CircRNA Information

General Information
circRNA Basic Information
CircID chr9:137449957|137450222
Strand +
CircType exon
Host Gene ENSG00000165802.18;
Algorism CIRI2;
Sequence AAGGTGGCCACCTTTGCCAAAGTGGAGAAGGAAGAGGACATGATTCAGTGAGAAGCCGGGTGCCCTGGGCGCGGGGAGGGCTGGAGGCAGAGTCCAGGCCCTGGCATGTCCCTCCCCCACAGCCCCTCCTCCACGGTCCGCTCTGTGGAGTGGGGTGCCTGTCCCCTGCCACTGGGTGACCCACCCCTCTCCACCAGCTTCTGGAAGCGGCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGCCGAACGTCATCCACATCATGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:137449957|137450222 hsa-miR-96-5p 0 0 1
chr9:137449957|137450222 hsa-miR-96-3p 0 0 1
chr9:137449957|137450222 hsa-miR-182-5p 0 0 1
chr9:137449957|137450222 hsa-miR-182-3p 0 0 1
chr9:137449957|137450222 hsa-miR-185-5p 0 0 1
chr9:137449957|137450222 hsa-miR-185-3p 0 0 1
chr9:137449957|137450222 hsa-miR-326 0 0 1
chr9:137449957|137450222 hsa-miR-422a 0 0 1
chr9:137449957|137450222 hsa-miR-588 0 0 1
chr9:137449957|137450222 hsa-miR-608 1 0 1
chr9:137449957|137450222 hsa-miR-625-5p 0 0 1
chr9:137449957|137450222 hsa-miR-625-3p 0 0 1
chr9:137449957|137450222 hsa-miR-1271-5p 0 0 1
chr9:137449957|137450222 hsa-miR-1271-3p 0 0 1
chr9:137449957|137450222 hsa-miR-766-5p 0 0 1
chr9:137449957|137450222 hsa-miR-766-3p 0 0 1
chr9:137449957|137450222 hsa-miR-765 0 0 1
chr9:137449957|137450222 hsa-miR-760 1 0 1
chr9:137449957|137450222 hsa-miR-1178-5p 0 0 1
chr9:137449957|137450222 hsa-miR-1178-3p 0 0 1
chr9:137449957|137450222 hsa-miR-1229-5p 0 0 1
chr9:137449957|137450222 hsa-miR-1229-3p 0 0 1
chr9:137449957|137450222 hsa-miR-1236-5p 0 0 1
chr9:137449957|137450222 hsa-miR-1236-3p 0 0 1
chr9:137449957|137450222 hsa-miR-1237-5p 0 0 1
chr9:137449957|137450222 hsa-miR-1237-3p 0 0 1
chr9:137449957|137450222 hsa-miR-1248 0 0 1
chr9:137449957|137450222 hsa-miR-1255a 0 0 1
chr9:137449957|137450222 hsa-miR-1275 0 0 1
chr9:137449957|137450222 hsa-miR-491-5p 0 0 1
chr9:137449957|137450222 hsa-miR-941 0 0 1
chr9:137449957|137450222 hsa-miR-423-5p 0 0 1
chr9:137449957|137450222 hsa-miR-525-5p 0 0 1
chr9:137449957|137450222 hsa-miR-1207-5p 0 0 1
chr9:137449957|137450222 hsa-miR-520a-5p 0 0 1
chr9:137449957|137450222 hsa-miR-330-5p 1 0 1
chr9:137449957|137450222 hsa-miR-515-5p 0 0 1
chr9:137449957|137450222 hsa-miR-1255b 0 0 1
chr9:137449957|137450222 hsa-miR-378 0 0 1
chr9:137449957|137450222 hsa-miR-138 0 0 1
chr9:137449957|137450222 hsa-miR-1254 0 0 1
chr9:137449957|137450222 hsa-miR-24 0 0 1
chr9:137449957|137450222 hsa-miR-638 1 0 0
chr9:137449957|137450222 hsa-miR-663a 1 0 0
chr9:137449957|137450222 hsa-miR-762 1 0 0
chr9:137449957|137450222 hsa-miR-298 1 0 0
chr9:137449957|137450222 hsa-miR-1263 1 0 0
chr9:137449957|137450222 hsa-miR-1470 1 0 0
chr9:137449957|137450222 hsa-miR-3141 1 0 0
chr9:137449957|137450222 hsa-miR-3937 1 0 0
chr9:137449957|137450222 hsa-miR-3972 1 0 0
chr9:137449957|137450222 hsa-miR-4651 1 0 0
chr9:137449957|137450222 hsa-miR-4706 1 0 0
chr9:137449957|137450222 hsa-miR-4739 1 0 0
chr9:137449957|137450222 hsa-miR-4741 1 0 0
chr9:137449957|137450222 hsa-miR-6069 1 0 0
chr9:137449957|137450222 hsa-miR-4433b-3p 1 0 0
chr9:137449957|137450222 hsa-miR-3194-3p 1 0 0
chr9:137449957|137450222 hsa-miR-6836-3p 1 0 0
chr9:137449957|137450222 hsa-miR-6861-5p 1 0 0
chr9:137449957|137450222 hsa-miR-7106-5p 1 0 0
chr9:137449957|137450222 hsa-miR-6825-5p 1 0 0
chr9:137449957|137450222 hsa-miR-6822-3p 1 0 0
chr9:137449957|137450222 hsa-miR-4687-3p 1 0 0
chr9:137449957|137450222 hsa-miR-27a-5p 1 0 0
chr9:137449957|137450222 hsa-miR-29b-2-5p 1 0 0
chr9:137449957|137450222 hsa-miR-8071 1 0 0
chr9:137449957|137450222 hsa-miR-7114-5p 1 0 0
chr9:137449957|137450222 hsa-miR-6089 1 0 0
chr9:137449957|137450222 hsa-miR-4722-5p 1 0 0
chr9:137449957|137450222 hsa-miR-433-3p 1 0 0
chr9:137449957|137450222 hsa-miR-1915-5p 1 0 0
chr9:137449957|137450222 hsa-miR-6742-5p 1 0 0
chr9:137449957|137450222 hsa-miR-2467-3p 1 0 0
chr9:137449957|137450222 hsa-miR-6782-5p 1 0 0
chr9:137449957|137450222 hsa-miR-6728-3p 1 0 0
chr9:137449957|137450222 hsa-miR-6882-3p 1 0 0
chr9:137449957|137450222 hsa-miR-939-3p 1 0 0
chr9:137449957|137450222 hsa-miR-7109-5p 1 0 0
chr9:137449957|137450222 hsa-miR-6753-5p 1 0 0
chr9:137449957|137450222 hsa-miR-3691-5p 1 0 0
chr9:137449957|137450222 hsa-miR-5001-3p 1 0 0
chr9:137449957|137450222 hsa-miR-4783-5p 1 0 0
chr9:137449957|137450222 hsa-miR-6878-3p 1 0 0
chr9:137449957|137450222 hsa-miR-4787-5p 1 0 0
chr9:137449957|137450222 hsa-miR-149-3p 1 0 0
chr9:137449957|137450222 hsa-miR-6824-5p 1 0 0
chr9:137449957|137450222 hsa-miR-4800-5p 1 0 0
chr9:137449957|137450222 hsa-miR-3681-5p 1 0 0
chr9:137449957|137450222 hsa-miR-6804-3p 1 0 0
chr9:137449957|137450222 hsa-miR-1296-5p 1 0 0
chr9:137449957|137450222 hsa-miR-6738-3p 1 0 0
chr9:137449957|137450222 hsa-miR-6789-3p 1 0 0
chr9:137449957|137450222 hsa-miR-4763-3p 1 0 0
chr9:137449957|137450222 hsa-miR-6816-5p 1 0 0
chr9:137449957|137450222 hsa-miR-6737-5p 1 0 0
chr9:137449957|137450222 hsa-miR-6752-5p 1 0 0
chr9:137449957|137450222 hsa-miR-6756-5p 1 0 0
chr9:137449957|137450222 hsa-miR-6803-5p 1 0 0
chr9:137449957|137450222 hsa-miR-6819-5p 1 0 0
chr9:137449957|137450222 hsa-miR-7110-5p 1 0 0
chr9:137449957|137450222 hsa-miR-6722-3p 1 0 0
chr9:137449957|137450222 hsa-miR-6751-5p 1 0 0
chr9:137449957|137450222 hsa-miR-6779-5p 1 0 0
chr9:137449957|137450222 hsa-miR-7111-5p 1 0 0
chr9:137449957|137450222 hsa-miR-1915-3p 1 0 0
chr9:137449957|137450222 hsa-miR-6836-5p 1 0 0
chr9:137449957|137450222 hsa-miR-10396b-5p 1 0 0
chr9:137449957|137450222 hsa-miR-1909-3p 1 0 0
chr9:137449957|137450222 hsa-miR-328-5p 1 0 0
chr9:137449957|137450222 hsa-miR-4685-5p 1 0 0
chr9:137449957|137450222 hsa-miR-4745-3p 1 0 0
chr9:137449957|137450222 hsa-miR-4745-5p 1 0 0
chr9:137449957|137450222 hsa-miR-4749-5p 1 0 0
chr9:137449957|137450222 hsa-miR-6795-5p 1 0 0
chr9:137449957|137450222 hsa-miR-6848-5p 1 0 0
chr9:137449957|137450222 hsa-miR-6858-5p 1 0 0
chr9:137449957|137450222 hsa-miR-1266-5p 1 0 0
chr9:137449957|137450222 hsa-miR-4664-5p 1 0 0
chr9:137449957|137450222 hsa-miR-4722-3p 1 0 0
chr9:137449957|137450222 hsa-miR-6805-3p 1 0 0
chr9:137449957|137450222 hsa-miR-320a-3p 1 0 0
chr9:137449957|137450222 hsa-miR-320c 1 0 0
chr9:137449957|137450222 hsa-miR-4769-3p 1 0 0
chr9:137449957|137450222 hsa-miR-6737-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr9:137449957|137450222
ORF Type ORF1
Protein Length 53
Nucleotide Length 159
Protein Sequence MSLPHSPSSTVRSVEWGACPLPLGDPPLSTSFWKRLSRLMSKVNPEPNVIHIM
Nucleotide Sequence ATGTCCCTCCCCCACAGCCCCTCCTCCACGGTCCGCTCTGTGGAGTGGGGTGCCTGTCCCCTGCCACTGGGTGACCCACCCCTCTCCACCAGCTTCTGGAAGCGGCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGCCGAACGTCATCCACATCATG
CircID chr9:137449957|137450222
ORF Type ORF2
Protein Length 49
Nucleotide Length 150
Protein Sequence MGAGRAGGRVQALACPSPTAPPPRSALWSGVPVPCHWVTHPSPPASGSG
Nucleotide Sequence CTGGGCGCGGGGAGGGCTGGAGGCAGAGTCCAGGCCCTGGCATGTCCCTCCCCCACAGCCCCTCCTCCACGGTCCGCTCTGTGGAGTGGGGTGCCTGTCCCCTGCCACTGGGTGACCCACCCCTCTCCACCAGCTTCTGGAAGCGGCTGA
CircID chr9:137449957|137450222
ORF Type ORF3
Protein Length 32
Nucleotide Length 99
Protein Sequence MEAESRPWHVPPPQPLLHGPLCGVGCLSPATG
Nucleotide Sequence CTGGAGGCAGAGTCCAGGCCCTGGCATGTCCCTCCCCCACAGCCCCTCCTCCACGGTCCGCTCTGTGGAGTGGGGTGCCTGTCCCCTGCCACTGGGTGA
CircID chr9:137449957|137450222
ORF Type ORF4
Protein Length 72
Nucleotide Length 219
Protein Sequence MMWMTFGSGFTLLIRRLSRFQKLVERGGSPSGRGQAPHSTERTVEEGLWGRDMPGPGLCLQPSPRPGHPASH
Nucleotide Sequence ATGATGTGGATGACGTTCGGCTCTGGGTTCACTTTGCTCATCAGGCGGCTCAGCCGCTTCCAGAAGCTGGTGGAGAGGGGTGGGTCACCCAGTGGCAGGGGACAGGCACCCCACTCCACAGAGCGGACCGTGGAGGAGGGGCTGTGGGGGAGGGACATGCCAGGGCCTGGACTCTGCCTCCAGCCCTCCCCGCGCCCAGGGCACCCGGCTTCTCACTGA
CircID chr9:137449957|137450222
ORF Type ORF5
Protein Length 80
Nucleotide Length 240
Protein Sequence MGSLCSSGGSAASRSWWRGVGHPVAGDRHPTPQSGPWRRGCGGGTCQGLDSASSPPRAQGTRLLTESCPLPSPLWQRWPP
Nucleotide Sequence CTGGGTTCACTTTGCTCATCAGGCGGCTCAGCCGCTTCCAGAAGCTGGTGGAGAGGGGTGGGTCACCCAGTGGCAGGGGACAGGCACCCCACTCCACAGAGCGGACCGTGGAGGAGGGGCTGTGGGGGAGGGACATGCCAGGGCCTGGACTCTGCCTCCAGCCCTCCCCGCGCCCAGGGCACCCGGCTTCTCACTGAATCATGTCCTCTTCCTTCTCCACTTTGGCAAAGGTGGCCACCT
CircID chr9:137449957|137450222
ORF Type ORF6
Protein Length 30
Nucleotide Length 90
Protein Sequence MPPALPAPRAPGFSLNHVLFLLHFGKGGHL
Nucleotide Sequence CTGCCTCCAGCCCTCCCCGCGCCCAGGGCACCCGGCTTCTCACTGAATCATGTCCTCTTCCTTCTCCACTTTGGCAAAGGTGGCCACCTT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab