CircRNA Information

General Information
circRNA Basic Information
CircID chr9:136693285|136693486
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CCCCTGTGCTCAGCCCGGCTCCCACTGCACTGTGGAGTGCGCGTTCATGTTCCACACGTCTCTGCCTTTGCTGCTTCCTTCTTCCGTTGCTTTGTGCATTTTGTCCAATTCTTTGTTCATGATGCCAAGAACCTGGACACCCTCTGCCGGACATGAGGCTGTGCTGACCTGCCCTCGGCTCGGCCGGCGTCTGCCCCACACT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:136693285|136693486 hsa-miR-15a-5p 0 0 1
chr9:136693285|136693486 hsa-miR-15a-3p 0 0 1
chr9:136693285|136693486 hsa-miR-198 0 0 1
chr9:136693285|136693486 hsa-miR-148a-5p 0 0 1
chr9:136693285|136693486 hsa-miR-148a-3p 0 0 1
chr9:136693285|136693486 hsa-miR-15b-5p 0 0 1
chr9:136693285|136693486 hsa-miR-15b-3p 0 0 1
chr9:136693285|136693486 hsa-miR-152-5p 0 0 1
chr9:136693285|136693486 hsa-miR-152-3p 0 0 1
chr9:136693285|136693486 hsa-miR-191-5p 0 0 1
chr9:136693285|136693486 hsa-miR-191-3p 0 0 1
chr9:136693285|136693486 hsa-miR-186-5p 0 0 1
chr9:136693285|136693486 hsa-miR-186-3p 0 0 1
chr9:136693285|136693486 hsa-miR-195-5p 0 0 1
chr9:136693285|136693486 hsa-miR-195-3p 0 0 1
chr9:136693285|136693486 hsa-miR-148b-5p 0 0 1
chr9:136693285|136693486 hsa-miR-148b-3p 0 0 1
chr9:136693285|136693486 hsa-miR-424-5p 0 0 1
chr9:136693285|136693486 hsa-miR-424-3p 0 0 1
chr9:136693285|136693486 hsa-miR-497-5p 0 0 1
chr9:136693285|136693486 hsa-miR-497-3p 0 0 1
chr9:136693285|136693486 hsa-miR-523-5p 0 0 1
chr9:136693285|136693486 hsa-miR-523-3p 0 0 1
chr9:136693285|136693486 hsa-miR-545-5p 0 0 1
chr9:136693285|136693486 hsa-miR-545-3p 0 0 1
chr9:136693285|136693486 hsa-miR-920 1 0 1
chr9:136693285|136693486 hsa-miR-1252-5p 0 0 1
chr9:136693285|136693486 hsa-miR-1252-3p 0 0 1
chr9:136693285|136693486 hsa-miR-491-5p 0 0 1
chr9:136693285|136693486 hsa-miR-486-3p 1 1 1
chr9:136693285|136693486 hsa-miR-615-3p 0 1 1
chr9:136693285|136693486 hsa-miR-330-3p 1 1 1
chr9:136693285|136693486 hsa-miR-128 0 0 1
chr9:136693285|136693486 hsa-miR-16 0 0 1
chr9:136693285|136693486 hsa-miR-220c 0 0 1
chr9:136693285|136693486 hsa-miR-637 1 0 0
chr9:136693285|136693486 hsa-miR-650 1 0 0
chr9:136693285|136693486 hsa-miR-658 1 0 0
chr9:136693285|136693486 hsa-miR-298 1 0 0
chr9:136693285|136693486 hsa-miR-3125 1 0 0
chr9:136693285|136693486 hsa-miR-3147 1 0 0
chr9:136693285|136693486 hsa-miR-3154 1 0 0
chr9:136693285|136693486 hsa-miR-3175 1 0 0
chr9:136693285|136693486 hsa-miR-3185 1 1 0
chr9:136693285|136693486 hsa-miR-4300 1 0 0
chr9:136693285|136693486 hsa-miR-3911 0 1 0
chr9:136693285|136693486 hsa-miR-3939 0 1 0
chr9:136693285|136693486 hsa-miR-4476 1 0 0
chr9:136693285|136693486 hsa-miR-4488 1 0 0
chr9:136693285|136693486 hsa-miR-4533 1 0 0
chr9:136693285|136693486 hsa-miR-4537 0 1 0
chr9:136693285|136693486 hsa-miR-3960 1 0 0
chr9:136693285|136693486 hsa-miR-4651 1 0 0
chr9:136693285|136693486 hsa-miR-4654 1 0 0
chr9:136693285|136693486 hsa-miR-4656 0 1 0
chr9:136693285|136693486 hsa-miR-4730 1 0 0
chr9:136693285|136693486 hsa-miR-4736 0 1 0
chr9:136693285|136693486 hsa-miR-4739 1 0 0
chr9:136693285|136693486 hsa-miR-6081 1 1 0
chr9:136693285|136693486 hsa-miR-6090 1 0 0
chr9:136693285|136693486 hsa-miR-6125 1 0 0
chr9:136693285|136693486 hsa-miR-6863 0 1 0
chr9:136693285|136693486 hsa-miR-8073 1 0 0
chr9:136693285|136693486 hsa-miR-12118 1 0 0
chr9:136693285|136693486 hsa-miR-12120 1 0 0
chr9:136693285|136693486 hsa-miR-671-5p 1 0 0
chr9:136693285|136693486 hsa-miR-6894-5p 1 0 0
chr9:136693285|136693486 hsa-miR-25-5p 1 1 0
chr9:136693285|136693486 hsa-miR-6799-5p 1 0 0
chr9:136693285|136693486 hsa-miR-6510-5p 1 0 0
chr9:136693285|136693486 hsa-miR-6804-5p 0 1 0
chr9:136693285|136693486 hsa-miR-6833-5p 0 1 0
chr9:136693285|136693486 hsa-miR-6089 1 0 0
chr9:136693285|136693486 hsa-miR-6873-5p 1 0 0
chr9:136693285|136693486 hsa-miR-4695-5p 1 0 0
chr9:136693285|136693486 hsa-miR-6746-5p 1 1 0
chr9:136693285|136693486 hsa-miR-6742-5p 1 0 0
chr9:136693285|136693486 hsa-miR-503-5p 1 0 0
chr9:136693285|136693486 hsa-miR-6796-5p 0 1 0
chr9:136693285|136693486 hsa-miR-3190-3p 1 0 0
chr9:136693285|136693486 hsa-miR-6827-5p 1 0 0
chr9:136693285|136693486 hsa-miR-6798-5p 1 0 0
chr9:136693285|136693486 hsa-miR-6770-5p 1 0 0
chr9:136693285|136693486 hsa-miR-6760-5p 1 0 0
chr9:136693285|136693486 hsa-miR-2467-3p 1 1 0
chr9:136693285|136693486 hsa-miR-6874-5p 1 0 0
chr9:136693285|136693486 hsa-miR-6786-5p 1 0 0
chr9:136693285|136693486 hsa-miR-1226-5p 1 0 0
chr9:136693285|136693486 hsa-miR-30c-2-3p 1 0 0
chr9:136693285|136693486 hsa-miR-4690-5p 1 0 0
chr9:136693285|136693486 hsa-miR-92b-5p 1 0 0
chr9:136693285|136693486 hsa-miR-149-3p 1 0 0
chr9:136693285|136693486 hsa-miR-3616-3p 0 1 0
chr9:136693285|136693486 hsa-miR-6830-5p 1 0 0
chr9:136693285|136693486 hsa-miR-6828-5p 1 0 0
chr9:136693285|136693486 hsa-miR-7112-5p 1 1 0
chr9:136693285|136693486 hsa-miR-4750-5p 1 0 0
chr9:136693285|136693486 hsa-miR-216a-3p 0 1 0
chr9:136693285|136693486 hsa-miR-4520-2-3p 0 1 0
chr9:136693285|136693486 hsa-miR-4520-3p 0 1 0
chr9:136693285|136693486 hsa-miR-1207-5p 1 0 0
chr9:136693285|136693486 hsa-miR-1233-5p 1 1 0
chr9:136693285|136693486 hsa-miR-4763-3p 1 1 0
chr9:136693285|136693486 hsa-miR-6778-5p 1 0 0
chr9:136693285|136693486 hsa-miR-6865-5p 1 0 0
chr9:136693285|136693486 hsa-miR-6893-5p 1 0 0
chr9:136693285|136693486 hsa-miR-6726-5p 1 1 0
chr9:136693285|136693486 hsa-miR-6743-5p 0 1 0
chr9:136693285|136693486 hsa-miR-6803-5p 1 0 0
chr9:136693285|136693486 hsa-miR-10401-5p 0 1 0
chr9:136693285|136693486 hsa-miR-6779-5p 1 0 0
chr9:136693285|136693486 hsa-miR-6808-5p 1 1 0
chr9:136693285|136693486 hsa-miR-6879-5p 1 1 0
chr9:136693285|136693486 hsa-miR-1237-5p 1 0 0
chr9:136693285|136693486 hsa-miR-328-5p 1 0 0
chr9:136693285|136693486 hsa-miR-4632-5p 1 1 0
chr9:136693285|136693486 hsa-miR-6735-5p 1 1 0
chr9:136693285|136693486 hsa-miR-4436b-3p 1 1 0
chr9:136693285|136693486 hsa-miR-4723-5p 1 0 0
chr9:136693285|136693486 hsa-miR-6831-5p 1 1 0
chr9:136693285|136693486 hsa-miR-6511a-5p 1 1 0
chr9:136693285|136693486 hsa-miR-30c-1-3p 1 0 0
chr9:136693285|136693486 hsa-miR-7843-5p 1 1 0
chr9:136693285|136693486 hsa-miR-4665-5p 1 0 0
chr9:136693285|136693486 hsa-miR-3173-3p 1 1 0
chr9:136693285|136693486 hsa-miR-6876-5p 1 0 0
chr9:136693285|136693486 hsa-miR-6750-5p 1 0 0
chr9:136693285|136693486 hsa-miR-5591-5p 1 0 0
chr9:136693285|136693486 hsa-miR-6822-5p 1 0 0
chr9:136693285|136693486 hsa-miR-2682-5p 1 0 0
chr9:136693285|136693486 hsa-miR-6838-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr9:136693285|136693486
ORF Type ORF1
Protein Length 50
Nucleotide Length 153
Protein Sequence MCSARLPLHCGVRVHVPHVSAFAASFFRCFVHFVQFFVHDAKNLDTLCRT
Nucleotide Sequence CTGTGCTCAGCCCGGCTCCCACTGCACTGTGGAGTGCGCGTTCATGTTCCACACGTCTCTGCCTTTGCTGCTTCCTTCTTCCGTTGCTTTGTGCATTTTGTCCAATTCTTTGTTCATGATGCCAAGAACCTGGACACCCTCTGCCGGACATGA
CircID chr9:136693285|136693486
ORF Type ORF2
Protein Length 52
Nucleotide Length 156
Protein Sequence MFHTSLPLLLPSSVALCILSNSLFMMPRTWTPSAGHEAVLTCPRLGRRLPHT
Nucleotide Sequence ATGTTCCACACGTCTCTGCCTTTGCTGCTTCCTTCTTCCGTTGCTTTGTGCATTTTGTCCAATTCTTTGTTCATGATGCCAAGAACCTGGACACCCTCTGCCGGACATGAGGCTGTGCTGACCTGCCCTCGGCTCGGCCGGCGTCTGCCCCACACT
CircID chr9:136693285|136693486
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MWSARSCSTRLCLCCFLLPLLCAFCPILCS
Nucleotide Sequence CTGTGGAGTGCGCGTTCATGTTCCACACGTCTCTGCCTTTGCTGCTTCCTTCTTCCGTTGCTTTGTGCATTTTGTCCAATTCTTTGTTCATGA
CircID chr9:136693285|136693486
ORF Type ORF4
Protein Length 51
Nucleotide Length 153
Protein Sequence MSGRGCPGSWHHEQRIGQNAQSNGRRKQQRQRRVEHERALHSAVGAGLSTG
Nucleotide Sequence ATGTCCGGCAGAGGGTGTCCAGGTTCTTGGCATCATGAACAAAGAATTGGACAAAATGCACAAAGCAACGGAAGAAGGAAGCAGCAAAGGCAGAGACGTGTGGAACATGAACGCGCACTCCACAGTGCAGTGGGAGCCGGGCTGAGCACAGGG
CircID chr9:136693285|136693486
ORF Type ORF5
Protein Length 36
Nucleotide Length 111
Protein Sequence MNKELDKMHKATEEGSSKGRDVWNMNAHSTVQWEPG
Nucleotide Sequence ATGAACAAAGAATTGGACAAAATGCACAAAGCAACGGAAGAAGGAAGCAGCAAAGGCAGAGACGTGTGGAACATGAACGCGCACTCCACAGTGCAGTGGGAGCCGGGCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab