CircRNA Information

General Information
circRNA Basic Information
CircID chr9:136862979|136863341
Strand -
CircType exon
Host Gene ENSG00000107223.11;
Algorism CIRI2;
Sequence CTGTGGCTTCTCATTGATTTTCGTGGCCAGGTCCTTCTGCGTAAGCCCCTTGCTCTGCACCTTGCTGGATCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:136862979|136863341 hsa-miR-18a-5p 0 0 1
chr9:136862979|136863341 hsa-miR-18a-3p 0 0 1
chr9:136862979|136863341 hsa-miR-107 0 0 1
chr9:136862979|136863341 hsa-miR-340-5p 0 0 1
chr9:136862979|136863341 hsa-miR-340-3p 0 0 1
chr9:136862979|136863341 hsa-miR-18b-5p 0 0 1
chr9:136862979|136863341 hsa-miR-18b-3p 0 0 1
chr9:136862979|136863341 hsa-miR-492 0 0 1
chr9:136862979|136863341 hsa-miR-507 0 0 1
chr9:136862979|136863341 hsa-miR-557 0 0 1
chr9:136862979|136863341 hsa-miR-568 0 0 1
chr9:136862979|136863341 hsa-miR-588 0 1 1
chr9:136862979|136863341 hsa-miR-604 0 0 1
chr9:136862979|136863341 hsa-miR-629-5p 0 0 1
chr9:136862979|136863341 hsa-miR-629-3p 0 0 1
chr9:136862979|136863341 hsa-miR-631 0 1 1
chr9:136862979|136863341 hsa-miR-640 0 0 1
chr9:136862979|136863341 hsa-miR-1301-5p 0 0 1
chr9:136862979|136863341 hsa-miR-1301-3p 0 0 1
chr9:136862979|136863341 hsa-miR-298 0 0 1
chr9:136862979|136863341 hsa-miR-541-5p 0 0 1
chr9:136862979|136863341 hsa-miR-541-3p 0 0 1
chr9:136862979|136863341 hsa-miR-939-5p 0 0 1
chr9:136862979|136863341 hsa-miR-939-3p 0 0 1
chr9:136862979|136863341 hsa-miR-942-5p 0 0 1
chr9:136862979|136863341 hsa-miR-942-3p 0 0 1
chr9:136862979|136863341 hsa-miR-1205 0 1 1
chr9:136862979|136863341 hsa-miR-1253 0 0 1
chr9:136862979|136863341 hsa-miR-1266-5p 0 0 1
chr9:136862979|136863341 hsa-miR-1266-3p 0 0 1
chr9:136862979|136863341 hsa-miR-671-5p 0 1 1
chr9:136862979|136863341 hsa-miR-485-5p 0 1 1
chr9:136862979|136863341 hsa-miR-142-5p 0 0 1
chr9:136862979|136863341 hsa-miR-654-5p 0 0 1
chr9:136862979|136863341 hsa-miR-331-3p 0 0 1
chr9:136862979|136863341 hsa-miR-338-3p 0 0 1
chr9:136862979|136863341 hsa-miR-483-3p 0 0 1
chr9:136862979|136863341 hsa-miR-450b-5p 0 0 1
chr9:136862979|136863341 hsa-miR-103 0 0 1
chr9:136862979|136863341 hsa-miR-1300 0 0 1
chr9:136862979|136863341 hsa-miR-346 1 0 0
chr9:136862979|136863341 hsa-miR-518b 0 1 0
chr9:136862979|136863341 hsa-miR-608 1 0 0
chr9:136862979|136863341 hsa-miR-623 1 1 0
chr9:136862979|136863341 hsa-miR-637 1 0 0
chr9:136862979|136863341 hsa-miR-638 1 0 0
chr9:136862979|136863341 hsa-miR-661 1 0 0
chr9:136862979|136863341 hsa-miR-658 1 0 0
chr9:136862979|136863341 hsa-miR-762 1 0 0
chr9:136862979|136863341 hsa-miR-760 1 0 0
chr9:136862979|136863341 hsa-miR-1268a 1 0 0
chr9:136862979|136863341 hsa-miR-1538 1 1 0
chr9:136862979|136863341 hsa-miR-2861 1 0 0
chr9:136862979|136863341 hsa-miR-3132 1 0 0
chr9:136862979|136863341 hsa-miR-3197 1 0 0
chr9:136862979|136863341 hsa-miR-4316 0 1 0
chr9:136862979|136863341 hsa-miR-3661 0 1 0
chr9:136862979|136863341 hsa-miR-3936 0 1 0
chr9:136862979|136863341 hsa-miR-1268b 1 0 0
chr9:136862979|136863341 hsa-miR-4466 1 0 0
chr9:136862979|136863341 hsa-miR-4488 1 0 0
chr9:136862979|136863341 hsa-miR-4507 1 0 0
chr9:136862979|136863341 hsa-miR-4525 1 1 0
chr9:136862979|136863341 hsa-miR-4535 1 0 0
chr9:136862979|136863341 hsa-miR-4651 1 0 0
chr9:136862979|136863341 hsa-miR-4669 1 0 0
chr9:136862979|136863341 hsa-miR-4688 1 0 0
chr9:136862979|136863341 hsa-miR-4706 1 1 0
chr9:136862979|136863341 hsa-miR-4741 1 0 0
chr9:136862979|136863341 hsa-miR-4748 1 1 0
chr9:136862979|136863341 hsa-miR-5194 1 0 0
chr9:136862979|136863341 hsa-miR-5572 1 0 0
chr9:136862979|136863341 hsa-miR-5705 1 0 0
chr9:136862979|136863341 hsa-miR-5787 1 0 0
chr9:136862979|136863341 hsa-miR-6085 0 1 0
chr9:136862979|136863341 hsa-miR-6132 1 0 0
chr9:136862979|136863341 hsa-miR-8089 1 1 0
chr9:136862979|136863341 hsa-miR-12115 0 1 0
chr9:136862979|136863341 hsa-miR-12125 0 1 0
chr9:136862979|136863341 hsa-miR-138-5p 0 1 0
chr9:136862979|136863341 hsa-miR-7155-5p 1 1 0
chr9:136862979|136863341 hsa-miR-6747-5p 1 0 0
chr9:136862979|136863341 hsa-miR-3150a-3p 1 0 0
chr9:136862979|136863341 hsa-miR-6825-5p 1 1 0
chr9:136862979|136863341 hsa-miR-6894-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6857-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6822-3p 0 1 0
chr9:136862979|136863341 hsa-miR-6720-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6799-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6728-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6089 1 0 0
chr9:136862979|136863341 hsa-miR-4722-5p 1 1 0
chr9:136862979|136863341 hsa-miR-6730-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6820-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6842-3p 1 0 0
chr9:136862979|136863341 hsa-miR-6759-5p 0 1 0
chr9:136862979|136863341 hsa-miR-3187-3p 1 1 0
chr9:136862979|136863341 hsa-miR-6721-5p 1 0 0
chr9:136862979|136863341 hsa-miR-197-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6776-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6787-3p 1 0 0
chr9:136862979|136863341 hsa-miR-7108-5p 1 0 0
chr9:136862979|136863341 hsa-miR-3180-3p 1 0 0
chr9:136862979|136863341 hsa-miR-6748-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6793-5p 1 1 0
chr9:136862979|136863341 hsa-miR-6796-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6732-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6805-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6798-5p 1 0 0
chr9:136862979|136863341 hsa-miR-2467-3p 1 0 0
chr9:136862979|136863341 hsa-miR-6782-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6810-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6735-3p 1 0 0
chr9:136862979|136863341 hsa-miR-6882-3p 1 0 0
chr9:136862979|136863341 hsa-miR-6786-5p 1 1 0
chr9:136862979|136863341 hsa-miR-6852-5p 1 1 0
chr9:136862979|136863341 hsa-miR-6740-5p 0 1 0
chr9:136862979|136863341 hsa-miR-4786-3p 0 1 0
chr9:136862979|136863341 hsa-miR-1229-5p 1 0 0
chr9:136862979|136863341 hsa-miR-193b-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6784-5p 1 1 0
chr9:136862979|136863341 hsa-miR-1228-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6771-5p 1 0 0
chr9:136862979|136863341 hsa-miR-4732-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6749-5p 1 0 0
chr9:136862979|136863341 hsa-miR-4743-5p 1 0 0
chr9:136862979|136863341 hsa-miR-3648 1 0 0
chr9:136862979|136863341 hsa-miR-4787-5p 1 0 0
chr9:136862979|136863341 hsa-miR-425-3p 0 1 0
chr9:136862979|136863341 hsa-miR-149-3p 1 1 0
chr9:136862979|136863341 hsa-miR-1304-3p 0 1 0
chr9:136862979|136863341 hsa-miR-6824-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6789-5p 1 0 0
chr9:136862979|136863341 hsa-miR-941 1 1 0
chr9:136862979|136863341 hsa-miR-5010-5p 1 1 0
chr9:136862979|136863341 hsa-miR-1180-3p 1 0 0
chr9:136862979|136863341 hsa-miR-2276-5p 0 1 0
chr9:136862979|136863341 hsa-miR-6741-3p 0 1 0
chr9:136862979|136863341 hsa-miR-3940-3p 0 1 0
chr9:136862979|136863341 hsa-miR-1914-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6816-3p 0 1 0
chr9:136862979|136863341 hsa-miR-1199-3p 1 0 0
chr9:136862979|136863341 hsa-miR-6890-3p 0 1 0
chr9:136862979|136863341 hsa-miR-10400-5p 1 0 0
chr9:136862979|136863341 hsa-miR-1207-5p 1 0 0
chr9:136862979|136863341 hsa-miR-4763-3p 1 0 0
chr9:136862979|136863341 hsa-miR-6787-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6812-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6816-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6775-5p 1 0 0
chr9:136862979|136863341 hsa-miR-1343-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6737-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6743-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6752-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6756-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6803-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6815-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6819-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6842-5p 1 1 0
chr9:136862979|136863341 hsa-miR-7110-5p 1 0 0
chr9:136862979|136863341 hsa-miR-11181-3p 1 0 0
chr9:136862979|136863341 hsa-miR-6722-3p 1 0 0
chr9:136862979|136863341 hsa-miR-6751-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6763-5p 1 1 0
chr9:136862979|136863341 hsa-miR-6779-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6780a-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6797-5p 1 0 0
chr9:136862979|136863341 hsa-miR-7111-5p 1 0 0
chr9:136862979|136863341 hsa-miR-4755-5p 1 0 0
chr9:136862979|136863341 hsa-miR-4728-5p 1 1 0
chr9:136862979|136863341 hsa-miR-5196-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6780b-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6836-5p 1 0 0
chr9:136862979|136863341 hsa-miR-10396a-5p 1 0 0
chr9:136862979|136863341 hsa-miR-10396b-5p 1 0 0
chr9:136862979|136863341 hsa-miR-1237-5p 1 0 0
chr9:136862979|136863341 hsa-miR-1909-3p 1 0 0
chr9:136862979|136863341 hsa-miR-328-5p 1 0 0
chr9:136862979|136863341 hsa-miR-4685-5p 1 0 0
chr9:136862979|136863341 hsa-miR-4725-3p 1 0 0
chr9:136862979|136863341 hsa-miR-4745-3p 1 0 0
chr9:136862979|136863341 hsa-miR-6738-5p 1 0 0
chr9:136862979|136863341 hsa-miR-675-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6777-5p 1 1 0
chr9:136862979|136863341 hsa-miR-6794-5p 1 1 0
chr9:136862979|136863341 hsa-miR-6846-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6848-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6858-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6883-5p 1 1 0
chr9:136862979|136863341 hsa-miR-6887-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6889-5p 1 1 0
chr9:136862979|136863341 hsa-miR-6731-5p 1 0 0
chr9:136862979|136863341 hsa-miR-1914-3p 1 0 0
chr9:136862979|136863341 hsa-miR-6855-5p 1 1 0
chr9:136862979|136863341 hsa-miR-6750-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6785-5p 1 1 0
chr9:136862979|136863341 hsa-miR-3184-5p 0 1 0
chr9:136862979|136863341 hsa-miR-6724-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6791-5p 1 0 0
chr9:136862979|136863341 hsa-miR-6762-5p 1 0 0
chr9:136862979|136863341 hsa-miR-10392-3p 1 0 0
chr9:136862979|136863341 hsa-miR-6884-5p 0 1 0
chr9:136862979|136863341 hsa-miR-10394-5p 0 1 0
chr9:136862979|136863341 hsa-miR-33b-3p 1 1 0
chr9:136862979|136863341 hsa-miR-664a-5p 0 1 0
chr9:136862979|136863341 hsa-miR-433-5p 0 1 0
chr9:136862979|136863341 hsa-miR-518c-3p 0 1 0
chr9:136862979|136863341 hsa-miR-518d-3p 0 1 0
chr9:136862979|136863341 hsa-miR-526a-3p 0 1 0
chr9:136862979|136863341 hsa-miR-518f-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr9:136862979|136863341
ORF Type ORF1
Protein Length 31
Nucleotide Length 96
Protein Sequence LWLLIDFLKRRCALYTSAPLGLLQNQARSVA
Nucleotide Sequence CTGTGGCTTCTCATTGATTTTCTAAAGAGAAGATGTGCTTTATACACATCAGCTCCACTAGGACTGCTGCAAAACCAGGCGCGAAGCGTCGCCTGA
CircID chr9:136862979|136863341
ORF Type ORF2
Protein Length 36
Nucleotide Length 111
Protein Sequence MASRGIPCRGTRGVEPTLPVLSEHRPSPSPNPQPQE
Nucleotide Sequence CTGGCTTCCCGAGGCATTCCCTGCAGGGGAACCAGGGGGGTGGAGCCCACCCTCCCCGTGCTATCTGAACACCGGCCATCCCCCTCCCCAAACCCACAACCCCAGGAGTGA
CircID chr9:136862979|136863341
ORF Type ORF3
Protein Length 99
Nucleotide Length 300
Protein Sequence MCFIHISSTRTAAKPGAKRRLRTAASRAPGVRTHTQLGFVREAVRAGLTWLPEAFPAGEPGGWSPPSPCYLNTGHPPPQTHNPRSESPGAASPWPGPSA
Nucleotide Sequence ATGTGCTTTATACACATCAGCTCCACTAGGACTGCTGCAAAACCAGGCGCGAAGCGTCGCCTGAGAACAGCAGCTTCTAGGGCCCCTGGGGTACGCACCCACACGCAGCTGGGTTTTGTGCGAGAGGCAGTGAGAGCCGGGCTGACCTGGCTTCCCGAGGCATTCCCTGCAGGGGAACCAGGGGGGTGGAGCCCACCCTCCCCGTGCTATCTGAACACCGGCCATCCCCCTCCCCAAACCCACAACCCCAGGAGTGAGAGCCCCGGCGCAGCCTCACCGTGGCCAGGTCCTTCTGCGTAA
CircID chr9:136862979|136863341
ORF Type ORF4
Protein Length 69
Nucleotide Length 210
Protein Sequence MATVRLRRGSHSWGCGFGEGDGRCSDSTGRVGSTPLVPLQGMPREARSARLSLPLAQNPAACGCVPQGP
Nucleotide Sequence CTGGCCACGGTGAGGCTGCGCCGGGGCTCTCACTCCTGGGGTTGTGGGTTTGGGGAGGGGGATGGCCGGTGTTCAGATAGCACGGGGAGGGTGGGCTCCACCCCCCTGGTTCCCCTGCAGGGAATGCCTCGGGAAGCCAGGTCAGCCCGGCTCTCACTGCCTCTCGCACAAAACCCAGCTGCGTGTGGGTGCGTACCCCAGGGGCCCTAG
CircID chr9:136862979|136863341
ORF Type ORF5
Protein Length 89
Nucleotide Length 267
Protein Sequence MGRGMAGVQIARGGWAPPPWFPCRECLGKPGQPGSHCLSHKTQLRVGAYPRGPRSCCSQATLRAWFCSSPSGADVYKAHLLFRKSMRSH
Nucleotide Sequence TTGGGGAGGGGGATGGCCGGTGTTCAGATAGCACGGGGAGGGTGGGCTCCACCCCCCTGGTTCCCCTGCAGGGAATGCCTCGGGAAGCCAGGTCAGCCCGGCTCTCACTGCCTCTCGCACAAAACCCAGCTGCGTGTGGGTGCGTACCCCAGGGGCCCTAGAAGCTGCTGTTCTCAGGCGACGCTTCGCGCCTGGTTTTGCAGCAGTCCTAGTGGAGCTGATGTGTATAAAGCACATCTTCTCTTTAGAAAATCAATGAGAAGCCAC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab