CircRNA Information

General Information
circRNA Basic Information
CircID chr9:137449270|137449368
Strand +
CircType exon
Host Gene ENSG00000165802.18;
Algorism CIRI2;
Sequence CATCAGGCCACTCCCTCTGCACCGGGACCTGGGGCTGGGCCGCCTCGTGCTCCCCGGGACTGTGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:137449270|137449368 hsa-miR-573 0 0 1
chr9:137449270|137449368 hsa-miR-874-5p 0 0 1
chr9:137449270|137449368 hsa-miR-874-3p 0 0 1
chr9:137449270|137449368 hsa-miR-939-5p 0 0 1
chr9:137449270|137449368 hsa-miR-939-3p 0 0 1
chr9:137449270|137449368 hsa-miR-1203 0 1 1
chr9:137449270|137449368 hsa-miR-146b-3p 0 0 1
chr9:137449270|137449368 hsa-miR-1201 0 0 1
chr9:137449270|137449368 hsa-miR-638 1 0 0
chr9:137449270|137449368 hsa-miR-658 0 1 0
chr9:137449270|137449368 hsa-miR-663b 1 0 0
chr9:137449270|137449368 hsa-miR-548q 0 1 0
chr9:137449270|137449368 hsa-miR-4281 1 1 0
chr9:137449270|137449368 hsa-miR-4449 1 1 0
chr9:137449270|137449368 hsa-miR-4510 0 1 0
chr9:137449270|137449368 hsa-miR-6090 0 1 0
chr9:137449270|137449368 hsa-miR-6127 0 1 0
chr9:137449270|137449368 hsa-miR-6129 0 1 0
chr9:137449270|137449368 hsa-miR-6130 0 1 0
chr9:137449270|137449368 hsa-miR-6840-3p 1 0 0
chr9:137449270|137449368 hsa-miR-4726-3p 0 1 0
chr9:137449270|137449368 hsa-miR-6765-5p 1 0 0
chr9:137449270|137449368 hsa-miR-6089 1 0 0
chr9:137449270|137449368 hsa-miR-4722-5p 1 0 0
chr9:137449270|137449368 hsa-miR-505-5p 0 1 0
chr9:137449270|137449368 hsa-miR-6776-5p 1 0 0
chr9:137449270|137449368 hsa-miR-6772-5p 1 0 0
chr9:137449270|137449368 hsa-miR-2467-3p 0 1 0
chr9:137449270|137449368 hsa-miR-345-3p 0 1 0
chr9:137449270|137449368 hsa-miR-6786-5p 1 0 0
chr9:137449270|137449368 hsa-miR-4783-3p 1 1 0
chr9:137449270|137449368 hsa-miR-1250-5p 1 0 0
chr9:137449270|137449368 hsa-miR-1343-5p 1 0 0
chr9:137449270|137449368 hsa-miR-328-5p 1 1 0
chr9:137449270|137449368 hsa-miR-6729-5p 1 0 0
chr9:137449270|137449368 hsa-miR-675-5p 1 0 0
chr9:137449270|137449368 hsa-miR-6777-5p 0 1 0
chr9:137449270|137449368 hsa-miR-6889-5p 1 1 0
chr9:137449270|137449368 hsa-miR-4667-5p 0 1 0
chr9:137449270|137449368 hsa-miR-10394-5p 1 0 0
chr9:137449270|137449368 hsa-miR-6500-5p 0 1 0
chr9:137449270|137449368 hsa-miR-6764-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr9:137449270|137449368
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MHRDLGLGRLVLPGTVWLRSRLEPLQG
Nucleotide Sequence CTGCACCGGGACCTGGGGCTGGGCCGCCTCGTGCTCCCCGGGACTGTGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGC

CircID chr9:137449270|137449368
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MKWLQARPEPHSPGEHEAAQPQVPVQREWPD
Nucleotide Sequence CTGAAGTGGCTCCAGGCGAGACCGGAGCCACACAGTCCCGGGGAGCACGAGGCGGCCCAGCCCCAGGTCCCGGTGCAGAGGGAGTGGCCTGAT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites