CircRNA Information

General Information
circRNA Basic Information
CircID chr9:33441706|33442034
Strand -
CircType exon
Host Gene ENSG00000165272.13;
Algorism CIRI2;
Sequence CCCCCCCACACACACACACCCCTGCACACACATGCACACACATGCACACACATGCACACACACACATACCTGCTGCCCATTCTCTTCCCTTGGGAGACAAAAGGATGTATTGACCCAAATTCCGGTTCCACCCCAGCTTAGGGGCAGTGGCCTAAGGTGCTATTTGGGCAAGGTCCAGTGGAAATCCTGAAGGGGCTGTCTCGTGGGGTGAGGGTAGATAGGGAGCTCCTTAGCCTGAAAGGGTGGATCGTGAAGGGGGCTTCTTGGGAGTGGCCCTTGGACAGTCAGTGGATGCTCAAGGCCAGGGCAGCGGAGTGGGGAGATGGCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:33441706|33442034 hsa-miR-29a-5p 0 0 1
chr9:33441706|33442034 hsa-miR-29a-3p 0 0 1
chr9:33441706|33442034 hsa-miR-214-5p 0 0 1
chr9:33441706|33442034 hsa-miR-214-3p 0 0 1
chr9:33441706|33442034 hsa-miR-150-5p 0 0 1
chr9:33441706|33442034 hsa-miR-150-3p 0 0 1
chr9:33441706|33442034 hsa-miR-29c-5p 0 0 1
chr9:33441706|33442034 hsa-miR-29c-3p 0 0 1
chr9:33441706|33442034 hsa-miR-484 0 0 1
chr9:33441706|33442034 hsa-miR-492 0 0 1
chr9:33441706|33442034 hsa-miR-608 1 0 1
chr9:33441706|33442034 hsa-miR-874-5p 0 0 1
chr9:33441706|33442034 hsa-miR-874-3p 0 0 1
chr9:33441706|33442034 hsa-miR-708-5p 0 0 1
chr9:33441706|33442034 hsa-miR-708-3p 0 0 1
chr9:33441706|33442034 hsa-miR-943 0 0 1
chr9:33441706|33442034 hsa-miR-491-5p 0 0 1
chr9:33441706|33442034 hsa-miR-532-3p 0 0 1
chr9:33441706|33442034 hsa-miR-146b-3p 0 0 1
chr9:33441706|33442034 hsa-miR-501-5p 0 0 1
chr9:33441706|33442034 hsa-miR-28-5p 0 1 1
chr9:33441706|33442034 hsa-miR-324-3p 1 0 1
chr9:33441706|33442034 hsa-miR-342-5p 0 0 1
chr9:33441706|33442034 hsa-miR-876-5p 0 0 1
chr9:33441706|33442034 hsa-miR-644 0 0 1
chr9:33441706|33442034 hsa-miR-1295 0 0 1
chr9:33441706|33442034 hsa-miR-147 0 0 1
chr9:33441706|33442034 hsa-miR-29b 0 0 1
chr9:33441706|33442034 hsa-miR-346 1 0 0
chr9:33441706|33442034 hsa-miR-572 1 0 0
chr9:33441706|33442034 hsa-miR-639 1 0 0
chr9:33441706|33442034 hsa-miR-648 1 0 0
chr9:33441706|33442034 hsa-miR-650 1 0 0
chr9:33441706|33442034 hsa-miR-933 1 0 0
chr9:33441706|33442034 hsa-miR-297 1 1 0
chr9:33441706|33442034 hsa-miR-1913 1 1 0
chr9:33441706|33442034 hsa-miR-3139 0 1 0
chr9:33441706|33442034 hsa-miR-3147 1 0 0
chr9:33441706|33442034 hsa-miR-3175 1 0 0
chr9:33441706|33442034 hsa-miR-320e 0 1 0
chr9:33441706|33442034 hsa-miR-3196 1 0 0
chr9:33441706|33442034 hsa-miR-4312 1 0 0
chr9:33441706|33442034 hsa-miR-4253 1 0 0
chr9:33441706|33442034 hsa-miR-4286 0 1 0
chr9:33441706|33442034 hsa-miR-3943 0 1 0
chr9:33441706|33442034 hsa-miR-4455 0 1 0
chr9:33441706|33442034 hsa-miR-4463 1 0 0
chr9:33441706|33442034 hsa-miR-4466 1 0 0
chr9:33441706|33442034 hsa-miR-4505 1 0 0
chr9:33441706|33442034 hsa-miR-4507 1 0 0
chr9:33441706|33442034 hsa-miR-4521 0 1 0
chr9:33441706|33442034 hsa-miR-1587 1 0 0
chr9:33441706|33442034 hsa-miR-4651 1 0 0
chr9:33441706|33442034 hsa-miR-4669 1 0 0
chr9:33441706|33442034 hsa-miR-4688 1 0 0
chr9:33441706|33442034 hsa-miR-4739 1 0 0
chr9:33441706|33442034 hsa-miR-5682 0 1 0
chr9:33441706|33442034 hsa-miR-5698 1 0 0
chr9:33441706|33442034 hsa-miR-5704 0 1 0
chr9:33441706|33442034 hsa-miR-5787 1 0 0
chr9:33441706|33442034 hsa-miR-6071 1 0 0
chr9:33441706|33442034 hsa-miR-6128 0 1 0
chr9:33441706|33442034 hsa-miR-6745 0 1 0
chr9:33441706|33442034 hsa-miR-6860 1 0 0
chr9:33441706|33442034 hsa-miR-7974 1 0 0
chr9:33441706|33442034 hsa-miR-8089 1 0 0
chr9:33441706|33442034 hsa-miR-9500 0 1 0
chr9:33441706|33442034 hsa-miR-10226 0 1 0
chr9:33441706|33442034 hsa-miR-4731-5p 0 1 0
chr9:33441706|33442034 hsa-miR-6747-5p 1 0 0
chr9:33441706|33442034 hsa-miR-4433a-3p 1 0 0
chr9:33441706|33442034 hsa-miR-210-3p 1 0 0
chr9:33441706|33442034 hsa-miR-8071 1 0 0
chr9:33441706|33442034 hsa-miR-6867-5p 1 1 0
chr9:33441706|33442034 hsa-miR-6721-5p 1 0 0
chr9:33441706|33442034 hsa-miR-197-5p 1 0 0
chr9:33441706|33442034 hsa-miR-1915-5p 1 0 0
chr9:33441706|33442034 hsa-miR-6742-5p 1 0 0
chr9:33441706|33442034 hsa-miR-3605-5p 1 1 0
chr9:33441706|33442034 hsa-miR-6716-5p 1 0 0
chr9:33441706|33442034 hsa-miR-3180-3p 1 0 0
chr9:33441706|33442034 hsa-miR-6782-5p 1 1 0
chr9:33441706|33442034 hsa-miR-4436b-5p 1 0 0
chr9:33441706|33442034 hsa-miR-4793-5p 1 0 0
chr9:33441706|33442034 hsa-miR-1229-5p 1 0 0
chr9:33441706|33442034 hsa-miR-885-3p 1 0 0
chr9:33441706|33442034 hsa-miR-1228-5p 1 1 0
chr9:33441706|33442034 hsa-miR-4787-5p 1 0 0
chr9:33441706|33442034 hsa-miR-378a-5p 1 0 0
chr9:33441706|33442034 hsa-miR-6736-3p 0 1 0
chr9:33441706|33442034 hsa-miR-6824-5p 1 0 0
chr9:33441706|33442034 hsa-miR-6769a-3p 0 1 0
chr9:33441706|33442034 hsa-miR-339-5p 1 0 0
chr9:33441706|33442034 hsa-miR-6825-3p 1 0 0
chr9:33441706|33442034 hsa-miR-574-5p 1 0 0
chr9:33441706|33442034 hsa-miR-7106-3p 1 1 0
chr9:33441706|33442034 hsa-miR-6867-3p 0 1 0
chr9:33441706|33442034 hsa-miR-1910-5p 1 0 0
chr9:33441706|33442034 hsa-miR-6814-5p 0 1 0
chr9:33441706|33442034 hsa-miR-7848-3p 0 1 0
chr9:33441706|33442034 hsa-miR-6856-3p 0 1 0
chr9:33441706|33442034 hsa-miR-6777-3p 0 1 0
chr9:33441706|33442034 hsa-miR-937-3p 1 0 0
chr9:33441706|33442034 hsa-miR-6883-3p 1 1 0
chr9:33441706|33442034 hsa-miR-4717-5p 0 1 0
chr9:33441706|33442034 hsa-miR-6509-3p 0 1 0
chr9:33441706|33442034 hsa-miR-4763-3p 1 0 0
chr9:33441706|33442034 hsa-miR-6787-5p 1 0 0
chr9:33441706|33442034 hsa-miR-6812-5p 1 1 0
chr9:33441706|33442034 hsa-miR-3180 1 0 0
chr9:33441706|33442034 hsa-miR-6737-5p 1 0 0
chr9:33441706|33442034 hsa-miR-6743-5p 1 0 0
chr9:33441706|33442034 hsa-miR-6752-5p 1 0 0
chr9:33441706|33442034 hsa-miR-6756-5p 1 1 0
chr9:33441706|33442034 hsa-miR-6803-5p 1 0 0
chr9:33441706|33442034 hsa-miR-6819-5p 1 1 0
chr9:33441706|33442034 hsa-miR-6842-5p 1 0 0
chr9:33441706|33442034 hsa-miR-7110-5p 1 0 0
chr9:33441706|33442034 hsa-miR-6722-3p 1 1 0
chr9:33441706|33442034 hsa-miR-6751-5p 1 0 0
chr9:33441706|33442034 hsa-miR-6808-5p 1 0 0
chr9:33441706|33442034 hsa-miR-3127-3p 0 1 0
chr9:33441706|33442034 hsa-miR-4685-3p 1 0 0
chr9:33441706|33442034 hsa-miR-3620-5p 1 0 0
chr9:33441706|33442034 hsa-miR-5196-5p 1 0 0
chr9:33441706|33442034 hsa-miR-1909-3p 1 0 0
chr9:33441706|33442034 hsa-miR-4632-5p 1 0 0
chr9:33441706|33442034 hsa-miR-6735-5p 1 0 0
chr9:33441706|33442034 hsa-miR-3187-5p 1 0 0
chr9:33441706|33442034 hsa-miR-1238-5p 1 0 0
chr9:33441706|33442034 hsa-miR-4758-5p 1 0 0
chr9:33441706|33442034 hsa-miR-6790-5p 1 0 0
chr9:33441706|33442034 hsa-miR-6893-3p 1 0 0
chr9:33441706|33442034 hsa-miR-6784-3p 1 1 0
chr9:33441706|33442034 hsa-miR-6862-3p 0 1 0
chr9:33441706|33442034 hsa-miR-3619-5p 0 1 0
chr9:33441706|33442034 hsa-miR-3922-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr9:33441706|33442034
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence MHTHAHTCTHMHTHTYLLPILFPWETKGCIDPNSGSTPA
Nucleotide Sequence CTGCACACACATGCACACACATGCACACACATGCACACACACACATACCTGCTGCCCATTCTCTTCCCTTGGGAGACAAAAGGATGTATTGACCCAAATTCCGGTTCCACCCCAGCTTAG

CircID chr9:33441706|33442034
ORF Type ORF2
Protein Length 47
Nucleotide Length 141
Protein Sequence MKGLSRGVRVDRELLSLKGWIVKGASWEWPLDSQWMLKARAAEWGDG
Nucleotide Sequence CTGAAGGGGCTGTCTCGTGGGGTGAGGGTAGATAGGGAGCTCCTTAGCCTGAAAGGGTGGATCGTGAAGGGGGCTTCTTGGGAGTGGCCCTTGGACAGTCAGTGGATGCTCAAGGCCAGGGCAGCGGAGTGGGGAGATGGC

CircID chr9:33441706|33442034
ORF Type ORF3
Protein Length 52
Nucleotide Length 159
Protein Sequence MHTHAHTCTHTHTCCPFSSLGRQKDVLTQIPVPPQLRGSGLRCYLGKVQWKS
Nucleotide Sequence ATGCACACACATGCACACACATGCACACACACACATACCTGCTGCCCATTCTCTTCCCTTGGGAGACAAAAGGATGTATTGACCCAAATTCCGGTTCCACCCCAGCTTAGGGGCAGTGGCCTAAGGTGCTATTTGGGCAAGGTCCAGTGGAAATCCTGA

CircID chr9:33441706|33442034
ORF Type ORF4
Protein Length 48
Nucleotide Length 147
Protein Sequence MSKGHSQEAPFTIHPFRLRSSLSTLTPRDSPFRISTGPCPNSTLGHCP
Nucleotide Sequence CTGTCCAAGGGCCACTCCCAAGAAGCCCCCTTCACGATCCACCCTTTCAGGCTAAGGAGCTCCCTATCTACCCTCACCCCACGAGACAGCCCCTTCAGGATTTCCACTGGACCTTGCCCAAATAGCACCTTAGGCCACTGCCCCTAA

CircID chr9:33441706|33442034
ORF Type ORF5
Protein Length 26
Nucleotide Length 78
Protein Sequence MGSRYVCVCMCVHVCACVCRGVCVWG
Nucleotide Sequence ATGGGCAGCAGGTATGTGTGTGTGTGCATGTGTGTGCATGTGTGTGCATGTGTGTGCAGGGGTGTGTGTGTGTGGGGG

CircID chr9:33441706|33442034
ORF Type ORF6
Protein Length 45
Nucleotide Length 135
Protein Sequence MGWNRNLGQYILLSPKGREWAAGMCVCACVCMCVHVCAGVCVCGG
Nucleotide Sequence CTGGGGTGGAACCGGAATTTGGGTCAATACATCCTTTTGTCTCCCAAGGGAAGAGAATGGGCAGCAGGTATGTGTGTGTGTGCATGTGTGTGCATGTGTGTGCATGTGTGTGCAGGGGTGTGTGTGTGTGGGGGG

CircID chr9:33441706|33442034
ORF Type ORF7
Protein Length 42
Nucleotide Length 129
Protein Sequence MTVQGPLPRSPLHDPPFQAKELPIYPHPTRQPLQDFHWTLPK
Nucleotide Sequence CTGACTGTCCAAGGGCCACTCCCAAGAAGCCCCCTTCACGATCCACCCTTTCAGGCTAAGGAGCTCCCTATCTACCCTCACCCCACGAGACAGCCCCTTCAGGATTTCCACTGGACCTTGCCCAAATAG

CircID chr9:33441706|33442034
ORF Type ORF8
Protein Length 49
Nucleotide Length 147
Protein Sequence MPLSWGGTGIWVNTSFCLPREENGQQVCVCVHVCACVCMCVQGCVCVGG
Nucleotide Sequence CTGCCCCTAAGCTGGGGTGGAACCGGAATTTGGGTCAATACATCCTTTTGTCTCCCAAGGGAAGAGAATGGGCAGCAGGTATGTGTGTGTGTGCATGTGTGTGCATGTGTGTGCATGTGTGTGCAGGGGTGTGTGTGTGTGGGGGGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites