CircRNA Information

General Information
circRNA Basic Information
CircID chr9:137243413|137243552
Strand -
CircType exon
Host Gene ENSG00000188229.5;
Algorism CIRI2;
Sequence ACGGGCGAGGGCATGGACGAGATGGAGTTCACCGAGGCCGAGAGCAACATGAATGACCTGGTGTCCGAGTACCAGCAGTACCAGGATGCCACAGCCGAGGAGGAGGGCGAGTTCGAGGAGGAGGCTGAGGAGGAGGTGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:137243413|137243552 hsa-miR-1234-3p 0 0 1
chr9:137243413|137243552 hsa-miR-1249-5p 0 0 1
chr9:137243413|137243552 hsa-miR-1249-3p 0 0 1
chr9:137243413|137243552 hsa-miR-1307-5p 0 0 1
chr9:137243413|137243552 hsa-miR-1307-3p 0 0 1
chr9:137243413|137243552 hsa-miR-1234 0 0 1
chr9:137243413|137243552 hsa-miR-138 0 0 1
chr9:137243413|137243552 hsa-miR-1281 1 1 0
chr9:137243413|137243552 hsa-miR-4279 1 0 0
chr9:137243413|137243552 hsa-miR-3615 1 1 0
chr9:137243413|137243552 hsa-miR-3917 0 1 0
chr9:137243413|137243552 hsa-miR-4642 0 1 0
chr9:137243413|137243552 hsa-miR-5193 1 1 0
chr9:137243413|137243552 hsa-miR-7974 0 1 0
chr9:137243413|137243552 hsa-miR-11400 0 1 0
chr9:137243413|137243552 hsa-miR-138-5p 0 1 0
chr9:137243413|137243552 hsa-miR-6749-3p 1 0 0
chr9:137243413|137243552 hsa-miR-154-5p 0 1 0
chr9:137243413|137243552 hsa-miR-4665-3p 1 0 0
chr9:137243413|137243552 hsa-miR-133a-5p 0 1 0
chr9:137243413|137243552 hsa-miR-6881-3p 1 0 0
chr9:137243413|137243552 hsa-miR-3692-5p 0 1 0
chr9:137243413|137243552 hsa-miR-6726-3p 0 1 0
chr9:137243413|137243552 hsa-miR-6787-3p 1 0 0
chr9:137243413|137243552 hsa-miR-6845-3p 1 0 0
chr9:137243413|137243552 hsa-miR-877-3p 1 1 0
chr9:137243413|137243552 hsa-miR-6716-3p 1 1 0
chr9:137243413|137243552 hsa-miR-4436b-5p 1 0 0
chr9:137243413|137243552 hsa-miR-6884-3p 1 0 0
chr9:137243413|137243552 hsa-miR-939-3p 1 0 0
chr9:137243413|137243552 hsa-miR-6763-3p 1 0 0
chr9:137243413|137243552 hsa-miR-1908-3p 1 0 0
chr9:137243413|137243552 hsa-miR-5001-3p 1 0 0
chr9:137243413|137243552 hsa-miR-5196-3p 1 0 0
chr9:137243413|137243552 hsa-miR-4667-3p 0 1 0
chr9:137243413|137243552 hsa-miR-4733-3p 0 1 0
chr9:137243413|137243552 hsa-miR-1306-5p 1 1 0
chr9:137243413|137243552 hsa-miR-181b-5p 0 1 0
chr9:137243413|137243552 hsa-miR-1237-3p 1 0 0
chr9:137243413|137243552 hsa-miR-1236-3p 1 0 0
chr9:137243413|137243552 hsa-miR-4638-5p 1 1 0
chr9:137243413|137243552 hsa-miR-1238-3p 1 0 0
chr9:137243413|137243552 hsa-miR-6872-3p 0 1 0
chr9:137243413|137243552 hsa-miR-6880-3p 1 0 0
chr9:137243413|137243552 hsa-miR-676-5p 1 0 0
chr9:137243413|137243552 hsa-miR-320a-5p 1 1 0
chr9:137243413|137243552 hsa-miR-10392-5p 1 0 0
chr9:137243413|137243552 hsa-miR-6791-3p 1 1 0
chr9:137243413|137243552 hsa-miR-6877-3p 1 0 0
chr9:137243413|137243552 hsa-miR-2682-3p 1 0 0
chr9:137243413|137243552 hsa-miR-6756-3p 1 0 0
chr9:137243413|137243552 hsa-miR-6792-3p 1 1 0
chr9:137243413|137243552 hsa-miR-6805-3p 1 0 0
chr9:137243413|137243552 hsa-miR-6829-3p 1 1 0
chr9:137243413|137243552 hsa-miR-10392-3p 1 0 0
chr9:137243413|137243552 hsa-miR-6751-3p 1 0 0
chr9:137243413|137243552 hsa-miR-6744-3p 1 0 0
chr9:137243413|137243552 hsa-miR-6783-3p 1 0 0
chr9:137243413|137243552 hsa-miR-4691-5p 1 0 0
chr9:137243413|137243552 hsa-miR-6827-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr9:137243413|137243552
ORF Type ORF1
Protein Length 42
Nucleotide Length 126
Protein Sequence MDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFEEEAEEEV
Nucleotide Sequence ATGGACGAGATGGAGTTCACCGAGGCCGAGAGCAACATGAATGACCTGGTGTCCGAGTACCAGCAGTACCAGGATGCCACAGCCGAGGAGGAGGGCGAGTTCGAGGAGGAGGCTGAGGAGGAGGTG

CircID chr9:137243413|137243552
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence MTWCPSTSSTRMPQPRRRASSRRRLRRRW
Nucleotide Sequence ATGACCTGGTGTCCGAGTACCAGCAGTACCAGGATGCCACAGCCGAGGAGGAGGGCGAGTTCGAGGAGGAGGCTGAGGAGGAGGTGG

CircID chr9:137243413|137243552
ORF Type ORF3
Protein Length 28
Nucleotide Length 84
Protein Sequence MVLLVLGHQVIHVALGLGELHLVHALAR
Nucleotide Sequence CTGGTACTGCTGGTACTCGGACACCAGGTCATTCATGTTGCTCTCGGCCTCGGTGAACTCCATCTCGTCCATGCCCTCGCCCGT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites