CircRNA Information

General Information
circRNA Basic Information
CircID chr9:137448547|137448743
Strand +
CircType exon
Host Gene ENSG00000165802.18;
Algorism CIRI2;
Sequence CTCAGCCGGCGCCGGACCCGGTAGGGGCAGTCTGGGCAGCAGGAAGGAAGGGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGTGGGGCCTGCTCCCCATCCCCCCAAGCCCACCCAGCACTCTCATTGCTGCTGTTGAGTTCAGCTTTTACCAGCCTCAGTGTGGAGGCTCCATCCCAGCACACAGGCCTGGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:137448547|137448743 hsa-miR-15a-5p 0 0 1
chr9:137448547|137448743 hsa-miR-15a-3p 0 0 1
chr9:137448547|137448743 hsa-miR-15b-5p 0 0 1
chr9:137448547|137448743 hsa-miR-15b-3p 0 0 1
chr9:137448547|137448743 hsa-miR-195-5p 0 0 1
chr9:137448547|137448743 hsa-miR-195-3p 0 0 1
chr9:137448547|137448743 hsa-miR-320a-5p 0 0 1
chr9:137448547|137448743 hsa-miR-320a-3p 0 0 1
chr9:137448547|137448743 hsa-miR-370-5p 0 0 1
chr9:137448547|137448743 hsa-miR-370-3p 0 0 1
chr9:137448547|137448743 hsa-miR-424-5p 0 0 1
chr9:137448547|137448743 hsa-miR-424-3p 0 0 1
chr9:137448547|137448743 hsa-miR-497-5p 0 0 1
chr9:137448547|137448743 hsa-miR-497-3p 0 0 1
chr9:137448547|137448743 hsa-miR-421 0 0 1
chr9:137448547|137448743 hsa-miR-541-5p 0 0 1
chr9:137448547|137448743 hsa-miR-541-3p 0 0 1
chr9:137448547|137448743 hsa-miR-939-5p 0 0 1
chr9:137448547|137448743 hsa-miR-939-3p 0 0 1
chr9:137448547|137448743 hsa-miR-1293 0 0 1
chr9:137448547|137448743 hsa-miR-1249-5p 0 0 1
chr9:137448547|137448743 hsa-miR-1249-3p 0 0 1
chr9:137448547|137448743 hsa-miR-1275 0 0 1
chr9:137448547|137448743 hsa-miR-1252-5p 0 0 1
chr9:137448547|137448743 hsa-miR-1252-3p 0 0 1
chr9:137448547|137448743 hsa-miR-512-3p 0 0 1
chr9:137448547|137448743 hsa-miR-485-5p 1 1 1
chr9:137448547|137448743 hsa-miR-654-5p 0 0 1
chr9:137448547|137448743 hsa-miR-324-3p 0 0 1
chr9:137448547|137448743 hsa-miR-320b 0 1 1
chr9:137448547|137448743 hsa-miR-320c 0 1 1
chr9:137448547|137448743 hsa-miR-320d 0 1 1
chr9:137448547|137448743 hsa-miR-16 0 0 1
chr9:137448547|137448743 hsa-miR-608 1 0 0
chr9:137448547|137448743 hsa-miR-762 1 0 0
chr9:137448547|137448743 hsa-miR-1913 1 1 0
chr9:137448547|137448743 hsa-miR-4429 0 1 0
chr9:137448547|137448743 hsa-miR-4490 0 1 0
chr9:137448547|137448743 hsa-miR-4494 0 1 0
chr9:137448547|137448743 hsa-miR-4498 1 0 0
chr9:137448547|137448743 hsa-miR-4507 1 0 0
chr9:137448547|137448743 hsa-miR-4525 0 1 0
chr9:137448547|137448743 hsa-miR-1587 1 0 0
chr9:137448547|137448743 hsa-miR-4539 0 1 0
chr9:137448547|137448743 hsa-miR-5787 1 0 0
chr9:137448547|137448743 hsa-miR-6081 0 1 0
chr9:137448547|137448743 hsa-miR-6085 1 0 0
chr9:137448547|137448743 hsa-miR-6086 1 1 0
chr9:137448547|137448743 hsa-miR-9899 1 0 0
chr9:137448547|137448743 hsa-miR-12126 1 0 0
chr9:137448547|137448743 hsa-miR-18a-3p 1 0 0
chr9:137448547|137448743 hsa-miR-4731-5p 1 0 0
chr9:137448547|137448743 hsa-miR-6840-3p 1 1 0
chr9:137448547|137448743 hsa-miR-504-3p 1 0 0
chr9:137448547|137448743 hsa-miR-6765-5p 1 0 0
chr9:137448547|137448743 hsa-miR-133a-5p 0 1 0
chr9:137448547|137448743 hsa-miR-6861-5p 1 0 0
chr9:137448547|137448743 hsa-miR-6857-5p 0 1 0
chr9:137448547|137448743 hsa-miR-3692-3p 0 1 0
chr9:137448547|137448743 hsa-miR-6089 1 0 0
chr9:137448547|137448743 hsa-miR-874-5p 0 1 0
chr9:137448547|137448743 hsa-miR-6741-5p 1 0 0
chr9:137448547|137448743 hsa-miR-6842-3p 1 0 0
chr9:137448547|137448743 hsa-miR-5589-5p 1 1 0
chr9:137448547|137448743 hsa-miR-6776-5p 0 1 0
chr9:137448547|137448743 hsa-miR-1915-5p 1 0 0
chr9:137448547|137448743 hsa-miR-1288-3p 0 1 0
chr9:137448547|137448743 hsa-miR-6742-5p 1 0 0
chr9:137448547|137448743 hsa-miR-6871-5p 0 1 0
chr9:137448547|137448743 hsa-miR-3180-3p 1 0 0
chr9:137448547|137448743 hsa-miR-6796-5p 1 0 0
chr9:137448547|137448743 hsa-miR-6735-3p 1 1 0
chr9:137448547|137448743 hsa-miR-7109-5p 1 1 0
chr9:137448547|137448743 hsa-miR-1229-5p 1 0 0
chr9:137448547|137448743 hsa-miR-5001-3p 1 0 0
chr9:137448547|137448743 hsa-miR-296-3p 1 0 0
chr9:137448547|137448743 hsa-miR-6749-5p 1 1 0
chr9:137448547|137448743 hsa-miR-5010-5p 0 1 0
chr9:137448547|137448743 hsa-miR-7162-3p 1 0 0
chr9:137448547|137448743 hsa-miR-3191-3p 1 1 0
chr9:137448547|137448743 hsa-miR-6889-3p 0 1 0
chr9:137448547|137448743 hsa-miR-4758-3p 0 1 0
chr9:137448547|137448743 hsa-miR-3074-5p 0 1 0
chr9:137448547|137448743 hsa-miR-2114-3p 0 1 0
chr9:137448547|137448743 hsa-miR-6886-3p 1 1 0
chr9:137448547|137448743 hsa-miR-5002-3p 0 1 0
chr9:137448547|137448743 hsa-miR-6769b-5p 1 0 0
chr9:137448547|137448743 hsa-miR-6812-5p 1 0 0
chr9:137448547|137448743 hsa-miR-1343-5p 1 1 0
chr9:137448547|137448743 hsa-miR-3180 1 0 0
chr9:137448547|137448743 hsa-miR-5001-5p 1 0 0
chr9:137448547|137448743 hsa-miR-6726-5p 1 0 0
chr9:137448547|137448743 hsa-miR-6752-5p 0 1 0
chr9:137448547|137448743 hsa-miR-6756-5p 1 1 0
chr9:137448547|137448743 hsa-miR-6803-5p 1 0 0
chr9:137448547|137448743 hsa-miR-7110-5p 1 0 0
chr9:137448547|137448743 hsa-miR-6774-5p 1 0 0
chr9:137448547|137448743 hsa-miR-3620-5p 1 0 0
chr9:137448547|137448743 hsa-miR-328-5p 1 0 0
chr9:137448547|137448743 hsa-miR-4632-5p 1 0 0
chr9:137448547|137448743 hsa-miR-6795-5p 1 1 0
chr9:137448547|137448743 hsa-miR-6848-5p 1 0 0
chr9:137448547|137448743 hsa-miR-6887-5p 0 1 0
chr9:137448547|137448743 hsa-miR-4769-5p 0 1 0
chr9:137448547|137448743 hsa-miR-6891-5p 0 1 0
chr9:137448547|137448743 hsa-miR-6766-5p 1 1 0
chr9:137448547|137448743 hsa-miR-6791-5p 1 0 0
chr9:137448547|137448743 hsa-miR-6893-3p 0 1 0
chr9:137448547|137448743 hsa-miR-6756-3p 1 1 0
chr9:137448547|137448743 hsa-miR-6829-3p 0 1 0
chr9:137448547|137448743 hsa-miR-6529-3p 0 1 0
chr9:137448547|137448743 hsa-miR-6884-5p 1 1 0
chr9:137448547|137448743 hsa-miR-6838-5p 0 1 0
chr9:137448547|137448743 hsa-miR-1912-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr9:137448547|137448743
ORF Type ORF1
Protein Length 55
Nucleotide Length 165
Protein Sequence MGSRKEGRSVPSFRGGSGWGLLPIPPSPPSTLIAAVEFSFYQPQCGGSIPAHRPG
Nucleotide Sequence CTGGGCAGCAGGAAGGAAGGGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGTGGGGCCTGCTCCCCATCCCCCCAAGCCCACCCAGCACTCTCATTGCTGCTGTTGAGTTCAGCTTTTACCAGCCTCAGTGTGGAGGCTCCATCCCAGCACACAGGCCTGGG
CircID chr9:137448547|137448743
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MGGACSPSPQAHPALSLLLLSSAFTSLSVEAPSQHTGLG
Nucleotide Sequence CTGGGTGGGGCCTGCTCCCCATCCCCCCAAGCCCACCCAGCACTCTCATTGCTGCTGTTGAGTTCAGCTTTTACCAGCCTCAGTGTGGAGGCTCCATCCCAGCACACAGGCCTGGGG
CircID chr9:137448547|137448743
ORF Type ORF3
Protein Length 53
Nucleotide Length 162
Protein Sequence MRLVKAELNSSNESAGWAWGDGEQAPPRASSEGGDAAPFLPAAQTAPTGSGAG
Nucleotide Sequence CTGAGGCTGGTAAAAGCTGAACTCAACAGCAGCAATGAGAGTGCTGGGTGGGCTTGGGGGGATGGGGAGCAGGCCCCACCCAGAGCCTCCTCTGAAGGAGGGGACGCTGCGCCCTTCCTTCCTGCTGCCCAGACTGCCCCTACCGGGTCCGGCGCCGGCTGA
CircID chr9:137448547|137448743
ORF Type ORF4
Protein Length 49
Nucleotide Length 147
Protein Sequence MNSTAAMRVLGGLGGMGSRPHPEPPLKEGTLRPSFLLPRLPLPGPAPAE
Nucleotide Sequence CTGAACTCAACAGCAGCAATGAGAGTGCTGGGTGGGCTTGGGGGGATGGGGAGCAGGCCCCACCCAGAGCCTCCTCTGAAGGAGGGGACGCTGCGCCCTTCCTTCCTGCTGCCCAGACTGCCCCTACCGGGTCCGGCGCCGGCTGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab