CircRNA Information

General Information
circRNA Basic Information
CircID chr9:137114258|137114547
Strand -
CircType exon
Host Gene ENSG00000176978.12;
Algorism CIRI2;
Sequence CAGTAGAGCCCCCCGCTCGGCCGCCAGCTCCGCGACGAAGGCCGAGTTGTTGGCGAAGGCCCACACGTCGCCCTCGTTCCCAGTGTAGAAGAAGATGGGCCCCTCGCCCCGGACCCAGAACCTGTCTGTGGGGAGGGCGGATGAGGCGAGGGTGCCGGGGGGCGGCGGGACGGCGGGGGCGGCCGGGCCGGGGCCGGGGTCTCACCCGACACCAGGAAGCGCTGAGGGAAGGTCTTGTTGCCGAAGCGCTCGAAGTTGAAGTGGTCCAGACGCTGCTGGAAGAAGCGCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:137114258|137114547 hsa-miR-422a 0 0 1
chr9:137114258|137114547 hsa-miR-503-5p 0 0 1
chr9:137114258|137114547 hsa-miR-503-3p 0 0 1
chr9:137114258|137114547 hsa-miR-1181 1 0 1
chr9:137114258|137114547 hsa-miR-1234-3p 0 0 1
chr9:137114258|137114547 hsa-miR-1281 0 0 1
chr9:137114258|137114547 hsa-miR-1292-5p 0 0 1
chr9:137114258|137114547 hsa-miR-1292-3p 0 0 1
chr9:137114258|137114547 hsa-miR-1324 0 0 1
chr9:137114258|137114547 hsa-miR-1234 0 0 1
chr9:137114258|137114547 hsa-miR-769-5p 0 0 1
chr9:137114258|137114547 hsa-miR-423-5p 0 0 1
chr9:137114258|137114547 hsa-miR-338-3p 0 0 1
chr9:137114258|137114547 hsa-miR-516a-3p 0 0 1
chr9:137114258|137114547 hsa-miR-642 0 0 1
chr9:137114258|137114547 hsa-miR-378 0 0 1
chr9:137114258|137114547 hsa-miR-572 1 0 0
chr9:137114258|137114547 hsa-miR-637 1 0 0
chr9:137114258|137114547 hsa-miR-762 1 0 0
chr9:137114258|137114547 hsa-miR-663b 1 0 0
chr9:137114258|137114547 hsa-miR-1469 1 0 0
chr9:137114258|137114547 hsa-miR-1470 1 0 0
chr9:137114258|137114547 hsa-miR-1538 1 1 0
chr9:137114258|137114547 hsa-miR-1913 1 1 0
chr9:137114258|137114547 hsa-miR-718 1 0 0
chr9:137114258|137114547 hsa-miR-2861 1 0 0
chr9:137114258|137114547 hsa-miR-4313 1 0 0
chr9:137114258|137114547 hsa-miR-4292 1 0 0
chr9:137114258|137114547 hsa-miR-3937 1 0 0
chr9:137114258|137114547 hsa-miR-4440 1 1 0
chr9:137114258|137114547 hsa-miR-4467 1 0 0
chr9:137114258|137114547 hsa-miR-4487 0 1 0
chr9:137114258|137114547 hsa-miR-4530 0 1 0
chr9:137114258|137114547 hsa-miR-1587 1 0 0
chr9:137114258|137114547 hsa-miR-4641 1 0 0
chr9:137114258|137114547 hsa-miR-4656 1 0 0
chr9:137114258|137114547 hsa-miR-4721 1 0 0
chr9:137114258|137114547 hsa-miR-5787 1 0 0
chr9:137114258|137114547 hsa-miR-6090 1 0 0
chr9:137114258|137114547 hsa-miR-8089 1 1 0
chr9:137114258|137114547 hsa-miR-9901 1 0 0
chr9:137114258|137114547 hsa-miR-12115 1 0 0
chr9:137114258|137114547 hsa-miR-103a-2-5p 0 1 0
chr9:137114258|137114547 hsa-miR-196a-3p 0 1 0
chr9:137114258|137114547 hsa-miR-4731-5p 1 0 0
chr9:137114258|137114547 hsa-miR-4665-3p 1 0 0
chr9:137114258|137114547 hsa-miR-6836-3p 1 0 0
chr9:137114258|137114547 hsa-miR-210-5p 1 0 0
chr9:137114258|137114547 hsa-miR-6820-5p 1 0 0
chr9:137114258|137114547 hsa-miR-6875-3p 1 1 0
chr9:137114258|137114547 hsa-miR-6840-5p 1 0 0
chr9:137114258|137114547 hsa-miR-6727-5p 0 1 0
chr9:137114258|137114547 hsa-miR-874-3p 1 0 0
chr9:137114258|137114547 hsa-miR-3189-5p 1 0 0
chr9:137114258|137114547 hsa-miR-1915-5p 1 0 0
chr9:137114258|137114547 hsa-miR-7108-5p 1 0 0
chr9:137114258|137114547 hsa-miR-6742-5p 1 0 0
chr9:137114258|137114547 hsa-miR-6716-5p 1 0 0
chr9:137114258|137114547 hsa-miR-4655-3p 1 0 0
chr9:137114258|137114547 hsa-miR-6850-5p 1 0 0
chr9:137114258|137114547 hsa-miR-939-3p 1 0 0
chr9:137114258|137114547 hsa-miR-6763-3p 1 1 0
chr9:137114258|137114547 hsa-miR-7108-3p 1 0 0
chr9:137114258|137114547 hsa-miR-1247-5p 1 1 0
chr9:137114258|137114547 hsa-miR-4707-3p 1 0 0
chr9:137114258|137114547 hsa-miR-1908-3p 1 1 0
chr9:137114258|137114547 hsa-miR-6803-3p 1 1 0
chr9:137114258|137114547 hsa-miR-7113-3p 1 0 0
chr9:137114258|137114547 hsa-miR-3667-3p 1 0 0
chr9:137114258|137114547 hsa-miR-6749-5p 1 0 0
chr9:137114258|137114547 hsa-miR-4787-5p 1 0 0
chr9:137114258|137114547 hsa-miR-5196-3p 0 1 0
chr9:137114258|137114547 hsa-miR-6786-3p 1 0 0
chr9:137114258|137114547 hsa-miR-6769a-3p 1 0 0
chr9:137114258|137114547 hsa-miR-6825-3p 1 0 0
chr9:137114258|137114547 hsa-miR-6870-3p 0 1 0
chr9:137114258|137114547 hsa-miR-4707-5p 1 1 0
chr9:137114258|137114547 hsa-miR-6743-3p 1 0 0
chr9:137114258|137114547 hsa-miR-1307-3p 1 0 0
chr9:137114258|137114547 hsa-miR-6730-3p 1 0 0
chr9:137114258|137114547 hsa-miR-339-3p 1 0 0
chr9:137114258|137114547 hsa-miR-4778-3p 0 1 0
chr9:137114258|137114547 hsa-miR-4632-3p 1 1 0
chr9:137114258|137114547 hsa-miR-4749-3p 1 0 0
chr9:137114258|137114547 hsa-miR-6795-3p 0 1 0
chr9:137114258|137114547 hsa-miR-6880-3p 1 0 0
chr9:137114258|137114547 hsa-miR-1199-3p 1 0 0
chr9:137114258|137114547 hsa-miR-188-3p 0 1 0
chr9:137114258|137114547 hsa-miR-6734-3p 0 1 0
chr9:137114258|137114547 hsa-miR-1249-3p 1 0 0
chr9:137114258|137114547 hsa-miR-6729-3p 1 0 0
chr9:137114258|137114547 hsa-miR-6789-3p 1 1 0
chr9:137114258|137114547 hsa-miR-6733-3p 0 1 0
chr9:137114258|137114547 hsa-miR-4524b-3p 0 1 0
chr9:137114258|137114547 hsa-miR-10400-5p 1 0 0
chr9:137114258|137114547 hsa-miR-5001-5p 1 0 0
chr9:137114258|137114547 hsa-miR-6726-5p 1 0 0
chr9:137114258|137114547 hsa-miR-6743-5p 1 0 0
chr9:137114258|137114547 hsa-miR-320a-5p 1 1 0
chr9:137114258|137114547 hsa-miR-3620-5p 1 0 0
chr9:137114258|137114547 hsa-miR-10392-5p 0 1 0
chr9:137114258|137114547 hsa-miR-10396a-5p 1 0 0
chr9:137114258|137114547 hsa-miR-10396b-5p 1 0 0
chr9:137114258|137114547 hsa-miR-4649-5p 1 1 0
chr9:137114258|137114547 hsa-miR-4745-3p 0 1 0
chr9:137114258|137114547 hsa-miR-6729-5p 0 1 0
chr9:137114258|137114547 hsa-miR-6846-5p 1 0 0
chr9:137114258|137114547 hsa-miR-6848-5p 1 0 0
chr9:137114258|137114547 hsa-miR-6885-5p 0 1 0
chr9:137114258|137114547 hsa-miR-939-5p 1 0 0
chr9:137114258|137114547 hsa-miR-10396a-3p 1 1 0
chr9:137114258|137114547 hsa-miR-10396b-3p 1 1 0
chr9:137114258|137114547 hsa-miR-1914-3p 1 0 0
chr9:137114258|137114547 hsa-miR-4700-5p 0 1 0
chr9:137114258|137114547 hsa-miR-324-3p 1 0 0
chr9:137114258|137114547 hsa-miR-4646-5p 0 1 0
chr9:137114258|137114547 hsa-miR-6893-3p 1 0 0
chr9:137114258|137114547 hsa-miR-10401-3p 1 1 0
chr9:137114258|137114547 hsa-miR-6810-3p 1 1 0
chr9:137114258|137114547 hsa-miR-6775-3p 1 1 0
chr9:137114258|137114547 hsa-miR-10392-3p 1 1 0
chr9:137114258|137114547 hsa-miR-6891-3p 0 1 0
chr9:137114258|137114547 hsa-miR-520f-3p 0 1 0
chr9:137114258|137114547 hsa-miR-6744-3p 1 0 0
chr9:137114258|137114547 hsa-miR-128-2-5p 1 0 0
chr9:137114258|137114547 hsa-miR-103a-1-5p 0 1 0
chr9:137114258|137114547 hsa-miR-6833-3p 0 1 0
chr9:137114258|137114547 hsa-miR-4659a-3p 0 1 0
chr9:137114258|137114547 hsa-miR-302b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr9:137114258|137114547
ORF Type ORF1
Protein Length 54
Nucleotide Length 165
Protein Sequence MGPSPRTQNLSVGRADEARVPGGGGTAGAAGPGPGSHPTPGSAEGRSCCRSARS
Nucleotide Sequence ATGGGCCCCTCGCCCCGGACCCAGAACCTGTCTGTGGGGAGGGCGGATGAGGCGAGGGTGCCGGGGGGCGGCGGGACGGCGGGGGCGGCCGGGCCGGGGCCGGGGTCTCACCCGACACCAGGAAGCGCTGAGGGAAGGTCTTGTTGCCGAAGCGCTCGAAGTTGA

CircID chr9:137114258|137114547
ORF Type ORF2
Protein Length 55
Nucleotide Length 165
Protein Sequence MWGGRMRRGCRGAAGRRGRPGRGRGLTRHQEALREGLVAEALEVEVVQTLLEEAL
Nucleotide Sequence CTGTGGGGAGGGCGGATGAGGCGAGGGTGCCGGGGGGCGGCGGGACGGCGGGGGCGGCCGGGCCGGGGCCGGGGTCTCACCCGACACCAGGAAGCGCTGAGGGAAGGTCTTGTTGCCGAAGCGCTCGAAGTTGAAGTGGTCCAGACGCTGCTGGAAGAAGCGCTC

CircID chr9:137114258|137114547
ORF Type ORF3
Protein Length 89
Nucleotide Length 267
Protein Sequence MDHFNFERFGNKTFPQRFLVSGETPAPARPPPPSRRPPAPSPHPPSPQTGSGSGARGPSSSTLGTRATCGPSPTTRPSSRSWRPSGGLY
Nucleotide Sequence CTGGACCACTTCAACTTCGAGCGCTTCGGCAACAAGACCTTCCCTCAGCGCTTCCTGGTGTCGGGTGAGACCCCGGCCCCGGCCCGGCCGCCCCCGCCGTCCCGCCGCCCCCCGGCACCCTCGCCTCATCCGCCCTCCCCACAGACAGGTTCTGGGTCCGGGGCGAGGGGCCCATCTTCTTCTACACTGGGAACGAGGGCGACGTGTGGGCCTTCGCCAACAACTCGGCCTTCGTCGCGGAGCTGGCGGCCGAGCGGGGGGCTCTAC

CircID chr9:137114258|137114547
ORF Type ORF4
Protein Length 39
Nucleotide Length 117
Protein Sequence MGPGRGAHLLLHWERGRRVGLRQQLGLRRGAGGRAGGST
Nucleotide Sequence CTGGGTCCGGGGCGAGGGGCCCATCTTCTTCTACACTGGGAACGAGGGCGACGTGTGGGCCTTCGCCAACAACTCGGCCTTCGTCGCGGAGCTGGCGGCCGAGCGGGGGGCTCTACT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites