CircRNA Information

General Information
circRNA Basic Information
CircID chr9:137611993|137612110
Strand +
CircType exon
Host Gene ENSG00000197070.12;
Algorism CIRI2;
Sequence ACACAGCACAAGACCCAGGTGGGCAGGGGTTGGGGGAGACAGTGGCAGGCCACCTGCACCTCCAGCCCCTCTTCTCCCTGCAGGGCTGAGTCAGGGCCAAAGATGGCCACCTCCCTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:137611993|137612110 hsa-miR-328-5p 0 0 1
chr9:137611993|137612110 hsa-miR-328-3p 0 0 1
chr9:137611993|137612110 hsa-miR-345-5p 0 0 1
chr9:137611993|137612110 hsa-miR-345-3p 0 0 1
chr9:137611993|137612110 hsa-miR-581 0 0 1
chr9:137611993|137612110 hsa-miR-657 0 0 1
chr9:137611993|137612110 hsa-miR-1205 0 0 1
chr9:137611993|137612110 hsa-miR-1291 1 1 1
chr9:137611993|137612110 hsa-miR-1253 0 0 1
chr9:137611993|137612110 hsa-miR-1321 0 1 1
chr9:137611993|137612110 hsa-miR-512-5p 0 1 1
chr9:137611993|137612110 hsa-miR-193a-5p 0 0 1
chr9:137611993|137612110 hsa-miR-423-5p 0 0 1
chr9:137611993|137612110 hsa-miR-361-3p 0 0 1
chr9:137611993|137612110 hsa-miR-1224-3p 0 0 1
chr9:137611993|137612110 hsa-miR-9 0 0 1
chr9:137611993|137612110 hsa-miR-218 0 0 1
chr9:137611993|137612110 hsa-miR-661 0 1 0
chr9:137611993|137612110 hsa-miR-762 0 1 0
chr9:137611993|137612110 hsa-miR-1976 0 1 0
chr9:137611993|137612110 hsa-miR-3154 0 1 0
chr9:137611993|137612110 hsa-miR-4270 0 1 0
chr9:137611993|137612110 hsa-miR-3652 0 1 0
chr9:137611993|137612110 hsa-miR-4430 0 1 0
chr9:137611993|137612110 hsa-miR-4441 0 1 0
chr9:137611993|137612110 hsa-miR-3135b 0 1 0
chr9:137611993|137612110 hsa-miR-4492 0 1 0
chr9:137611993|137612110 hsa-miR-4498 0 1 0
chr9:137611993|137612110 hsa-miR-4656 1 1 0
chr9:137611993|137612110 hsa-miR-4706 0 1 0
chr9:137611993|137612110 hsa-miR-4739 0 1 0
chr9:137611993|137612110 hsa-miR-5572 1 0 0
chr9:137611993|137612110 hsa-miR-6085 0 1 0
chr9:137611993|137612110 hsa-miR-210-5p 1 1 0
chr9:137611993|137612110 hsa-miR-150-5p 0 1 0
chr9:137611993|137612110 hsa-miR-3677-5p 1 0 0
chr9:137611993|137612110 hsa-miR-24-3p 0 1 0
chr9:137611993|137612110 hsa-miR-6798-5p 0 1 0
chr9:137611993|137612110 hsa-miR-6760-5p 0 1 0
chr9:137611993|137612110 hsa-miR-6735-3p 0 1 0
chr9:137611993|137612110 hsa-miR-937-5p 1 0 0
chr9:137611993|137612110 hsa-miR-3162-5p 0 1 0
chr9:137611993|137612110 hsa-miR-4732-3p 0 1 0
chr9:137611993|137612110 hsa-miR-6793-3p 1 1 0
chr9:137611993|137612110 hsa-miR-500a-5p 0 1 0
chr9:137611993|137612110 hsa-miR-6773-3p 0 1 0
chr9:137611993|137612110 hsa-miR-6760-3p 0 1 0
chr9:137611993|137612110 hsa-miR-6865-5p 0 1 0
chr9:137611993|137612110 hsa-miR-6754-5p 0 1 0
chr9:137611993|137612110 hsa-miR-6813-5p 0 1 0
chr9:137611993|137612110 hsa-miR-6851-5p 0 1 0
chr9:137611993|137612110 hsa-miR-6788-5p 0 1 0
chr9:137611993|137612110 hsa-miR-6846-5p 0 1 0
chr9:137611993|137612110 hsa-miR-6511a-5p 0 1 0
chr9:137611993|137612110 hsa-miR-6511b-5p 0 1 0
chr9:137611993|137612110 hsa-miR-6799-3p 0 1 0
chr9:137611993|137612110 hsa-miR-3689d 0 1 0
chr9:137611993|137612110 hsa-miR-4722-3p 0 1 0
chr9:137611993|137612110 hsa-miR-6727-3p 0 1 0
chr9:137611993|137612110 hsa-miR-6792-3p 0 1 0
chr9:137611993|137612110 hsa-miR-6801-3p 0 1 0
chr9:137611993|137612110 hsa-miR-6810-3p 0 1 0
chr9:137611993|137612110 hsa-miR-6775-3p 0 1 0
chr9:137611993|137612110 hsa-miR-4756-5p 0 1 0
chr9:137611993|137612110 hsa-miR-6771-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr9:137611993|137612110
ORF Type ORF1
Protein Length 33
Nucleotide Length 99
Protein Sequence MALTQPCREKRGWRCRWPATVSPNPCPPGSCAV
Nucleotide Sequence TTGGCCCTGACTCAGCCCTGCAGGGAGAAGAGGGGCTGGAGGTGCAGGTGGCCTGCCACTGTCTCCCCCAACCCCTGCCCACCTGGGTCTTGTGCTGTG
CircID chr9:137611993|137612110
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MQGEEGLEVQVACHCLPQPLPTWVLCC
Nucleotide Sequence CTGCAGGGAGAAGAGGGGCTGGAGGTGCAGGTGGCCTGCCACTGTCTCCCCCAACCCCTGCCCACCTGGGTCTTGTGCTGT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab