CircRNA Information

General Information
circRNA Basic Information
CircID chr9:137189883|137190096
Strand +
CircType exon
Host Gene ENSG00000176101.10;
Algorism CIRI2;
Sequence CCCCGGGTGGGCTGTGCCCTGGGCTTGTCACTGATGCCAGTGGAGGCTGGCACCTGCCCCTCTCGGCACCTGAGACAGTGAGGGAAGGTAGCTGCTGCCGTGAAGAACAAAGATGCTCTGAGCACACACTTGCTGGGGCTGAGCTGAGGGGCACACGGAGGCAGGCCCTGCCCGTGGTCTGGTCAGCTGTCCCTGCCGCCGCTACTTTTCTGGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:137189883|137190096 hsa-miR-375-5p 0 0 1
chr9:137189883|137190096 hsa-miR-375-3p 0 0 1
chr9:137189883|137190096 hsa-miR-412-5p 0 0 1
chr9:137189883|137190096 hsa-miR-412-3p 0 0 1
chr9:137189883|137190096 hsa-miR-562 0 0 1
chr9:137189883|137190096 hsa-miR-595 0 0 1
chr9:137189883|137190096 hsa-miR-646 0 1 1
chr9:137189883|137190096 hsa-miR-1202 0 1 1
chr9:137189883|137190096 hsa-miR-1208 0 0 1
chr9:137189883|137190096 hsa-miR-548n 0 0 1
chr9:137189883|137190096 hsa-miR-1266-5p 0 0 1
chr9:137189883|137190096 hsa-miR-1266-3p 0 0 1
chr9:137189883|137190096 hsa-miR-125a-3p 0 0 1
chr9:137189883|137190096 hsa-miR-486-3p 0 1 1
chr9:137189883|137190096 hsa-miR-423-5p 0 1 1
chr9:137189883|137190096 hsa-miR-1207-5p 1 1 1
chr9:137189883|137190096 hsa-miR-642 0 0 1
chr9:137189883|137190096 hsa-miR-612 1 0 0
chr9:137189883|137190096 hsa-miR-764 0 1 0
chr9:137189883|137190096 hsa-miR-3161 0 1 0
chr9:137189883|137190096 hsa-miR-3196 1 0 0
chr9:137189883|137190096 hsa-miR-3665 0 1 0
chr9:137189883|137190096 hsa-miR-4467 1 0 0
chr9:137189883|137190096 hsa-miR-4479 1 0 0
chr9:137189883|137190096 hsa-miR-4512 0 1 0
chr9:137189883|137190096 hsa-miR-3960 1 1 0
chr9:137189883|137190096 hsa-miR-3972 0 1 0
chr9:137189883|137190096 hsa-miR-4688 0 1 0
chr9:137189883|137190096 hsa-miR-5190 0 1 0
chr9:137189883|137190096 hsa-miR-5690 0 1 0
chr9:137189883|137190096 hsa-miR-6069 1 0 0
chr9:137189883|137190096 hsa-miR-8072 0 1 0
chr9:137189883|137190096 hsa-miR-22-5p 0 1 0
chr9:137189883|137190096 hsa-miR-211-3p 0 1 0
chr9:137189883|137190096 hsa-miR-6747-3p 0 1 0
chr9:137189883|137190096 hsa-miR-6836-3p 0 1 0
chr9:137189883|137190096 hsa-miR-6867-5p 0 1 0
chr9:137189883|137190096 hsa-miR-6721-5p 0 1 0
chr9:137189883|137190096 hsa-miR-6787-3p 0 1 0
chr9:137189883|137190096 hsa-miR-3126-5p 0 1 0
chr9:137189883|137190096 hsa-miR-3194-5p 0 1 0
chr9:137189883|137190096 hsa-miR-6882-3p 1 1 0
chr9:137189883|137190096 hsa-miR-4640-5p 1 0 0
chr9:137189883|137190096 hsa-miR-1908-5p 1 1 0
chr9:137189883|137190096 hsa-miR-6789-5p 1 0 0
chr9:137189883|137190096 hsa-miR-7112-5p 1 1 0
chr9:137189883|137190096 hsa-miR-3940-3p 1 1 0
chr9:137189883|137190096 hsa-miR-6837-3p 0 1 0
chr9:137189883|137190096 hsa-miR-3605-3p 0 1 0
chr9:137189883|137190096 hsa-miR-214-3p 1 0 0
chr9:137189883|137190096 hsa-miR-4749-3p 0 1 0
chr9:137189883|137190096 hsa-miR-6734-3p 1 1 0
chr9:137189883|137190096 hsa-miR-10400-5p 1 0 0
chr9:137189883|137190096 hsa-miR-4763-3p 1 1 0
chr9:137189883|137190096 hsa-miR-6787-5p 1 0 0
chr9:137189883|137190096 hsa-miR-6743-5p 0 1 0
chr9:137189883|137190096 hsa-miR-1915-3p 0 1 0
chr9:137189883|137190096 hsa-miR-6836-5p 0 1 0
chr9:137189883|137190096 hsa-miR-328-5p 1 0 0
chr9:137189883|137190096 hsa-miR-4749-5p 1 1 0
chr9:137189883|137190096 hsa-miR-3085-5p 0 1 0
chr9:137189883|137190096 hsa-miR-7843-5p 0 1 0
chr9:137189883|137190096 hsa-miR-6837-5p 0 1 0
chr9:137189883|137190096 hsa-miR-6764-5p 0 1 0
chr9:137189883|137190096 hsa-miR-4690-3p 0 1 0
chr9:137189883|137190096 hsa-miR-5588-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr9:137189883|137190096
ORF Type ORF1
Protein Length 67
Nucleotide Length 201
Protein Sequence MCPGLVTDASGGWHLPLSAPETVREGSCCREEQRCSEHTLAGAELRGTRRQALPVVWSAVPAAATFL
Nucleotide Sequence CTGTGCCCTGGGCTTGTCACTGATGCCAGTGGAGGCTGGCACCTGCCCCTCTCGGCACCTGAGACAGTGAGGGAAGGTAGCTGCTGCCGTGAAGAACAAAGATGCTCTGAGCACACACTTGCTGGGGCTGAGCTGAGGGGCACACGGAGGCAGGCCCTGCCCGTGGTCTGGTCAGCTGTCCCTGCCGCCGCTACTTTTCTG

CircID chr9:137189883|137190096
ORF Type ORF2
Protein Length 52
Nucleotide Length 159
Protein Sequence MTRPRAGPASVCPSAQPQQVCAQSIFVLHGSSYLPSLSQVPRGAGASLHWHQ
Nucleotide Sequence CTGACCAGACCACGGGCAGGGCCTGCCTCCGTGTGCCCCTCAGCTCAGCCCCAGCAAGTGTGTGCTCAGAGCATCTTTGTTCTTCACGGCAGCAGCTACCTTCCCTCACTGTCTCAGGTGCCGAGAGGGGCAGGTGCCAGCCTCCACTGGCATCAGTGA

CircID chr9:137189883|137190096
ORF Type ORF3
Protein Length 54
Nucleotide Length 162
Protein Sequence MPPCAPQLSPSKCVLRASLFFTAAATFPHCLRCREGQVPASTGISDKPRAQPTR
Nucleotide Sequence CTGCCTCCGTGTGCCCCTCAGCTCAGCCCCAGCAAGTGTGTGCTCAGAGCATCTTTGTTCTTCACGGCAGCAGCTACCTTCCCTCACTGTCTCAGGTGCCGAGAGGGGCAGGTGCCAGCCTCCACTGGCATCAGTGACAAGCCCAGGGCACAGCCCACCCGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites