CircRNA Information

General Information
circRNA Basic Information
CircID chr9:137108758|137108895
Strand -
CircType exon
Host Gene ENSG00000177239.13;
Algorism CIRI2;
Sequence AAGTGAGGCCGTCAGTCTTGGTGTGATGCGGGGTGGGCTGGGCCGCTGGAGCCTCCGCCTGCTTCCTCCAGAAGACACGAATCATGACTCACGATTGCTGAAGCCTGAGCAGGTCTCTGTGGGCCGACCAGAGGGGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:137108758|137108895 hsa-miR-187-5p 0 0 1
chr9:137108758|137108895 hsa-miR-187-3p 0 0 1
chr9:137108758|137108895 hsa-miR-433-5p 0 0 1
chr9:137108758|137108895 hsa-miR-433-3p 0 0 1
chr9:137108758|137108895 hsa-miR-484 0 0 1
chr9:137108758|137108895 hsa-miR-545-5p 0 0 1
chr9:137108758|137108895 hsa-miR-545-3p 0 0 1
chr9:137108758|137108895 hsa-miR-658 0 0 1
chr9:137108758|137108895 hsa-miR-766-5p 0 0 1
chr9:137108758|137108895 hsa-miR-766-3p 0 0 1
chr9:137108758|137108895 hsa-miR-765 0 0 1
chr9:137108758|137108895 hsa-miR-1228-5p 0 0 1
chr9:137108758|137108895 hsa-miR-1228-3p 0 0 1
chr9:137108758|137108895 hsa-miR-1299 0 0 1
chr9:137108758|137108895 hsa-miR-769-5p 0 1 1
chr9:137108758|137108895 hsa-miR-767-3p 0 0 1
chr9:137108758|137108895 hsa-miR-516b 0 0 1
chr9:137108758|137108895 hsa-miR-220a 0 0 1
chr9:137108758|137108895 hsa-miR-3937 0 1 0
chr9:137108758|137108895 hsa-miR-4488 1 0 0
chr9:137108758|137108895 hsa-miR-4513 0 1 0
chr9:137108758|137108895 hsa-miR-4730 1 0 0
chr9:137108758|137108895 hsa-miR-4739 1 0 0
chr9:137108758|137108895 hsa-miR-4767 1 0 0
chr9:137108758|137108895 hsa-miR-5685 0 1 0
chr9:137108758|137108895 hsa-miR-6075 0 1 0
chr9:137108758|137108895 hsa-miR-12127 1 0 0
chr9:137108758|137108895 hsa-miR-6822-3p 1 0 0
chr9:137108758|137108895 hsa-miR-25-5p 0 1 0
chr9:137108758|137108895 hsa-miR-6089 1 0 0
chr9:137108758|137108895 hsa-miR-7847-3p 0 1 0
chr9:137108758|137108895 hsa-miR-3180-3p 1 0 0
chr9:137108758|137108895 hsa-miR-2467-5p 0 1 0
chr9:137108758|137108895 hsa-miR-4711-3p 0 1 0
chr9:137108758|137108895 hsa-miR-3934-3p 1 1 0
chr9:137108758|137108895 hsa-miR-1908-3p 1 0 0
chr9:137108758|137108895 hsa-miR-4690-5p 0 1 0
chr9:137108758|137108895 hsa-miR-937-5p 1 0 0
chr9:137108758|137108895 hsa-miR-516b-5p 0 1 0
chr9:137108758|137108895 hsa-miR-2276-5p 0 1 0
chr9:137108758|137108895 hsa-miR-3620-3p 0 1 0
chr9:137108758|137108895 hsa-miR-3127-3p 1 0 0
chr9:137108758|137108895 hsa-miR-4745-3p 1 0 0
chr9:137108758|137108895 hsa-miR-10392-3p 1 0 0
chr9:137108758|137108895 hsa-miR-6824-3p 0 1 0
chr9:137108758|137108895 hsa-miR-6764-3p 0 1 0
chr9:137108758|137108895 hsa-miR-499a-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr9:137108758|137108895
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence MRGGLGRWSLRLLPPEDTNHDSRLLKPEQVSVGRPEG
Nucleotide Sequence ATGCGGGGTGGGCTGGGCCGCTGGAGCCTCCGCCTGCTTCCTCCAGAAGACACGAATCATGACTCACGATTGCTGAAGCCTGAGCAGGTCTCTGTGGGCCGACCAGAGGGG

CircID chr9:137108758|137108895
ORF Type ORF2
Protein Length 39
Nucleotide Length 120
Protein Sequence MVGPQRPAQASAIVSHDSCLLEEAGGGSSGPAHPASHQD
Nucleotide Sequence CTGGTCGGCCCACAGAGACCTGCTCAGGCTTCAGCAATCGTGAGTCATGATTCGTGTCTTCTGGAGGAAGCAGGCGGAGGCTCCAGCGGCCCAGCCCACCCCGCATCACACCAAGACTGA

CircID chr9:137108758|137108895
ORF Type ORF3
Protein Length 28
Nucleotide Length 84
Protein Sequence MIRVFWRKQAEAPAAQPTPHHTKTDGLT
Nucleotide Sequence ATGATTCGTGTCTTCTGGAGGAAGCAGGCGGAGGCTCCAGCGGCCCAGCCCACCCCGCATCACACCAAGACTGACGGCCTCACT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites