CircNet

General Information

circRNA Basic Information

CircID	chr9:28295208\|28295354
Strand	-
CircType	exon
Host Gene	ENSG00000174482.9;
Algorism	CIRI2;
Sequence	CTGGTTTACTCTTTTGAAAAATCCAACCCTTGCCGTCTCCCACACAAAGCTCTTGGCCACTGGGTGAAATCCAAGCTGGGTAGTTGATCATGATAATTCCCGCATGTCATGGGCAGCAGCATCTCTCAGAGTCCCACAAGCCAACTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr9:28295208\|28295354	hsa-miR-335-5p	0	0	1
chr9:28295208\|28295354	hsa-miR-335-3p	0	0	1
chr9:28295208\|28295354	hsa-miR-433-5p	0	0	1
chr9:28295208\|28295354	hsa-miR-433-3p	0	0	1
chr9:28295208\|28295354	hsa-miR-599	0	0	1
chr9:28295208\|28295354	hsa-miR-607	0	0	1
chr9:28295208\|28295354	hsa-miR-1290	0	0	1
chr9:28295208\|28295354	hsa-miR-1305	0	0	1
chr9:28295208\|28295354	hsa-miR-296-3p	0	1	1
chr9:28295208\|28295354	hsa-miR-876-5p	0	0	1
chr9:28295208\|28295354	hsa-miR-644	0	0	1
chr9:28295208\|28295354	hsa-miR-147	0	0	1
chr9:28295208\|28295354	hsa-miR-4538	0	1	0
chr9:28295208\|28295354	hsa-miR-4641	0	1	0
chr9:28295208\|28295354	hsa-miR-500b-3p	0	1	0
chr9:28295208\|28295354	hsa-miR-4708-5p	0	1	0
chr9:28295208\|28295354	hsa-miR-139-3p	1	1	0
chr9:28295208\|28295354	hsa-miR-6833-5p	1	0	0
chr9:28295208\|28295354	hsa-miR-7847-3p	1	0	0
chr9:28295208\|28295354	hsa-miR-3677-5p	0	1	0
chr9:28295208\|28295354	hsa-miR-6796-5p	1	1	0
chr9:28295208\|28295354	hsa-miR-6782-5p	1	0	0
chr9:28295208\|28295354	hsa-miR-542-5p	0	1	0
chr9:28295208\|28295354	hsa-miR-4640-5p	1	0	0
chr9:28295208\|28295354	hsa-miR-5004-3p	0	1	0
chr9:28295208\|28295354	hsa-miR-664b-5p	1	0	0
chr9:28295208\|28295354	hsa-miR-6761-5p	0	1	0
chr9:28295208\|28295354	hsa-miR-1233-5p	1	1	0
chr9:28295208\|28295354	hsa-miR-4763-3p	1	0	0
chr9:28295208\|28295354	hsa-miR-6778-5p	1	1	0
chr9:28295208\|28295354	hsa-miR-6870-5p	1	0	0
chr9:28295208\|28295354	hsa-miR-10401-5p	1	1	0
chr9:28295208\|28295354	hsa-miR-6722-3p	1	0	0
chr9:28295208\|28295354	hsa-miR-6779-5p	1	1	0
chr9:28295208\|28295354	hsa-miR-6780b-5p	1	0	0
chr9:28295208\|28295354	hsa-miR-4649-5p	1	0	0
chr9:28295208\|28295354	hsa-miR-4685-5p	1	0	0
chr9:28295208\|28295354	hsa-miR-6794-5p	1	0	0
chr9:28295208\|28295354	hsa-miR-6795-5p	1	0	0
chr9:28295208\|28295354	hsa-miR-4758-5p	1	0	0
chr9:28295208\|28295354	hsa-miR-365b-5p	0	1	0
chr9:28295208\|28295354	hsa-miR-6731-5p	1	0	0
chr9:28295208\|28295354	hsa-miR-4665-5p	1	0	0
chr9:28295208\|28295354	hsa-miR-6849-5p	1	0	0
chr9:28295208\|28295354	hsa-miR-6718-5p	0	1	0
chr9:28295208\|28295354	hsa-miR-4482-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr9:28295208\|28295354
ORF Type	ORF1
Protein Length	28
Nucleotide Length	87
Protein Sequence	LVYSFEKSNPCRLPHKALGHWVKSKLGS
Nucleotide Sequence	CTGGTTTACTCTTTTGAAAAATCCAACCCTTGCCGTCTCCCACACAAAGCTCTTGGCCACTGGGTGAAATCCAAGCTGGGTAGTTGA

CircID	chr9:28295208\|28295354
ORF Type	ORF2
Protein Length	38
Nucleotide Length	117
Protein Sequence	MLLPMTCGNYHDQLPSLDFTQWPRALCGRRQGLDFSKE
Nucleotide Sequence	ATGCTGCTGCCCATGACATGCGGGAATTATCATGATCAACTACCCAGCTTGGATTTCACCCAGTGGCCAAGAGCTTTGTGTGGGAGACGGCAAGGGTTGGATTTTTCAAAAGAGTAA

CircID	chr9:28295208\|28295354
ORF Type	ORF3
Protein Length	30
Nucleotide Length	90
Protein Sequence	MINYPAWISPSGQELCVGDGKGWIFQKSKP
Nucleotide Sequence	ATGATCAACTACCCAGCTTGGATTTCACCCAGTGGCCAAGAGCTTTGTGTGGGAGACGGCAAGGGTTGGATTTTTCAAAAGAGTAAACCA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information