CircRNA Information

General Information
circRNA Basic Information
CircID chr9:137039737|137039862
Strand +
CircType exon
Host Gene ENSG00000107281.8;
Algorism CIRI2;
Sequence CGGGGAAATGGAGGTGCGCAACCCTCTGTTCGACCACGCCGCACTGTCCGCGCCCCTGCCGGCCCCCAGCTCACCGCCTGCACTGCCATGACCTGGAGGCAGACAGACGCCCACCTGCTCCCCGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:137039737|137039862 hsa-miR-148a-5p 0 0 1
chr9:137039737|137039862 hsa-miR-148a-3p 0 0 1
chr9:137039737|137039862 hsa-miR-34a-5p 0 0 1
chr9:137039737|137039862 hsa-miR-34a-3p 0 0 1
chr9:137039737|137039862 hsa-miR-152-5p 0 0 1
chr9:137039737|137039862 hsa-miR-152-3p 0 0 1
chr9:137039737|137039862 hsa-miR-136-5p 0 0 1
chr9:137039737|137039862 hsa-miR-136-3p 0 0 1
chr9:137039737|137039862 hsa-miR-148b-5p 0 0 1
chr9:137039737|137039862 hsa-miR-148b-3p 0 0 1
chr9:137039737|137039862 hsa-miR-346 0 0 1
chr9:137039737|137039862 hsa-miR-449a 1 0 1
chr9:137039737|137039862 hsa-miR-558 0 0 1
chr9:137039737|137039862 hsa-miR-585-5p 0 0 1
chr9:137039737|137039862 hsa-miR-585-3p 0 0 1
chr9:137039737|137039862 hsa-miR-632 0 0 1
chr9:137039737|137039862 hsa-miR-637 1 0 1
chr9:137039737|137039862 hsa-miR-449b-5p 0 0 1
chr9:137039737|137039862 hsa-miR-449b-3p 0 0 1
chr9:137039737|137039862 hsa-miR-541-5p 0 0 1
chr9:137039737|137039862 hsa-miR-541-3p 0 0 1
chr9:137039737|137039862 hsa-miR-939-5p 0 0 1
chr9:137039737|137039862 hsa-miR-939-3p 0 0 1
chr9:137039737|137039862 hsa-miR-542-5p 0 0 1
chr9:137039737|137039862 hsa-miR-296-3p 0 0 1
chr9:137039737|137039862 hsa-miR-654-5p 0 0 1
chr9:137039737|137039862 hsa-miR-1207-5p 1 0 1
chr9:137039737|137039862 hsa-miR-34c-5p 0 0 1
chr9:137039737|137039862 hsa-miR-1268 0 0 1
chr9:137039737|137039862 hsa-miR-608 1 0 0
chr9:137039737|137039862 hsa-miR-663a 1 0 0
chr9:137039737|137039862 hsa-miR-762 1 0 0
chr9:137039737|137039862 hsa-miR-1183 1 0 0
chr9:137039737|137039862 hsa-miR-1268a 1 0 0
chr9:137039737|137039862 hsa-miR-2861 1 0 0
chr9:137039737|137039862 hsa-miR-3138 1 0 0
chr9:137039737|137039862 hsa-miR-3196 1 0 0
chr9:137039737|137039862 hsa-miR-3665 1 0 0
chr9:137039737|137039862 hsa-miR-3936 1 0 0
chr9:137039737|137039862 hsa-miR-3937 1 0 0
chr9:137039737|137039862 hsa-miR-1268b 1 0 0
chr9:137039737|137039862 hsa-miR-4466 1 0 0
chr9:137039737|137039862 hsa-miR-4479 1 0 0
chr9:137039737|137039862 hsa-miR-4488 1 0 0
chr9:137039737|137039862 hsa-miR-4498 1 0 0
chr9:137039737|137039862 hsa-miR-3960 1 0 0
chr9:137039737|137039862 hsa-miR-4651 1 0 0
chr9:137039737|137039862 hsa-miR-4656 1 0 0
chr9:137039737|137039862 hsa-miR-4688 1 0 0
chr9:137039737|137039862 hsa-miR-4706 1 0 0
chr9:137039737|137039862 hsa-miR-4734 1 0 0
chr9:137039737|137039862 hsa-miR-5572 1 0 0
chr9:137039737|137039862 hsa-miR-5787 1 0 0
chr9:137039737|137039862 hsa-miR-6081 1 0 0
chr9:137039737|137039862 hsa-miR-6085 1 0 0
chr9:137039737|137039862 hsa-miR-6090 1 0 0
chr9:137039737|137039862 hsa-miR-7704 1 0 0
chr9:137039737|137039862 hsa-miR-8072 1 0 0
chr9:137039737|137039862 hsa-miR-8089 1 0 0
chr9:137039737|137039862 hsa-miR-4731-5p 1 0 0
chr9:137039737|137039862 hsa-miR-3150a-3p 1 0 0
chr9:137039737|137039862 hsa-miR-6799-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6089 1 0 0
chr9:137039737|137039862 hsa-miR-4722-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6727-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6732-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6805-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6798-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6782-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6786-5p 1 0 0
chr9:137039737|137039862 hsa-miR-1908-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6771-5p 1 0 0
chr9:137039737|137039862 hsa-miR-4690-5p 1 0 0
chr9:137039737|137039862 hsa-miR-4743-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6824-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6789-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6781-5p 1 0 0
chr9:137039737|137039862 hsa-miR-7112-5p 1 0 0
chr9:137039737|137039862 hsa-miR-4746-3p 1 0 0
chr9:137039737|137039862 hsa-miR-4750-5p 1 0 0
chr9:137039737|137039862 hsa-miR-2277-5p 1 0 0
chr9:137039737|137039862 hsa-miR-10400-5p 1 0 0
chr9:137039737|137039862 hsa-miR-4763-3p 1 0 0
chr9:137039737|137039862 hsa-miR-6787-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6816-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6775-5p 1 0 0
chr9:137039737|137039862 hsa-miR-1343-5p 1 0 0
chr9:137039737|137039862 hsa-miR-5001-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6726-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6737-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6743-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6756-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6803-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6819-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6851-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6722-3p 1 0 0
chr9:137039737|137039862 hsa-miR-6751-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6763-5p 1 0 0
chr9:137039737|137039862 hsa-miR-3620-5p 1 0 0
chr9:137039737|137039862 hsa-miR-10396b-5p 1 0 0
chr9:137039737|137039862 hsa-miR-1237-5p 1 0 0
chr9:137039737|137039862 hsa-miR-1909-3p 1 0 0
chr9:137039737|137039862 hsa-miR-328-5p 1 0 0
chr9:137039737|137039862 hsa-miR-449c-5p 1 0 0
chr9:137039737|137039862 hsa-miR-4649-5p 1 0 0
chr9:137039737|137039862 hsa-miR-4749-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6729-5p 1 0 0
chr9:137039737|137039862 hsa-miR-675-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6777-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6846-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6848-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6889-5p 1 0 0
chr9:137039737|137039862 hsa-miR-4697-5p 1 0 0
chr9:137039737|137039862 hsa-miR-4758-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6511b-5p 1 0 0
chr9:137039737|137039862 hsa-miR-6791-3p 1 0 0
chr9:137039737|137039862 hsa-miR-4667-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr9:137039737|137039862
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MEVRNPLFDHAALSAPLPAPSSPPALP
Nucleotide Sequence ATGGAGGTGCGCAACCCTCTGTTCGACCACGCCGCACTGTCCGCGCCCCTGCCGGCCCCCAGCTCACCGCCTGCACTGCCATGA
CircID chr9:137039737|137039862
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MPPGHGSAGGELGAGRGADSAAWSNRGLRTSISP
Nucleotide Sequence CTGCCTCCAGGTCATGGCAGTGCAGGCGGTGAGCTGGGGGCCGGCAGGGGCGCGGACAGTGCGGCGTGGTCGAACAGAGGGTTGCGCACCTCCATTTCCCCG
CircID chr9:137039737|137039862
ORF Type ORF3
Protein Length 29
Nucleotide Length 87
Protein Sequence MAVQAVSWGPAGARTVRRGRTEGCAPPFP
Nucleotide Sequence ATGGCAGTGCAGGCGGTGAGCTGGGGGCCGGCAGGGGCGCGGACAGTGCGGCGTGGTCGAACAGAGGGTTGCGCACCTCCATTTCCC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab