGAAGGGGACCACAGGTGGCCGGCCAGGCGGGTGGCCGGCGGGGGGCCAGTGGGCAGGGCGGGCCTGAGGACTGACCGACACGTGCCACCCCTTCAGGACCCAACTGCGAGATCA
CircID chr9:136515381|136515570
ORF Type ORF2
Protein Length 43
Nucleotide Length 129
Protein Sequence MPTGPPPATRLAGHLWSPSGRSRGRRCRGPGRCPRGGRAGWST
Nucleotide Sequence CTGCCCACTGGCCCCCCGCCGGCCACCCGCCTGGCCGGCCACCTGTGGTCCCCTTCAGGCAGAAGCAGAGGTAGGCGTTGTCGCGGTCCTGGCAGGTGCCCCCGTGGCGGCAGGGCTGGCTGGAGCACT
CircID chr9:136515381|136515570
ORF Type ORF3
Protein Length 63
Nucleotide Length 189
Protein Sequence LISQLGPEGVARVGQSSGPPCPLAPRRPPAWPATCGPLQAEAEVGVVAVLAGAPVAAGLAGAL
Nucleotide Sequence TTGATCTCGCAGTTGGGTCCTGAAGGGGTGGCACGTGTCGGTCAGTCCTCAGGCCCGCCCTGCCCACTGGCCCCCCGCCGGCCACCCGCCTGGCCGGCCACCTGTGGTCCCCTTCAGGCAGAAGCAGAGGTAGGCGTTGTCGCGGTCCTGGCAGGTGCCCCCGTGGCGGCAGGGCTGGCTGGAGCACTC
CircID chr9:136515381|136515570
ORF Type ORF4
Protein Length 37
Nucleotide Length 114
Protein Sequence MKGWHVSVSPQARPAHWPPAGHPPGRPPVVPFRQKQR
Nucleotide Sequence CTGAAGGGGTGGCACGTGTCGGTCAGTCCTCAGGCCCGCCCTGCCCACTGGCCCCCCGCCGGCCACCCGCCTGGCCGGCCACCTGTGGTCCCCTTCAGGCAGAAGCAGAGGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab